Gspa014808.1
Basic Information
- Insect
- Globia sparganii
- Gene Symbol
- clz9
- Assembly
- GCA_949316385.1
- Location
- OX438662.1:15296138-15297298[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-09 3.4e-06 27.7 0.0 2 38 9 44 8 49 0.87 2 2 7.4 2.9e+03 -0.9 0.0 4 15 355 366 354 368 0.84
Sequence Information
- Coding Sequence
- ATGGCACCTAAACGAGATTATTCCAAAGAACAAATGATTAGAGCAATCGAAGAAGTACAAAGAGGAGAAAAGGTATCTGTAGCAGCTACCAAATATGGTGTCCCCAGAATAACTTTAAGAAACAAAGTTAAGGGGATAAGCCCACTGGACTGTAATTTAGGGCCTTCCACAGTGCTGTGCCAAGAAGAAGAAAATGTATTGGTCAAATGGGTTTTATTCATGGCTGAAAACCATTTTCCAGTCACTAAGGACCATTTGTTAGATAGTGcccaaaaaattattttggaaaaaaaattggatAACTGCCCGTTCACAAATAATCGCCCAGGAAAAAAATGGTTCAGTTCGTTTTTGAATCGTCATCCAGAATTGGCACAAAGAACGGCACAAAATTTGACAAAGGCCAGAGAAGACGTAACTGAAGAAGAGTTGAACCAATGGTTTGAAACAATAAAGACTTACATAGAAGGTAAAGGGTTGTCAGATGCACTAAAAGACCCTACAAGGATATATAACACCGATGAAAGTGCTTTCTACTTGCAGCCTAAAGCAGGCAGAGTACTAGTACGTAAAGGAGAAAAAAACGTTTATAGTTCCTCTGGCGATGAGAAAGAAAACTTAACGGTATTAATTACTGCCAATGCTGCAGGAGTTATAGCTCCGCCTATGATTGTTTATCCATACGAGAGAATACCGACACTCATTGTCAAGAGTGTGCCTCGTGGATGGGGCATAGGGCGGTCGGAAACAGGATGGATGTGTGCAAAGACATTCTACGAATTTATCACCAATGTTTTTAACCCATGGCTTATACAAAAAGAGATACCAAAAccagtgattttttttctggaCGGGCATAAGTCCCACATGTCGTTGCACCTTGCAAACTTTTGCAGAGATAACGGCATAGAATTAATTGCACTTTTCCCCAATTCCACTCACTTAATTCAACCGATGGACGTGGCGGTCTTTCGGCCACTCAAAATTGCCTGGAGAGTTCAGGTCATGAAATGGAAGTCTGAAAATCCAGGTGCACGTTTGAAAAAGGAAGATTTCGCGCAAAATTTGCAAGAGGCTTTAAAAAGCATTTGCTCTGAAACCATAAAAACGGTTTTCGTAAAAGTGGCCTTTACCCATTTAGCTCGGAATATGTGGATATGA
- Protein Sequence
- MAPKRDYSKEQMIRAIEEVQRGEKVSVAATKYGVPRITLRNKVKGISPLDCNLGPSTVLCQEEENVLVKWVLFMAENHFPVTKDHLLDSAQKIILEKKLDNCPFTNNRPGKKWFSSFLNRHPELAQRTAQNLTKAREDVTEEELNQWFETIKTYIEGKGLSDALKDPTRIYNTDESAFYLQPKAGRVLVRKGEKNVYSSSGDEKENLTVLITANAAGVIAPPMIVYPYERIPTLIVKSVPRGWGIGRSETGWMCAKTFYEFITNVFNPWLIQKEIPKPVIFFLDGHKSHMSLHLANFCRDNGIELIALFPNSTHLIQPMDVAVFRPLKIAWRVQVMKWKSENPGARLKKEDFAQNLQEALKSICSETIKTVFVKVAFTHLARNMWI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01093032;
- 90% Identity
- iTF_01246786; iTF_01093032; iTF_00446066;
- 80% Identity
- -