Oiva041382.1
Basic Information
- Insect
- Oeneis ivallda
- Gene Symbol
- -
- Assembly
- GCA_029955525.1
- Location
- JARPMR010000028.1:12494009-12495976[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-11 7.7e-09 36.6 0.0 1 37 15 51 15 57 0.93
Sequence Information
- Coding Sequence
- ATGCCACGTAATTATGTGAGATCTACCTTGAGGGCAAATTGGTCTGAAACTGACTTGGAAGAGGCGATGAAAAAAGTTCGTCAGAAAGAAATGGGTGTTAATGAAGCAGCACGAATATACAATATTCCTTCAAGAACACTAAGGAGACATATTTTATCTGGAACATTGAAGGTTGGGCTTGGAAGAAAGCCTGTTTTTAACCAAACGGAGGAAAAAAAGTTGGTTGCGCACATCAAACAACTAGAAAAAGTTGGGTTTGCACCAGATCGGAAGGACGTCAAACAAATGGCTTACCAATTGGCTCAGAAGCttaatatcaaaaatattttttctgatACATACAAAAAAGCTGGAGATGTTTGGTTTAATGGATTTTTAAACAGAAACCCAGAGCTGAGTCAACGAAAATCGGAAGGTTTATCTCTTGCAAGAGCATACGGAGTTAATCGCGCGGATGTTCAGGATTTTTTTACCTTGCTGGCTCAAATATACACCGAGAATGATCTAAGCACACATCCCGAGAAGATATTCAACATGGACGAAACGGGTATCCAAGTAAATAACAAACCTGGTAAAGTAATTGCAACCAAAGGTTCTAAGGACGTTTACACGCTGACAAGCAGTGAAAAAGGAGAAAATGTCACAGTTATAGCATGTTGCAACGCACAAGGGAATTTTCTTCCACCAGTTCTAATTTATAAAGGCACATATTATAGTAAACCTCAATTTTCGGAAGGATTGCCACCAGGTTCGAAAGTGTTTATGAATAAAAAGTCATCCTACATAAACACTGATCTTTTTATGAAATGGTTTGAGGAGATTTTTTTGCCAGCTAAAGGTTCTGGAAAAGCACTGTTGATCATGGATGGACATAGTTCTCACAGCAACAATATCAGATTATTGGAAGTGGCTAAAGATAATGATGTGACGTTATTATGCTTTCCCAGTCACACTACACATGCAATGCAACCTCTGGATAGAGCTTTTTTCAGAccgttaaaagtttattttgcaCAAGAAGCTAAATCATGGATGATTATGAATGAAAACAAGAAGCTTACGAGGCACGATGTATCTAAACTTATTGGCAAAGCTTGGTGTAAAGCGGCAAGCGTATCAAACGGAGTTTCTGCTTTAAAGTCTTGTGGCATATACCCTTACGACCCAAATGCAATACCTGATCATTTTTTCGCTTTATCTGATGCCTTGCATGAACAGGATTTGATTGCTAATGAACAACACGCAGTACCATCTTCAGTCACGTTGGAGAATAGTTCAGAGCAACAAAATGTAGACGCTGTGGAAGTATCGTTGATAGATACTTTTGGTGTGGATGCTATAAACAGTCAACTTACTTCTGACGCAAATACAGAGGAATCATTAGAACAGCTTTTGACACAGCCAATTCAAGCCACTCCTCAAAAATGTCCTTCCTTACCATCTACTTCCAAGACCCCTGAACAAACACCAACAAAGGTTTTGGCTGAAATCCATCCTGTGCCGAAGTTACCTGAAATGGTTTTAAAGCGAAAACAAAGGGCAGTGATCCTGACATCaccagaaaatataaaaaaacataaaCTGATTGAAGAAAAGAAGAAACTATCGAAAACAGGTAAattatctaaaaaaaatgataaaaagaaTGTCGTAAAGAAGGATACAAAAGGAAAAAGGCCagcaaagaaaaaagcaaagaaaaataaaccaGTATTTCAATCATCGGACAGTGACAGTGAAGACGAAAATAAGCAAGAAAGTTCTGATGAAGAGATATCCGAAGAAGACAACGACAACAGATGTGTAGAATGCActgaaaattattatgaaacgACATCAACAGAAGATTGGATTAAGTGCTCTTCTTGCTCTTTTTGGCTGCACGAGTTCTGTACAATGTACAAACCGTTGTGTAATAGTTGTGGTAAAAAAGCTAAGAGAGAGAAGCTATCACGAAGCAAAAAATAG
- Protein Sequence
- MPRNYVRSTLRANWSETDLEEAMKKVRQKEMGVNEAARIYNIPSRTLRRHILSGTLKVGLGRKPVFNQTEEKKLVAHIKQLEKVGFAPDRKDVKQMAYQLAQKLNIKNIFSDTYKKAGDVWFNGFLNRNPELSQRKSEGLSLARAYGVNRADVQDFFTLLAQIYTENDLSTHPEKIFNMDETGIQVNNKPGKVIATKGSKDVYTLTSSEKGENVTVIACCNAQGNFLPPVLIYKGTYYSKPQFSEGLPPGSKVFMNKKSSYINTDLFMKWFEEIFLPAKGSGKALLIMDGHSSHSNNIRLLEVAKDNDVTLLCFPSHTTHAMQPLDRAFFRPLKVYFAQEAKSWMIMNENKKLTRHDVSKLIGKAWCKAASVSNGVSALKSCGIYPYDPNAIPDHFFALSDALHEQDLIANEQHAVPSSVTLENSSEQQNVDAVEVSLIDTFGVDAINSQLTSDANTEESLEQLLTQPIQATPQKCPSLPSTSKTPEQTPTKVLAEIHPVPKLPEMVLKRKQRAVILTSPENIKKHKLIEEKKKLSKTGKLSKKNDKKNVVKKDTKGKRPAKKKAKKNKPVFQSSDSDSEDENKQESSDEEISEEDNDNRCVECTENYYETTSTEDWIKCSSCSFWLHEFCTMYKPLCNSCGKKAKREKLSRSKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00032836; iTF_00825536; iTF_00147242; iTF_00032843; iTF_00032837; iTF_00032838; iTF_00032839; iTF_00032844;
- 90% Identity
- iTF_00147242; iTF_00032837; iTF_00032838; iTF_00032839; iTF_00032844; iTF_00032843;
- 80% Identity
- -