Aleu023793.1
Basic Information
- Insect
- Agriopis leucophaearia
- Gene Symbol
- -
- Assembly
- GCA_949125355.1
- Location
- OX421287.1:8556589-8558544[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-10 1.6e-07 31.6 0.0 1 37 15 51 15 55 0.95 2 2 2.7 2e+03 -0.7 0.0 22 30 142 150 131 151 0.78
Sequence Information
- Coding Sequence
- ATGCCACGAAATTATGTGAGATCTACCTTGCGGGCATCTTGGTCTGAAACTGACCTGGACGAGGCCATGAAAAAAGTTCGTCAGAAAGAAATAGGTGTTAATGAGGCAGCACGTACATACAATATTCCTTCAAGAACACTTAGAAGACATATTTTGGCTGGAACATTGAAGGTTGGGCTTGGAAGAAGGCCTGTTTTTAACCAAGCGGAGGAAAAAAAGTTGGTTGCGCACATCAAACAACTCGAAAAAGTTGGATTTGCACCAGATCGGAAGGATGTCAAAGAAATGGCGTATCAATTAGCCCACAAGCTTAACATCAAACATATTTTCTCTGATACGTCTAAAAGAGCTGGTGATGTTTGGTTTACTGGATTTTTAAACAGGAACCCAGAGCTGAGCCAACGAAAATCCGAAGGTTTATCTCTTGCAAGAGCATACGGAGTTAATCGCGCCGATGTCCAAGACTTTTTTAACTTGCTGGCTCAAATATACACCAAAAATTATCTAAGCACACATCCCGAGAAGATATTCAACATGGATGAAACGGGTATCCAAGTGAACAACAAACCTGGTAAAGTAATTGCAACAAAAGGGTCTAAGGACGTGTACACGCTGACAAGCAGTGAAAAAGGAGAAAATGTCACAGTTATAGCATGTTGCAACGCACAAGGGAATTTTCTTCCACCAGTTCTAATTTACAAAGGCACATATAGTAAACCTCAATTTTCGGAAGGTTTGCCGCCTGGTTCGCAAgtgtttatgaataaaaaatcatcCTACATAAACACTGATCTTTTTATGAAATGGTTTGAGGAGATTTTTTTGCCAGCAAAAGGTCCTGGAAAAGCATTGTTGATCATGGATGGGCATAGTTCTCACAGCAACAATATCAGATTATTGGAAGTGGCTAAAGATAATGATGTGACTTTATTATGCTTTCCCAGTCACACTACACATGCAATGCAACCTCTGGACAGAGCTTTCTTCAGACCGTTTAAAGTATATTTTGCGCAAGAAGCCAAATCATGGATGATCATGAACAAAAACAAGAAGCTTACGAGGTACGATGTATCCAAACTTATTGGCAAAGCTTGGTGTAAAGCGGCAAGCGTATCCAACGGAGTGTCTTCTTTAAAATCTTGCGGTATATACCCTTACGATCCAAATGCTATACCTGACCATTTTTTCGCTTTATCTGATGCCTTGCGTGAACAAGATTTGATTGCTAATGAACAACACGCTAGAACACCTTCAGACACGTTGGAAAATTGTTCAGAGCAACAACATTTGGACGCTGTGGAAGTATCGTTGATAAGTACTTTTGATGACAATGCGCACAATTCTGACACAAATATAGAAGAATCATTAGAACAGCTGTCTCTTTTTGTGACACCGCCAATTCAAGCCACTCCTCAAAAATGTCCTTCCTTACCATCTACTTCCAAAACCCCTGAACAAACACCAACAAAGGTTTTGGCTGAAATCTATCCTGTCCCAAAGTTACCTGCAATGGTTTTAAACAGAAAACAAAGGGCTGTTATTCTGACATCGCcagaaaatatacaaaaacggAAATtgattgaagaaaaaaagaaaccaggaaaaacatgtaaattggctgaaaaaattgataaaaagaAAGTTGTAAAGAATGATATAAAAGGAAAAAAGCCAGCAAAGAAAAAAGCAAAGAATAATAAACCTCTATTTGAATCATCGGACAGCGACATTAATGACGAAGAGAAAGAAAGTTCTGATGAAGAGATATCCGAAGAAGACAACGACAACAGATGTATAGAATGcactgaaaattattataaaacgaCATCAACAGAGGACTGGATTAAGTGCTCCTCTTGCTCTTTTTGGCTGCACGAGTTCTGTACAATGTACAAACCGTTGTGTAATAACTGTGGTAAAAAAGCTAAGAGAGAAGCTATCAGAAAGAAAAAATAG
- Protein Sequence
- MPRNYVRSTLRASWSETDLDEAMKKVRQKEIGVNEAARTYNIPSRTLRRHILAGTLKVGLGRRPVFNQAEEKKLVAHIKQLEKVGFAPDRKDVKEMAYQLAHKLNIKHIFSDTSKRAGDVWFTGFLNRNPELSQRKSEGLSLARAYGVNRADVQDFFNLLAQIYTKNYLSTHPEKIFNMDETGIQVNNKPGKVIATKGSKDVYTLTSSEKGENVTVIACCNAQGNFLPPVLIYKGTYSKPQFSEGLPPGSQVFMNKKSSYINTDLFMKWFEEIFLPAKGPGKALLIMDGHSSHSNNIRLLEVAKDNDVTLLCFPSHTTHAMQPLDRAFFRPFKVYFAQEAKSWMIMNKNKKLTRYDVSKLIGKAWCKAASVSNGVSSLKSCGIYPYDPNAIPDHFFALSDALREQDLIANEQHARTPSDTLENCSEQQHLDAVEVSLISTFDDNAHNSDTNIEESLEQLSLFVTPPIQATPQKCPSLPSTSKTPEQTPTKVLAEIYPVPKLPAMVLNRKQRAVILTSPENIQKRKLIEEKKKPGKTCKLAEKIDKKKVVKNDIKGKKPAKKKAKNNKPLFESSDSDINDEEKESSDEEISEEDNDNRCIECTENYYKTTSTEDWIKCSSCSFWLHEFCTMYKPLCNNCGKKAKREAIRKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091646;
- 90% Identity
- iTF_01091646;
- 80% Identity
- iTF_00032843;