Oqua021454.1
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- lrrfip2
- Assembly
- GCA_949316235.1
- Location
- OX438752.1:3760140-3787313[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-80 6.1e-76 256.5 21.4 1 269 128 388 128 406 0.88 2 2 0.95 3.3e+04 -5.3 12.3 1 38 407 444 407 451 0.88
Sequence Information
- Coding Sequence
- ATGGGCAGGCGGGTAGGGCTGGCGACACCTGACAATAGCGATGAGGAGAGCGGCGATGCGTTCACCGACGGTGACTTCGGAGACACCGACGATGACACCCTCACTGAACGCGTCGATGACCCTAAAAAATCTCCCATTACAGCCACCGAAACTGTTAACATGGATTTGAAGAACGCAGCAACCAACGGCAACTCCAACGATAATAACCACGATGGCCGTGTTAATGGTTCCGATGATCAACTCAAGGTCAACGGACTGAAGAATGGACATTCTAGTAACGTAGATAACCATAGTGGTGACCATGCCACAGACTTTCGTAGAGACTCTCACGGAGAACAAAACCCTTCGATCGTCGGTATTCTCGGTGGCCAGCAGAATCACGCTGAACAGCGGCTAGCGGCGCGACGGGCAGCTCGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTCGAGCGGCAGCAGCGCGAGCAGGAAGACCATGCTGATAAGGCGTACGACATGTACACAGAGACGGTTGGTCGTGGTCCGCGCACCCGACTCGCGGCCCTCAGTCCGGGAGGACTACATTCGCCTAGAAGGAGCTCGGAGGACTCTGCCGATGACGCCTTCAGCATCAAAGACCTTAGGCACGAGCTGAAAGAGGTGGAGGAGAAGTTCCGCAAGGCGATGATCTTAAACGCGCAGCTGGACAATGACAAAGCCGCGCTTGGATATCAGCTGGAACTGCTGAAGGACAGGATAGAGGAGCTGCACGAGGAATATGCTCAGTTGCAGCGGGAGCACAGAGAGAAATGCTCGTCGTACGAGCGTTTAAAACGCGAGCACGCGTCCCTAGAGCGGGAACTGTGCGGCGCGCGGGACGCCGTGCGGGCCCGGGACGCGGCCGCCGCCGACGCGGGCTTCGCCTTCGTGGAGGCGGGCAGCCACGGGGACGCTAAGGGCTTCGGCAACGTGCCGCCTCTCGCGCTAGTCTCCCACCACTCCGAGCAGATGCTCAACGACGCCGGGGAAGGCACGCTAGACGTCCGGTTGCAGAAGCTGGTCTCCACAAAGCAATCTCTGGAGTCCGAAGTCCGCAAGTTGAAGCTGCAGCTGAACGAGGAACGAGCTGCACGGCAGAACGGCGTCGCTAACCACCACGACCAGGAGTACGAGAGTGAAATGGAAACCCTCCGCAAGTCCGTGTCGGAGGCtaaagggcgggcggcgcgggcggaGGCCGAGGCGGCGCTGCAGGCCGCGGCCGTGGCGCGCCTCGAGGCGCAGGTGTCGCGGCTGCGAGCCCGCCAGGACCATCAGGACGAACACGAGGAGCAGCTGAAGCAGGAGCGCCGCCGGCTGCAGAGGGAGGTGGGTACATAG
- Protein Sequence
- MGRRVGLATPDNSDEESGDAFTDGDFGDTDDDTLTERVDDPKKSPITATETVNMDLKNAATNGNSNDNNHDGRVNGSDDQLKVNGLKNGHSSNVDNHSGDHATDFRRDSHGEQNPSIVGILGGQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYTETVGRGPRTRLAALSPGGLHSPRRSSEDSADDAFSIKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELLKDRIEELHEEYAQLQREHREKCSSYERLKREHASLERELCGARDAVRARDAAAADAGFAFVEAGSHGDAKGFGNVPPLALVSHHSEQMLNDAGEGTLDVRLQKLVSTKQSLESEVRKLKLQLNEERAARQNGVANHHDQEYESEMETLRKSVSEAKGRAARAEAEAALQAAAVARLEAQVSRLRARQDHQDEHEEQLKQERRRLQREVGT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01401311;
- 90% Identity
- -
- 80% Identity
- -