Oqua013926.1
Basic Information
- Insect
- Oegoconia quadripuncta
- Gene Symbol
- -
- Assembly
- GCA_949316235.1
- Location
- OX438747.1:26392329-26393786[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-09 1.5e-06 28.7 0.1 2 38 16 52 15 56 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGCACGTACAAACCCAAAACTGATAGAAAAAATATCAATGAAGAAAACATTGAAGACGCAATACGTGAAGTATTGTCAAAGACTTTATCTATACGCAAAGCAGCCGACAAATATAGCATCAAAACTGCGACCCTACAACATCGCATAGAAAAAGCCAGAAAATCATTTGAAGCTACCAGAATATTATCTACAAATGAAGCATCCTCTTCATTACAAGCAGAATCTTCTTTATCACAAGCAGGTCCATCTTCACCACAAATAGCACCATCTATGGAGATGGCACAAATAGCGTCATCTTCAGCACACACTACTACTGCAGCTTTATCATCACACACTGCTACAGCTACTTCATCAAACATCTATGGTTCCAAGTATACCGTTGCACAAGTTTTTTCAATCGAACAAGAAAAGGCATTGACTCAATATTTATTGAATTGCAGTAAAATGCACTACGGCCTTACATTGAGACAGCTTTTGACTTTGGCATACGAGTTCGCAGAATCCTCAGGGTGTAATTATCCAAAAccctggaaaaaaaacaaatgcgCTGGAAAAGATTGGGCAGCTGGCTTCAGGAAGAGAAACCCAGAATTGAGTCTACGAAAACCAGAAAACACAAGCGCAGCAAGAAGCTTTGCTTTTAATAAAGCTGCTGTAGCTCAATTTCATGATAATTACGAACGCATAATGAGACAGTACAATTTTACACCCGATCGAATAATAAACTTAGACGAAACAGGCATAAGCACAGTTCTTTCTACTCCTAAAGTTATTGCTGGAAGAAAACAAAGACAGGTGGGACAAATAGTTTCTGCAGAACGCGGAGAGTTAGTTACTTTCTGTGGTATTATTACTGCTACTGGTTCTTCTCTTCCTCCAGTTTATGTCTTTCCAAGAGTTCACTACAAAGATCACTTCCTAAATGGAGCTCCTGATGGAAGTCTAGGGTTGGCAAACAGAAGCGGCTGGATGACATCAGAATTGTTTATAAGAGTTTTGAAACACATTCAACGTCTTACTTCGAGCAATAAAGATAACCCAATTCTAATCATTTGTGACAACCACGAATCGCACATTTCAATAGAAGCTGTTAACTACTGTCGTGACAACGGTATTGTTTATTTGAGTCTGACCCCACACACGTCACACAAATTGCAACCGCTTGATGTCAGTGTGTTCGGACCCTTCAAAGGCAAATTGAAGATAGCTTTCAACGACTGGCACATTCAAAATGTTGGAAAGACTTTGACCATATACAACATTGCTGAACTGTCAAAATTAGCATATTTGGAATCATTTACACCAAAGAATATCATAGGTGGTTTTTCCAAACCTGGAATTTGGCCAATTAATAAACTGGTATTTGGCGACGACGACTTTGCACCGATAGACATTTTCAGCACAGGTTATCACGATTTGACAGATGAGAACACTCACAAAACACTTTTGTAG
- Protein Sequence
- MVRTYKPKTDRKNINEENIEDAIREVLSKTLSIRKAADKYSIKTATLQHRIEKARKSFEATRILSTNEASSSLQAESSLSQAGPSSPQIAPSMEMAQIASSSAHTTTAALSSHTATATSSNIYGSKYTVAQVFSIEQEKALTQYLLNCSKMHYGLTLRQLLTLAYEFAESSGCNYPKPWKKNKCAGKDWAAGFRKRNPELSLRKPENTSAARSFAFNKAAVAQFHDNYERIMRQYNFTPDRIINLDETGISTVLSTPKVIAGRKQRQVGQIVSAERGELVTFCGIITATGSSLPPVYVFPRVHYKDHFLNGAPDGSLGLANRSGWMTSELFIRVLKHIQRLTSSNKDNPILIICDNHESHISIEAVNYCRDNGIVYLSLTPHTSHKLQPLDVSVFGPFKGKLKIAFNDWHIQNVGKTLTIYNIAELSKLAYLESFTPKNIIGGFSKPGIWPINKLVFGDDDFAPIDIFSTGYHDLTDENTHKTLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01016579; iTF_00744550; iTF_00248880; iTF_00248879; iTF_00007953; iTF_00237425; iTF_00237426; iTF_00736563; iTF_00403701; iTF_00394358; iTF_00394359; iTF_01246776; iTF_00771836; iTF_01078141; iTF_00824671;
- 90% Identity
- iTF_00237426;
- 80% Identity
- -