Gmel022168.1
Basic Information
- Insect
- Galleria mellonella
- Gene Symbol
- -
- Assembly
- GCA_958496185.1
- Location
- OY292311.1:2508208-2509885[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-09 1.4e-06 28.4 0.0 2 38 18 54 17 58 0.94 2 2 2.6 1.7e+03 -0.7 0.0 7 18 366 378 365 379 0.84
Sequence Information
- Coding Sequence
- ATGGTGCAGTTGTACGTGCACAAACCCAAAACtgatagaaaaaatatcaatgaaGAAAACATTGAAGACGCAATACGTGAAGTATTGTCAAAGACTTTATCTATACGCAAAGCAGCCGACAAATATAGCATCAAAACTGAGACCCTACAACATTGCATAGAAAAAGCCAGAAAATCATTTGAAGCTACCAGAATATTATCTACAAATGAAGCATGCTCTTCATTACAAGCAGAATCTTCTTTATCACAAGCAGGTCCATCTTCACCACAAATAGCACCATCTATGGAGATGGCACAAATAGCGTCATCTTCAGCACACACTACTACTGCAGCTTTATCATCGCACACTGCTACAGCTACTTCATCAAACATCTATGGTTCCAAGTATACCGTTGCACAAGTTTTTTCAATCGAACAAGAAAAGGCATTGActcaatatttattgaattgcagTAAAATGCACTACGGCCTTACATTGAGACAGCTTTTGACTTTGGCATACGAGTTCGCAGAATCCTCAGGGTGTAATTATCCAAAACCCtggaaaaaaaacaaatgcgCCGGAAAAGATTGGGCAGCTGGCTTCAGGAAGAGAAACCCAGAATTAAGTCTACGAAAACCAGAAAACACAAGCGCAGCAAGATGCTTTGCTTTTAATAAAGCTGCTGTAGCtcaatttcatgataattacgAACGCATAATGAGACAGTACAATTTTACACCCGATCGAATAATAAACTTAGACGAAACAGGCATAAGCACAGTTCTTTCTACTCCTAAAGTTATTGCTGGGAGAATACAAAGACAGGTGAGACAAATAGTTTCTGCAGAACGCGGAGAGTTAGTTACTTTCTGTGGTATTATTACTGCTACTGGTTCTTCTCTTCCTCCAGTTTATGTCTTTCCAAGAGTTCACTACAAAGATCACTTCCTAAATGGAGCTCCTGATGGATGTCTAGGGTTGGCAAACAGAAGCGGCTGGATGACATCAGAATTGTTTATAAGAGTTTTGAAACACATTCAACGCCTTACTTCGAGCAATAAAGATAACCCAATTCTAATCATTTGTGACAACCACGGATCGCACATTTCAAGAGAAGCTGTTAACTACTGTCGTGACAACGGTGGTTTTTCCAAACCTGGAATTTGGCCAATTAATAAACTGATATTTGGCGACGACGACTTTGCACCGATAGACATTTTCAGCACAGGTTATCACGATTTGACAGATGAGAACACTCACAAAACACAAGATTTACATTTTGTAGACTCGGAAACAAGTCAAAATAATGAAGTTGTTGATAGAGAACAAAATAAAACTCCTACTTTGGATACCGACCCAATTTCAGTGTCTGATGCTGACGATTCTCTACATGTTTCTTCATCACAGGCTATGCTTACTCCTGACGTAGTTAGACCTTATCCAAAAAAGGCGATTACTGACAGTGTCTTAAAAAGAAAAGGAAGAGAAAAGGGACATATCAAGAATATACACTGA
- Protein Sequence
- MVQLYVHKPKTDRKNINEENIEDAIREVLSKTLSIRKAADKYSIKTETLQHCIEKARKSFEATRILSTNEACSSLQAESSLSQAGPSSPQIAPSMEMAQIASSSAHTTTAALSSHTATATSSNIYGSKYTVAQVFSIEQEKALTQYLLNCSKMHYGLTLRQLLTLAYEFAESSGCNYPKPWKKNKCAGKDWAAGFRKRNPELSLRKPENTSAARCFAFNKAAVAQFHDNYERIMRQYNFTPDRIINLDETGISTVLSTPKVIAGRIQRQVRQIVSAERGELVTFCGIITATGSSLPPVYVFPRVHYKDHFLNGAPDGCLGLANRSGWMTSELFIRVLKHIQRLTSSNKDNPILIICDNHGSHISREAVNYCRDNGGFSKPGIWPINKLIFGDDDFAPIDIFSTGYHDLTDENTHKTQDLHFVDSETSQNNEVVDREQNKTPTLDTDPISVSDADDSLHVSSSQAMLTPDVVRPYPKKAITDSVLKRKGREKGHIKNIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01090655;
- 90% Identity
- -
- 80% Identity
- -