Basic Information

Insect: Odynerus spinipes
Gene Symbol: -
Assembly: GCA_032403825.1
Location: JAIFRP010000096.1:1-6231[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.4e-05 0.0022 18.1 1.4 1 23 127 149 127 149 0.96

2 18 1.2e-05 0.00077 19.5 1.9 1 20 155 174 155 177 0.94

3 18 8.5e-06 0.00054 20.0 1.4 1 23 183 205 183 205 0.98

4 18 4.9e-05 0.0031 17.6 4.4 1 21 211 231 211 233 0.95

5 18 6.7e-06 0.00042 20.4 5.6 1 23 239 261 239 261 0.99

6 18 1.5e-05 0.00096 19.2 5.3 1 23 267 289 267 289 0.97

7 18 5.8e-05 0.0036 17.4 6.9 1 23 295 317 295 317 0.96

8 18 5.7e-08 3.6e-06 26.9 2.7 1 23 323 345 323 345 0.98

9 18 4.2e-05 0.0026 17.9 6.7 1 23 351 373 351 373 0.97

10 18 1.3e-05 0.00082 19.5 5.8 1 23 379 401 379 401 0.98

11 18 3.4e-07 2.2e-05 24.4 2.9 1 23 407 429 407 429 0.98

12 18 5.1e-06 0.00032 20.7 7.8 1 23 435 457 435 457 0.98

13 18 1.6e-05 0.001 19.2 9.1 1 23 463 485 463 485 0.98

14 18 2.1e-05 0.0013 18.8 7.5 1 23 491 513 491 513 0.98

15 18 0.001 0.064 13.5 8.8 1 21 519 539 519 541 0.94

16 18 7.8e-06 0.00049 20.2 0.4 1 23 547 569 547 569 0.98

17 18 0.019 1.2 9.5 4.5 1 23 579 601 579 601 0.98

18 18 3e-07 1.9e-05 24.6 1.3 1 23 607 629 607 629 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.4e-05	0.0022	18.1	1.4	1	23	127	149	127	149	0.96
2	18	1.2e-05	0.00077	19.5	1.9	1	20	155	174	155	177	0.94
3	18	8.5e-06	0.00054	20.0	1.4	1	23	183	205	183	205	0.98
4	18	4.9e-05	0.0031	17.6	4.4	1	21	211	231	211	233	0.95
5	18	6.7e-06	0.00042	20.4	5.6	1	23	239	261	239	261	0.99
6	18	1.5e-05	0.00096	19.2	5.3	1	23	267	289	267	289	0.97
7	18	5.8e-05	0.0036	17.4	6.9	1	23	295	317	295	317	0.96
8	18	5.7e-08	3.6e-06	26.9	2.7	1	23	323	345	323	345	0.98
9	18	4.2e-05	0.0026	17.9	6.7	1	23	351	373	351	373	0.97
10	18	1.3e-05	0.00082	19.5	5.8	1	23	379	401	379	401	0.98
11	18	3.4e-07	2.2e-05	24.4	2.9	1	23	407	429	407	429	0.98
12	18	5.1e-06	0.00032	20.7	7.8	1	23	435	457	435	457	0.98
13	18	1.6e-05	0.001	19.2	9.1	1	23	463	485	463	485	0.98
14	18	2.1e-05	0.0013	18.8	7.5	1	23	491	513	491	513	0.98
15	18	0.001	0.064	13.5	8.8	1	21	519	539	519	541	0.94
16	18	7.8e-06	0.00049	20.2	0.4	1	23	547	569	547	569	0.98
17	18	0.019	1.2	9.5	4.5	1	23	579	601	579	601	0.98
18	18	3e-07	1.9e-05	24.6	1.3	1	23	607	629	607	629	0.97

Sequence Information

Coding Sequence: TTTCAAGTTCCAGACTTGAAGCCAGGTGGTCATATGATGGACGTAAGAACAGCCGATGGTTCGGTAGTCAAAATTAGTGCGGGAAACGAACAAGACTTAGCTAAAACACTTGGTGTCGAAATGGTACAAAACATGTACAAGGTCAATGTCGAAGATATTAACCAGCTTTTAGCGTATCACGAAGTTTTCGGAAAACTGCAAAGTGAAATTGCAGCCGGTACTACCTTGGTGGGAAGTACAGTTCCTACGCAAACAGTTACCACGATTCAGAATGGTACACCGATAGTGCAGCAAGTTCAGTTGAATAAGTTTGACATAAAAACCAGCGATGGGGAAGCAACACCAGGGCCAAGCGCATCACCGGTATCGGTCGGCAGTCATGCCTGCGAAATATGCGGAAAGATCTTCCAGTTTCGTTACCAACTCATAGTACATCGTAGATATCACACAGAGAGAAAACCATTCACATGTCAGGTTTGCGGGAAGGCATTTTCAAACGCGAACGACCTGACGCGTCACGGCAAGTGTCACTTGGGTGGATCCATGTTTACGTGCACTGTATGTTTTCACGTCTTCGCGAATGCACCTTCGTTGGAACGGCACATGAAAAGACACGCTACCGACAAGCCTTATAATTGTACGGTGTGTGGCAAGAGTTTCGCAAGGAAGGAGCATTTAGACAACCACACCCGATGCCATACAGGCGAAACACCATACAGGTGCCAATATTGCTCGAAGACATTTACCCGAAAAGAACACATGGTAAATCACGTGCGCAAACACACTGGTGAGACTCCACATCGATGTGATATTTGCAAGAAGAGCTTTACTCGCAAAGAACACTTTATGAACCATGTTATGTGGCATACAGGAGAAACCCCTCATCATTGTCAAGCCTGTGGCAAGAAGTATACGCGCAAAGAGCACCTCGCTAACCACATGCGTTCGCACACCAACGACACCCCGTTCCGCTGTGAGATATGCGGTAAGTCGTTTACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCATACGGGTGAGACGCCGCACCGCTGCGACTTCTGCTCGAAGACGTTCACGCGAAAGGAGCATCTCCTCAACCACGTTCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTAGTTAACCACATCCGCCAACACACAGGGGAGACGCCCTTCCGCTGTCAGTACTGTCCAAAAGCATTTACGCGGAAGGATCATCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGAGGAAGGAACATTTGACCAATCACGTGCGTCAACATACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTTACTCGTAAGGAGCACTTGACGAATCATGTACGAATCCACACTGGCGAATCTCCGCACAGATGTGAATTTTGTCAGAGGACGTTCACTAGGAAAGAACACCTCAATAATCATCTCCGTCAACATACCGGAGATTCCTCGCACTGTTGTAACGTGTGCTCGAAACCATTTACGAGGAAGGAGCACCTCGTAAATCACATGCGCTGTCATACCGGTGAACGTCCATTCGTGTGCACGGAGTGCGGCAAGAGCTTCCCGTTGAAGGGTAACTTGCTCTTCCACATGCGATCGCATAACAAAGGAAGCAACGCCGAGAGACCGTTCCGTTGCGATCTCTGTCCCAAAGACTTCATGTGCAAAGGGCACTTGGTCTCTCACAGACGATCGCATTCCGACGAACGCCCGCACAGTTGTCCCGATTGCGGCAAGACCTTCGTCGAGAAAGGAAACATGTTGAGACACTTGCGAAAGCACGCGGCTGAAGGCCCACCGACGCAAGTCAGCACGCCTTCGGCTATTCCACAATCTGGAGTTTTACCAATACCAACCGCCGCTGTCTTGGTTGGACATCCGTTggcaccaccagcaccaccggTGGTCCCACAACATACCGTGGTCGTCCCGACACCACCAGGAGTTTTAACATCCTActaa
Protein Sequence: FQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQSGVLPIPTAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00873924; iTF_00263691; iTF_01514294; iTF_01514951;
90% Identity: iTF_00873924; iTF_01514294; iTF_01514951;
80% Identity: -