Ospi002437.1
Basic Information
- Insect
- Odynerus spinipes
- Gene Symbol
- -
- Assembly
- GCA_032403825.1
- Location
- JAIFRP010000013.1:2050416-2052999[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-12 7.4e-09 34.9 0.0 2 35 66 100 65 106 0.91
Sequence Information
- Coding Sequence
- ATGGAAAAGCCCAGAAAGCCTCACATATTAGCAAAGTTGTCGGCGGAGGCGCACGGACCACCTCCTCCGACCCCCTACCCCTTTTCTCTAgaggCCAAGTTGTTGGAATCATCCCACGCTTGGCTCGGCGCCTCCACCTCCAGTATAGCAGCTGACTATACCAGCCTGCTGAAGCTGAAGGCGCCGACGTGGACGCGGCACGATCTCCAGGAGGCGATCGAGGCCGTGGTAACGCAGAAGATGAGGTTCACCCAGGCGTCGACGAAGTACGGTATACCGAAGGGCACCCTCTACGACAACATCCTCGGCAAATCGAAGAGGATGATGGTCCTCGAGGAGGCTGGCCTGAATTCGACCGAGGAAACGGCCGTCCTCGAGTTCTGCTGCGACATCAGCGTCAGCCCGTACAATCGACGTACGAAGAAATCGTTGAACGCGATCTTGAACTTCGTCGAGAAGCTCAGAAGGAAACGCGATCCTGGCTTCGTTTTTACCGGACTCTCGGGTTTTCGTTGGTGGTGGGCCTTTTGTAAGAAGCACTCGATAGTCTCGTTGTACttcaacgacgagaacgagaatgaATGA
- Protein Sequence
- MEKPRKPHILAKLSAEAHGPPPPTPYPFSLEAKLLESSHAWLGASTSSIAADYTSLLKLKAPTWTRHDLQEAIEAVVTQKMRFTQASTKYGIPKGTLYDNILGKSKRMMVLEEAGLNSTEETAVLEFCCDISVSPYNRRTKKSLNAILNFVEKLRRKRDPGFVFTGLSGFRWWWAFCKKHSIVSLYFNDENENE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219718;
- 90% Identity
- iTF_01453998;
- 80% Identity
- -