Obru005152.1
Basic Information
- Insect
- Odontomachus brunneus
- Gene Symbol
- -
- Assembly
- GCA_010583005.1
- Location
- NW:254769-271267[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 1.5e-05 0.00098 18.8 0.9 1 23 229 251 229 251 0.98 2 32 0.0075 0.48 10.4 3.6 1 23 274 297 274 297 0.96 3 32 0.0015 0.097 12.6 0.6 2 23 304 326 303 326 0.96 4 32 0.0003 0.019 14.8 0.2 1 20 346 365 346 367 0.94 5 32 0.037 2.4 8.2 0.1 2 23 464 485 463 485 0.95 6 32 0.0084 0.54 10.2 0.2 1 23 491 514 491 514 0.93 7 32 0.00011 0.007 16.1 0.1 1 23 586 609 586 609 0.96 8 32 0.013 0.82 9.6 0.6 1 23 615 638 615 638 0.93 9 32 0.11 7.1 6.7 2.3 1 23 651 673 651 674 0.95 10 32 6.5e-06 0.00042 20.0 1.0 3 23 718 739 717 739 0.96 11 32 2.7 1.7e+02 2.3 0.4 1 23 771 794 771 794 0.92 12 32 0.033 2.1 8.3 1.2 2 23 801 824 800 824 0.94 13 32 1.3 83 3.3 0.0 2 23 833 855 833 855 0.91 14 32 0.016 1 9.3 0.1 2 23 862 884 862 884 0.94 15 32 8.3e-05 0.0053 16.5 3.2 1 23 892 914 892 914 0.97 16 32 0.085 5.4 7.1 0.3 2 23 947 970 946 970 0.93 17 32 0.00019 0.012 15.4 3.3 1 23 973 996 973 996 0.97 18 32 0.0019 0.12 12.3 0.3 2 23 1003 1025 1002 1025 0.95 19 32 0.00085 0.054 13.4 3.9 1 21 1052 1072 1052 1073 0.95 20 32 0.0025 0.16 11.9 1.8 2 23 1087 1108 1086 1109 0.93 21 32 0.33 21 5.2 1.1 1 23 1112 1135 1112 1135 0.94 22 32 0.0097 0.62 10.0 0.9 2 23 1142 1165 1141 1165 0.90 23 32 2.8 1.8e+02 2.3 0.2 2 23 1173 1195 1173 1195 0.94 24 32 3 1.9e+02 2.2 0.0 2 23 1202 1224 1201 1224 0.88 25 32 0.21 13 5.8 2.7 2 23 1233 1255 1233 1255 0.96 26 32 0.62 40 4.3 0.5 2 23 1261 1283 1260 1283 0.91 27 32 0.015 0.99 9.4 0.3 1 23 1344 1367 1344 1367 0.95 28 32 0.00022 0.014 15.2 1.0 1 21 1393 1413 1393 1414 0.95 29 32 0.3 19 5.3 1.9 2 23 1515 1537 1514 1537 0.94 30 32 0.57 36 4.5 0.4 2 23 1544 1566 1543 1566 0.94 31 32 0.64 41 4.3 2.5 1 23 1577 1599 1577 1599 0.97 32 32 0.05 3.2 7.8 0.1 1 19 1606 1624 1606 1627 0.95
Sequence Information
- Coding Sequence
- atgacgacgatggaGTCGAAAGTGAGTTACGACGAGCTCTGTCGTCTGTGCGCGTCCTACAATGCCGTTAAAGTCGACATATTCGGTCCGGACGGCAAAGATCGACAGCTCGCCGACAAGATCCAGGCGTGCCTACAGTTCAAGATATCGGAAGACGATGGTTTGCCGAAATCTTTGTGTCATAGATGCGTTTTTAATTTGGAGAATTTTTACGATTTTAGAACTGCGTGTGTTAATGCAGTTGATTTATTAAGGAGATGTCAACCAAGAGAAGCGGCGAATGATGACGGTGCAAATAATACCGCGCAGTGCGACGAGATGCACGCGGAGTTTCTCAAGGAGAAGAAAAACACACCAGTCCTTATTCCGGAGGCACCTGTAGTCAATCCTAATGCAGCGTTAGGCACACCACCGAGACTAAATTCCGATGGTGAAGCGGATCCCGAGGTCGAAGAGATCCTCGACACAAGTGAAGGTACAGATGAAGCGACAGTGGTCGATGACTCGGAGGACCGAAGGTCAGAATACGAATATGAGATGGACATGGAGACGAATCCTAGCGACTTCTTGGAGATGACACCGATGGTGACCGAGGATAATGAGGAATGCGAGACGAAAAATGTCACCGCGACTCCTCAAGATACCACCGCAGTCTTTCAACATACGTCTCAACAGCACGAGGTCTACGTCTGTTCTCTATGCAGCAAAGCGTTCAGCTCCAAAGGTCATTTATCTCTGCATGCGAGGATTCACGTGGGCGAGGGCGACGTGATCGGTGAAAAAGTTATCACTGACGATCATACGTCGTTTAAGCGACCGTACCAATGTGATCTTTGTCACAAATCATATTCAACCGCGAAGCATCGATGGGGACACGTTTCTACGTCACATAGAGGACATCCTGCTGTAACATGTAGATATTGTTCGCGAATATACTCGACGCGGATAAATCTCGAAGAGCATGTGAAGTCACGGCACGCTGGTCTATCAGCACCTCCGAACATGGCGGTTTCGTTCTTTCGCTCGGAAACACGTTATCAATGCAAAACGTGTGCAAAAGTATTTTCGGATCAAGCAGATTTCAACGCGCATAGCCAGATCTGCACAGAAGAGCAGCGTATTGCTTTACTCGAGAAAACCGAGCCGCAAAACAATAAGAGCTTGGTCAATACGTCCGATATCTCTAGCATAGACACGGATGATGAGAACAAAGACTACAGGAACGCTGAGGCTAAACTGGCCAAAAATCCTCAATTGACTATATTGAAACAAGCGTTGACTAAAGGAGAGAGTCTAAAGCGGGATTACGACGATAGCTCAACGCCCGATTGCAAGCCAAGAAAACTAGCTAAGACAGATAATTGCGAAGCGAATTCTCAGAAGAGATGGTATTGCGAAGCGTGTCCGCAAAGTTTCATGTCCGTGGATAGTTTAAAGGAGCACGAGATCACGCATGAAGCGGAGAAACCTTACGTTTGTATACTGTGCCAGAAGGATTTTGTTCTGAAGTCTTCATTAAGCAGACATATCGTGACGATACACGGTGTCGATCCCACGCCTATCGTTGACAGTGATAAATGTTTGAAAAAGACCGTAATGCCTCAGAGTTGGAATGATCAAATGGACGTCGGCGTTTATGACCAAGACGAGATAAAGGAGTCGCGAGAGTTCTCGTCGTCACCTGAGGAAAACTTGGAGAACGATGAGAAAGATTCCAAGAACAATCACGAGAATATGATAGAAATAGAAACAGTATTTGTATGCGAAATTTGTACGAGAGATTTTAATGATCGCGCATCGTTGTGGCTACATATACGAGCGACACATAAAGAATTCGCCGCATTTGCTTGTGGAGTATGTTTGAAAATTTGTTCCGACAATACGCAGCTTCAGAATCACGTTGTTATGTATCATGGAGGATCCAAACTTTTAATATCGGAACAAAGAAGGTACAGCTGCACAATATGTGGTAGACAGCATGACTCGAGGAAAAAATTGATTGCTCATGTCTCTATACACCATGTCGATCCTTCGTATGATCCTGCACATTTTGTACAGTTAAATAGTAATTATTACAACGAGAACTTAAATGTTAACGAAGGAAATGAGCAAGTATTGGATTTCGACGGTGAAGATGGTGAGAAGGTCGACTGTTATATTTGTAACAAATCATTTCCCAACGAGGATCATCTTATACGACATCAGAGAAATGCTCATAAGTCTGAACAGGTACTTCCAGTAGATGTTACGGGAAGTGGAAATGTACTCAACGTCAACGGTAATGGCAATAAAGCGCAGtatcatttattttttgtatgcGAAGTTTGCGGCAGTTCCCATTCCAGTAAGTGGGAACGTTGGTTGCACATCAACAACACGCATAACGACGTATCTGCCATTAAGTGTGAATTCAAGGACTGTGGGAAGATATTCGCGACGAAATTGTTGCGCAACGAGCATATCCAACATCATATGCTTCAAGGCGCCTCGCCCAACACCTGCGAGGTTTGCGGAAAACTGTGGGCCACTCGCGTCGATTATTGGAAACATGTAATGGGAGTACATTCGGACACAGTGCCTAGGGTTTGTGGTGTTTGTCTAAAGATATTTTCCGACGTGGTACAGTTAAGCAGACACGTAAAGGAGAAACACTGGCCGCTGACCGGTGGTGATTTTTGCTGTGATATTTGCGGTAGGCCCTATTCCAATAAATCAAAGATGTCCCGACATAGGAAGATACACGGCTTGGAAATGGACGCGTGTGATAATAGCAGCATTAATGAAACGACCAACGAATCGTCCAAGCTCGATCATAACGGTGCTGTAGAAGTCGAATTGAGTTGCGATCAGTGTCCGGACCTCAAGTTCTCAACGCTAGACAGTTTGTCTAATCACAGACGTCTAGTGCACAGTCTGTTTCCGTGCGACTTGTGTAACAAGTGCTACGGCAGAACGTCGCACTTGTGGAAACACGTAAACAGAGTGCACAAAGGTCACCCGGATGTTACTTGTCCATATTGTCTGAAAACCAGCGCTTCGAGGGATCACTTGATAGCGCATGTCGCAAAGAATCACAGGTACGAGCCCAACGTGGGGAAGGACAGTATGAATTGCATCACCCCGAAATCGTCTAGCATTGAGGACGGCGTCCTACATTATTGCGAAAAATGTAACAAAGGATTCCACAAACGCTATCTGCTCAGGCGTCACATGAAAGGCTGCCAGAACTATCGCAAGGATCCCGGCGCTTTGTTGACTCGTTGCCGGGCCTGCGAGAGAATATTCAAGGACCGTGCGAGCCTGCAGAAGCACATCGAGAATCATCACACTACATATACCTGCCATTTGTGTAACGAGACGATCACGTCCAAATTAGGTATCATGACACATAATCGCGTTAATCACATGGACCATCCGGATCTGACCTGCGACTATCCGAGCTGCAAGAAGCTGTTCCGCACCAAGGAGGACTTGGAGTCGCATCGGAAGGACCATAAGCACCACACTAACTTGAACGTTTGCGACTTTTGCGGTGATACCGTAGAGAACAAGCTGAAGCTGAAGATGCACGTGTTGTCGTTACATCGAAATGAGATCGGAGTATCATGCGGCGTCTGTTTGATACCCATGAAGGATCCCAAAGATCTGAAGAAACATGTTGAAGCAGAGCACAGTGGTGTTCTCTCCAAGCCGAACACGTGTCAGGTGTGTGGCAAGCAGTATGCCTCCAAGTGGAAAGCTTTTGACCACACGAAGAAGTGTCATGGCAAGGTCTTTCTTACGTGCAAACAGTGTCTGGCGGTCTTCACGGATGAGAACGACATTCGCGAGCACTACGAGCATGTGCACAACGTTCCCAAAGACCAGTTAGCCGCCTTCGAGTACAGAATGGATCTCGGCGCAAAAAGAGAAGGCTACGAGACTCCCGATATCATTGTGAAGGAGGAACCGGATGATCTTGAGTTCGACGAGGAGTTGTGTGACGAGGACTCAAACGATTCTAAACGTAAACGATTGGTGAGTGACACATACGACTGCGAGATGTGTCCCGAAATGTTCCTCAATTCTGAGACCCTTTCCAAGCATTATCAGAACGTCCACAACACCGATCCGGTgcgtatgtttaaaaaattcaagaaggATAACGGTAAGCGCAAAATGAGGAACAGAAACAATTTCGAATGTAAGAATTGCAAGAAGCAATTCTCCACTAAGACCTTATATTGGAATCACATTAATGTGTGTACAAGACGTAGCGTTTTAGGTAGATTAGACGTGCCGAATATTCCGAACTCGATCTTGGAGTCGCATTTGAAGAACAACAATCAGATCAAGCGGGAGGAGCCGATGGTGATGACGAACGAGTCCAACCTGAACATTCCCGACTTCAACTTATTCGAGGACATTAATATGCAACTGTCGGCGCAGAAGCCGGTGCCGAATCTCATGCCGTTGTCGCACGTTAAGCCGACAGGTAATACGGGCAAGTGCTCGAGAAAGGACTCACGCAAAGTGTACGATGAATCGACTAATACAGAGTGCACATGCGAGGTCTGTGGTAAACAGTGGCCTGCAAAGAAGCACTTATGGCAACACCTAATTCGCTTCCATCGCGCTGAGGCTGCTGTCACGTGCGGTGTGTGCTTAAAGCTCTGTAAAACTTATCAAGATCTGGCCGACCACTTGAAAGCCGCTCACGCTGCCATTCTGTCGTGCGAAGGTAATAATTTCACATGCAAGACCTGCGGTAGATATCACAACGCGAGAAGTAAGTTATTATTGCACATGAGTATTCATATCGGTATTACTGGAAATTACCGGTGTCAGAAATGCCAGCAAGGTTTCATGAGCGAGGAGAAGCTCACTGAGCACGCGGCGAACTGTAATGGTAAGTCGGAATTTGGAGATCACGCGGAGGACGATAACACCGAGAAGAATGACGATAATGACGAGAAGGGTAGTTTAATCGCAGATGAGACGTCGGTGATCGGTGATGGGGACGAAGGAGATTTTGAGTCGGAAGTTGAAGGCAATGAAGACATCCATGAAGAGGACAGTAACAGCGATGATGATTCGGAAGACAGCGATGACTCGGATAGCAGTAATAGTAGCTCCAGTGACGAAGAGGGAGAGGGCGAAGAAGACGAAGAGAACGAGTCCGAGTCCGACACGAGATCCAACAGTAGAGCGACTGGGGACATGTCGTGTAATTCGGAGAGTGTCGATTCCGACTCGGACGTGGAGATAAACCCGATGGAGAACAAAACTGTAAGTGACATTAATAGTTTCAGGATATGCGACGATAATATGCAGAAGCAATCCATGGGAAGGAACGCTGACAATGTGAGAGCCCCGACGGTCGCGGGGCAAGCTCAGCAGAATAATATGAATAAGCTGTTGGGTTCTCACGCGTCTGCAGATACGGACAATTATAATGCATTATATCTCGAGAAATCCGCTGAAATCACTGTGCACGATGTGAATTTATCCGAGGATGATGATGAAGATGACGATGATGAGGAACATGAAAATAATGGTAATGACGAGGGAGAGacaaaagaagaggaagaagaggaagatgatgatgataacgatgatgatgatgatcaggatgaggaggaggaggaagaggaggagcaggtggaggagaaggagaaggaaaaggaggaggaagaagaagaggaggaggaggaagaggaggaggaggaagaggaggaagaggaggaggaggaggaagaggaagaggaagaggaggaggaggaagagagagaagaagaagaagaaacaggtGAAGGTAATattgataatgatgatgagaatgagaatgataatgataatgttaATAATGATGCTGATGATGACAAAAATGAGagcgatgacgatgatgacgatgacgatgacgacgacgatgatgataatGAGAACAACGATGACGAAGACAACGATGATGATGGTGAAGACGGTGGTGGCGATGGTAATAATCAtggtgatgataatgatgaagaagaggagaaggaggaacaaGAACATGAAGATGATGATTATGGTGGTCCGCCCATATTAAGCCCAGTAATACCGCAAGATAACGGGTCAGAGGAAGAGAGTGATATGATGGGCCACACGAGGCACAAGCTTAGTCCTATGGTACCACTGAGTATGCATGTAGATCACAAAGATCTAAACGAGTGTGAGATAACGGAAATACAGAATGTAGACGCGGAGAACGTAGACGCTTCCTCTATTTCGAACGCGCCAAATTTTTTCGCAGCCAATAATAATATCCTACGTGTGATCTGGGGCGAGGACGCGGTCAACGCGGTGGCCGAtgacgatcgcgatcgcgattgcGATTCGGACATTGGCGGTATAGAGGTATTGGGTGGAAACGGGCAGTTCTGTAAGATGGAGACGAACGCGGAGAGCGACGAATTTGAAGAAGATTCTATGAACGAGCATGAAGAGAACGTGGCGGAGGACAGTGGTAGGGACGGAAGCGATCAGATGCATTGCAATCTGGATGGGACTGTGTTAATGGTGGCTAATGATTCGGAAGGTAATCAGATTTTGATCGAACAAAACGTGTTGACCATAGATAACGAAGACTCTAACGCCGAAGCGGCGCAATATATTTATCCAGAAAGTGCATATGAGATCGCAGATTATGCGAACGCACGAAACGAAAATGACGGCATGCAAACGGATGAGATGCAGGGTATATCGTACATTCAGGACTCGTCGGAGAATGAGGAGGACAGCGTGGAAGATGATACCGAGGAGAATGGTGATAACACGCGAAAGTAG
- Protein Sequence
- MTTMESKVSYDELCRLCASYNAVKVDIFGPDGKDRQLADKIQACLQFKISEDDGLPKSLCHRCVFNLENFYDFRTACVNAVDLLRRCQPREAANDDGANNTAQCDEMHAEFLKEKKNTPVLIPEAPVVNPNAALGTPPRLNSDGEADPEVEEILDTSEGTDEATVVDDSEDRRSEYEYEMDMETNPSDFLEMTPMVTEDNEECETKNVTATPQDTTAVFQHTSQQHEVYVCSLCSKAFSSKGHLSLHARIHVGEGDVIGEKVITDDHTSFKRPYQCDLCHKSYSTAKHRWGHVSTSHRGHPAVTCRYCSRIYSTRINLEEHVKSRHAGLSAPPNMAVSFFRSETRYQCKTCAKVFSDQADFNAHSQICTEEQRIALLEKTEPQNNKSLVNTSDISSIDTDDENKDYRNAEAKLAKNPQLTILKQALTKGESLKRDYDDSSTPDCKPRKLAKTDNCEANSQKRWYCEACPQSFMSVDSLKEHEITHEAEKPYVCILCQKDFVLKSSLSRHIVTIHGVDPTPIVDSDKCLKKTVMPQSWNDQMDVGVYDQDEIKESREFSSSPEENLENDEKDSKNNHENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNTQLQNHVVMYHGGSKLLISEQRRYSCTICGRQHDSRKKLIAHVSIHHVDPSYDPAHFVQLNSNYYNENLNVNEGNEQVLDFDGEDGEKVDCYICNKSFPNEDHLIRHQRNAHKSEQVLPVDVTGSGNVLNVNGNGNKAQYHLFFVCEVCGSSHSSKWERWLHINNTHNDVSAIKCEFKDCGKIFATKLLRNEHIQHHMLQGASPNTCEVCGKLWATRVDYWKHVMGVHSDTVPRVCGVCLKIFSDVVQLSRHVKEKHWPLTGGDFCCDICGRPYSNKSKMSRHRKIHGLEMDACDNSSINETTNESSKLDHNGAVEVELSCDQCPDLKFSTLDSLSNHRRLVHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHPDVTCPYCLKTSASRDHLIAHVAKNHRYEPNVGKDSMNCITPKSSSIEDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHTTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCDYPSCKKLFRTKEDLESHRKDHKHHTNLNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVEAEHSGVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIREHYEHVHNVPKDQLAAFEYRMDLGAKREGYETPDIIVKEEPDDLEFDEELCDEDSNDSKRKRLVSDTYDCEMCPEMFLNSETLSKHYQNVHNTDPVRMFKKFKKDNGKRKMRNRNNFECKNCKKQFSTKTLYWNHINVCTRRSVLGRLDVPNIPNSILESHLKNNNQIKREEPMVMTNESNLNIPDFNLFEDINMQLSAQKPVPNLMPLSHVKPTGNTGKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKTYQDLADHLKAAHAAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHIGITGNYRCQKCQQGFMSEEKLTEHAANCNGKSEFGDHAEDDNTEKNDDNDEKGSLIADETSVIGDGDEGDFESEVEGNEDIHEEDSNSDDDSEDSDDSDSSNSSSSDEEGEGEEDEENESESDTRSNSRATGDMSCNSESVDSDSDVEINPMENKTVSDINSFRICDDNMQKQSMGRNADNVRAPTVAGQAQQNNMNKLLGSHASADTDNYNALYLEKSAEITVHDVNLSEDDDEDDDDEEHENNGNDEGETKEEEEEEDDDDNDDDDDQDEEEEEEEEQVEEKEKEKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEREEEEETGEGNIDNDDENENDNDNVNNDADDDKNESDDDDDDDDDDDDDDNENNDDEDNDDDGEDGGGDGNNHGDDNDEEEEKEEQEHEDDDYGGPPILSPVIPQDNGSEEESDMMGHTRHKLSPMVPLSMHVDHKDLNECEITEIQNVDAENVDASSISNAPNFFAANNNILRVIWGEDAVNAVADDDRDRDCDSDIGGIEVLGGNGQFCKMETNAESDEFEEDSMNEHEENVAEDSGRDGSDQMHCNLDGTVLMVANDSEGNQILIEQNVLTIDNEDSNAEAAQYIYPESAYEIADYANARNENDGMQTDEMQGISYIQDSSENEEDSVEDDTEENGDNTRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00452717; iTF_00769839;
- 90% Identity
- -
- 80% Identity
- -