Dqua005564.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dinoponera quadriceps
Gene Symbol
-
Assembly
GCA_001313825.1
Location
NW:119476-137088[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 5.9e-06 0.00035 20.1 1.0 1 23 232 254 232 254 0.98
2 32 0.0076 0.45 10.3 3.6 1 23 277 300 277 300 0.96
3 32 0.0015 0.09 12.5 0.6 2 23 307 329 306 329 0.96
4 32 0.00022 0.013 15.2 0.2 1 20 350 369 350 371 0.93
5 32 0.0039 0.23 11.2 0.1 2 23 470 491 469 491 0.95
6 32 0.016 0.97 9.3 0.2 2 23 498 520 497 520 0.90
7 32 0.00011 0.0066 16.1 0.1 1 23 592 615 592 615 0.96
8 32 0.0033 0.19 11.5 0.9 1 23 621 644 621 644 0.96
9 32 0.058 3.4 7.5 0.8 1 23 657 679 657 679 0.97
10 32 6.6e-06 0.00039 20.0 1.0 3 23 724 745 723 745 0.96
11 32 0.015 0.86 9.4 0.1 1 23 777 800 777 800 0.96
12 32 0.0022 0.13 12.0 1.4 2 23 807 830 806 830 0.94
13 32 1.3 78 3.3 0.0 2 23 839 861 839 861 0.91
14 32 0.075 4.4 7.2 0.1 2 23 868 890 868 890 0.94
15 32 8.4e-05 0.005 16.5 3.2 1 23 898 920 898 920 0.97
16 32 0.044 2.6 7.9 1.0 2 23 954 977 953 977 0.93
17 32 0.0002 0.012 15.3 3.3 1 23 980 1003 980 1003 0.97
18 32 0.00056 0.033 13.9 0.2 2 23 1010 1032 1009 1032 0.96
19 32 0.00086 0.051 13.3 3.9 1 21 1059 1079 1059 1080 0.95
20 32 0.0025 0.15 11.8 1.8 2 23 1094 1115 1093 1116 0.93
21 32 0.34 20 5.1 1.1 1 23 1119 1142 1119 1142 0.94
22 32 0.0082 0.49 10.2 2.2 2 23 1149 1172 1148 1172 0.92
23 32 2.9 1.7e+02 2.2 0.2 2 23 1180 1202 1180 1202 0.94
24 32 0.6 36 4.3 0.0 2 23 1209 1231 1208 1231 0.93
25 32 0.21 13 5.8 2.7 2 23 1240 1262 1240 1262 0.96
26 32 0.63 37 4.3 0.5 2 23 1268 1290 1267 1290 0.91
27 32 0.016 0.92 9.3 0.3 1 23 1351 1374 1351 1374 0.95
28 32 0.00032 0.019 14.7 1.1 1 20 1400 1419 1400 1421 0.94
29 32 0.3 18 5.3 1.9 2 23 1523 1545 1522 1545 0.94
30 32 0.72 43 4.1 0.7 2 23 1552 1574 1551 1574 0.94
31 32 4.5 2.6e+02 1.6 2.6 1 23 1585 1607 1585 1607 0.92
32 32 0.45 27 4.7 0.7 1 19 1614 1632 1614 1634 0.93

Sequence Information

Coding Sequence
atgacgacgatagAGTCGAAAGTGAGGTACGACGAGCTTTGTCGCCTGTGCGCGTCCTACAATGCCGTCAAGGTGGACATATTCGGCCCGGATGGCAAGGACCGACAACTCGTCGACAAGATTTTGGTCTGCCTCCAGTTCAAGATATCGGAAGACGATGGTTTGCCGAAATCTCTATGCACTAGATGCGTGTATAATTTGGagaatttttacgattttagAACTGCATGCATCAATGCAGTTGCTTTGTTAGAGAGATGCCAGCCATCGAGAGATGCGGCGAACAATGACGGTGCAGATAATGCCGCGCAATGCGACgaagtgcatgcggagtttctcaaggagaagaaaaacacACCGGTGCTTATCCCGGAGGCGCCTATAGTCAATCCTAATGCGGCGTTAGGCACACCACCGAGATTGAATTCCGACGGCGAAGCGGATCCGGAGGTCGAAGAGATCCTCGACACGAGCGAGGGCACCGATGAAGCGACAGTGGTCGATGACTCGGAGGATCGAAGATCGGAATACGAATATGAGATGGACATGGAGACGAATCCCAGCGACTTCTTGGAGATGACACCGATGGTAACCGAGGATAACGAGGAGTGCGACGCGAAAAACATCGTCGCGACGACTCCCCAGGACAACAATGCCGCGGTTTTTCAGCACACGTCGCAGCAGCACGAGGTGTATGTTTGTTCTTTATGCAACAAAGCGTTCAGTTCCAAAGGTCACTTGTCTCTTCACGCGAGGATTCACGTGGGTGAGGGCGATGTGATCGGGGAGAAAGTTATCACCGACGATCACACGTCGTTCAAGCGGCCGTACCAATGTGATCTCTGCCATAAATCGTATTCCACCGCGAAGCACCGATGGGGACACGTTTCTACGTCGCACAGAGGACATCCTGCCGTGACGTGCAGATACTGTTCGAGGATATATTCGACGCGAATAAATCTCGAGGAGCATGTGAAGTCGCGGCACGCTGGTCTACCGGCACCGCCCCCGAACCTGCCGGTTTCGTTCTTCCGCTCGGATGCGCGCCATCAGTGCAAAACATGTCCAAAGGTGTTCGTCGACCAAGCGGACTTCAACGCGCACAGCCAGATCTGCACGGAGGAGCAGCAGCGTATGGCTTTGCTGGAGAAGATCGAGCCATTACAGAGCAACAAGAGCCTGGCCGACACGTCCGACATCTCCAGCATAGACACGGACGACGAGAACAAAGACTACAGGAACGCCGAGGCTAAGTTGGCGAAGAATCCGCAGCTGACTATACTGAAGCAAGCGTTGACCAAAGGAGAGAGCCTGAAACGGGACTACGACGACAGCTCGACGCCCGATTGCAAGCCGAGAAAAATCGCTAAGATAGACAACTGCGAGGCGAATCCTCCGAAGAGATGGTACTGCGAAGCGTGTCCGCAGAGTTTCACGTCGGTGGACAGCTTAAAGGAGCATGAGATCACGCACGAGGCCGAGAAACCGTTTATTTGCATACTGTGTCAGAAGGATTTCGTGCTGAAGTCCTCATTGAGCAGGCATATCGTGACGATACACGGTGTCGATCCCACGCCTATCGTTGATAGTGATAAATGCCTGAAGAGGGCCGTGATGCCTCCGAGTTGGAACGATCAAATGGACGTCAGTGTTTACGAGCAAGACGAGATGAAGGAATCGCGAGAGTTCTCGTCGTCACCGGAGGAAAATCTGGAGAACGACGAGAAGGATTCCAAGAACAATCACGAGAACATGATAGAAATAGAAACGGTGTTTGTATGCGAAATTTGCACGAGAGATTTcaacgatcgcgcgtcgttgTGGCTGCACATACGGGCGACGCACAAGGAATTCGCCGCGTTCGCCTGCGGAGTGTGCCTGAAAATCTGTTCGGACAACACGCAGCTTCAGAATCACGTCAACATGTACCACGGGGGATCCAAACTTTTGATATCGGAACAAAGGAGGTACAGCTGCACGATATGCGGCAGGCAACATGACTCGAGGAAAAAGCTGATTGCTCACGTCTCGATACACAACGTCGATCCTGCCTACGACCCAGCGCATTTTGTACAGTTAAATAGTAATTATTACAACGAGAACTTGAACGTTAACGAAGGAAACGAGCAGGCGTTGGACTTCGACGGTGAGGACGGCGAGAAGGTCGATTGTTACATCTGCAACAAGTCGTTCCCGAACGAGGATCATCTTATACGGCATCAGAGGAATGCTCATAAGtCTGAACAGGTACTTCCAGTGAACGTAGCGGGAGGCGGAAATGTACTGAGCGTCAACGGTAATGGCAATAAAGGGCAGTCTCATTTGTTTTACGTGTGCGAGCTTTGCGGCAGTTCTTACTCCAGTAAATGGGAACGTTGGCTGCACATCAATAACGCGCATAACGATGTATCTTCCATCAGGTGCGAATTCAAGGACTGTGGGAAGATATTCGCGACGAAGTCGTTGCGCAACGATCACATCCAGCACCATATGGTCCAAGGCGCCTCGCCGAACACCTGCGAGGTGTGCGGCAAGTTGTGGGCCACTCGGGTCGACTATTGGAAACACGTGATGGGAGTACATTCGGACACAGTGCCTAGGGTTTGTGGTGTTTGTCTAAAGATATTTCCGGACGTGATGCAGTTAAGCAGACACGTGAAGGAGAAACACTGGCCGTTGACCGGCGGCGATTTTTGCTGTGATATTTGCGGTAGGCCCTATTCCAATAAATCAAAGATGTCCCGGCATAGGAAGATCCACGGCTTGGAGGTGGACGCGTGTGATAATAGCAGCAGCATTAACGAAACGACCAACGAATCGTCCAAGCTCGATCACAACGGCGCCGCGGAGATCGAGCTGAGCTGCGACCAGTGTCCCGACCTCAAGTTCTCGACGCTGGACAGTTTGTGCAATCACAGACGTATAGTGCACAGTCTCTTCCCGTGCGACCTGTGCAACAAGTGCTACGGCAGAACGTCGCACTTGTGGAAACACGTGAACAGGGTGCACAAGGGTCACACGGACGTCACCTGTCCGTACTGCCTGAAGACCAGCGCCTCGCGGGATCACCTGATAGCGCATATCGCGAAGATCCACAGGTACGAGCCCGACGTGGGCAAGGACAGCATGAATTGCGCCACTCCGAAGTCCTCCAGCATCGACGACGGTGTCCTCCATTACTGCGAGAAGTGCAACAAAGGATTCCACAAGCGTTACCTGCTCAGGCGTCACATGAAGGGCTGCCAGAACTACCGCAAGGATCCGGGCGCGCTGTTGACCCGCTGCCGGGCCTGCGAGCGCATATTCAAGGATCGAGCGAGCCTGCAGAAACACATCGAGAATCATCACAGCACGTACACCTGCCACTTGTGTAACGAGACGATCACGTCCAAGTTGGGCATCATGACGCACAACCGCGTCAACCACATGGACCACCCGGACCTGACGTGCGACCACCCGAACTGCAAGAAGCTGTTTCGCACCAAGGAGGACCTGGAGTCGCATCGGAAGGACCACAAGCACCACACCAACCTGAACGTCTGCGACTTCTGCGGCGACACCGTGGAGAACAAGCTTAAGCTGAAGATGCACGTGCTGTCGTTGCACCGGAACGAGATCGGCGTGTCCTGCGGCGTCTGCCTGATACCCATGAAGGACCCGAAGGACCTGAAGAAGCACGTCGAGACGGAGCACAGCGGCGTTCTCTCCAAGCCGAACACGTGCCAGGTGTGCGGCAAACAGTACGCGTCCAAGTGGAAAGCCTTCGACCACACGAAGAAGTGTCACGGCAAGGTCTTCCTCACGTGCAAGCAGTGCCTGGCGGTCTTCACGGACGAGAACGACATACGCGAGCACTACGAGCACGTGCACAACGTGCCGAAGGACCAATTAGCCGCGTTCGAGTACAGGATGGACCTCGGCGCCAAGCGGGAGGGCTACGAGACCCCGGACATCATCGTGAAGGAGGAGCCGGACGACCTCGAGTTTGACGAGGAGCTGTGCGACGAGGACTCGAGCGACGCGAAGGGCAAACGGCCGGCGAGCGACACGTACGACTGCGAGATGTGTCCCGAGATGTTCCTCAACTCCGAGACCCTCTCCAAGCATTACCAGAACGTCCACAACACCGATCCGGTGCGCATGTTCAAGAAATTCAAGAAAGACAACGGCAAGCGCAAGATGAGGAATAGGAGCAACTTCGAGTGCAAGAACTGCAAGAAGCAGTTCTCCACCAAGACCCTGTTCTGGAATCACATCACGGTGTGCACGCGACGGGGCGTCCTGGGCAGGCTGGAGATGCCGAACATCCCGAACTCGATCCTGGAGTCCCACCTGAAGAACAACAATCAGATCAAGCGGGAAGAGCCGATGCTGATGGCGACGAACGAGTCGAATCTCAACATCCCCGACTTCAACTTGTTCGAGGACATCAATATGCAACTTTCGGCGCAGAAACCGGTGCCGAATCTCATGCCGTTGTCGCACATGAAGCCGGCGGGCAACGCCGGCAAGTGTTCGCGCAAGGACTCCCGCAAGGTGTACGACGAGTCGACCAACACCGAGTGCACCTGCGAGGTCTGCGGCAAGCAGTGGCCCGCCAAGAAGCACCTCTGGCAACACCTGATCCGCTTCCACCGGGCCGAGGCCGCCGTCACGTGTGGCGTCTGTCTCAAGCTCTGTAAGACCTACCAGGACCTGGCCGACCATCTGAAGGCCACCCACGCGGCCATACTGTCGTGCGAGGGCAACAATTTCACCTGCAAGACATGCGGCAGGTATCACAACGCGAGGAGCAAATTGTTACTGCACACCAGCATCCATATCGGCATCACTGGGAACCACTGTTGCCAAAAGTGCCAGCAAGGCTTCATCAGCGAAGAGAAGCTCGCCGAGCACGCGGCCGGCTGCAACGGCAAGTCCGAGTTCGAGGAGCACGCGGAGGACGACAACGGCGAGAagaacgacgacaacgacgagaagGGCAGTCTGATCGCCGACGAGACGTCGGTGATCGGCGAAGGGGACGAGGGTGACCTCGAGTCGGAGGCCGAAGGTAACGACGACGGCATCCACGAGGAGGACAGTAACAGCGACGACAACTCGGAAGACAGCGACGACTCGGATAGCAGTAACAGCAGCTCCAGCGATGAGGAggggggcggcggcggcgacgaagaggaggaggacgaggagaacgAGTCCGAGCCGGACACGAGGACCAACAGCAGAGCGACCGGTGACGTGTCGTGCAATTCCGAGAGCGTCGACGACTCCGACTCCGACGTGGAGATAAACGAGATCGAGGACAAGCCTGTAGTAAGTGATATCAACAGTTTTAGGATACGCGGCGTGCAGGAACAGCAGTCCGGCATGGGCGGTGGCAGGAGCGCGGAGAAACCGAAAGCCGATTTCGCGCCCGTCGTCACCGCCGAACAAGCTAAGCAGAATAATTTGAACAAGTTGATGGCTCCCCGCCCGCCCGCCAACACGGACGCGTTCAAGCCGTTGTATCTCGAGAAAACCGTCAAAGTCGCGGTGCGCGAGGTGAATTTGTCcgaggatgacgacgacaacgatgacgacgacaacaacgatGAGGGTCGTGAAAATGAGAATTACGAGGAAGAGGTGAAAGAAGAAGttgatgatgacgatgaggatgatgaggaggaagaggcggaggaggagaaggatagaagagaagaaagagaaagaggtgaGGGTAATAtcggtaataataacgatgatgataatgacgatgatgacaatgatgacgacgacgacgacgataacgataataatattattgttaacgATGACAAGGATGAagataacgacgacgataatgatgatgatgatgacgatgatgacgtcgataatgatgatgatgatgatgatgacaaCGGTAGTGGTGGTGGGGACGGTGTTGGCGATGGTAGTAATAATGTTGATGGTAACGATaatgataacgataataatgagGAAGGGAAAGAGCAGGAAGATGAGGAGGAAGAGatggaggaggtggaggaggaagaagaagaggaggaggaggaggatgaggaggaggaagaagaggaggaggaagaggaggaggaagaggaggaggaagaggaggacgatggagagcaggaggaggaggagcaagAGCAAGAACGAGAGCAAGAGAATGAGGACGATGATTATGGCGGCCCGCCCGTATTAAGCCCGGTAATGCCTCGGGAAAACGAGACGGAGGAGCAGAACGGTATGATGGACCGCACGAGGCACAAGCTCAGCCCTATGGTGCCGCTGAGCATGCACGTCGACAAGGGTCTGAACGAATGCGAGATCACGGAGATACAGAATGTGGAACACGCGGAGCAGCACGTGGTGGATGCTTCCTCGATATCGAACGCGCCGAATTTCTTCGCAGCCAACAACAACATCCTGCGCGTCATCTGGGACGAGGACTCGGACAACGCGGCGGCCGACGAggatcgcgagcgcgactgTGACTCTGAGATCGGCGGTATGCGGGTATTGGCCGGCAACGGGCAATTCTGCAAGATGGAGGCGAACGCGGATAGCGACGACTTCGAGGAAGATTCCATGAACGGCCACGAGGAAGGCCACGCGACGGTGGAAGATAGTGGTAGGGACGGGCAGATGCATTGCAATCTGGACGGGACTGTGTTAATGGTGGCTAATGATTCGGAAGGTAATCAGATTTTGATCGAACAAAACGTCTTAACCATTGGTAACGAGGACTCTAACGCCGAGACGGCGCAATATATTTACCCAGAGAGCGCGTACGAGATCGCAGATTACGCGAGCGCACGGAACGAAAGTGACGGCATGCAGACGGACGAGATACAGGGTATATCGTACGTACAGGATACGTcggagaacgaggaggaggaggaggaggaggaagaggaagaggaagaggaaggagaagaaggagaagaagaagaagatgaagatgaagatgaagaagaagacagCGTGGAGGAAGAAGACGTCGGGGAAAACGGTGATAACGCGCGAAAGTAG
Protein Sequence
MTTIESKVRYDELCRLCASYNAVKVDIFGPDGKDRQLVDKILVCLQFKISEDDGLPKSLCTRCVYNLENFYDFRTACINAVALLERCQPSRDAANNDGADNAAQCDEVHAEFLKEKKNTPVLIPEAPIVNPNAALGTPPRLNSDGEADPEVEEILDTSEGTDEATVVDDSEDRRSEYEYEMDMETNPSDFLEMTPMVTEDNEECDAKNIVATTPQDNNAAVFQHTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGEGDVIGEKVITDDHTSFKRPYQCDLCHKSYSTAKHRWGHVSTSHRGHPAVTCRYCSRIYSTRINLEEHVKSRHAGLPAPPPNLPVSFFRSDARHQCKTCPKVFVDQADFNAHSQICTEEQQRMALLEKIEPLQSNKSLADTSDISSIDTDDENKDYRNAEAKLAKNPQLTILKQALTKGESLKRDYDDSSTPDCKPRKIAKIDNCEANPPKRWYCEACPQSFTSVDSLKEHEITHEAEKPFICILCQKDFVLKSSLSRHIVTIHGVDPTPIVDSDKCLKRAVMPPSWNDQMDVSVYEQDEMKESREFSSSPEENLENDEKDSKNNHENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNTQLQNHVNMYHGGSKLLISEQRRYSCTICGRQHDSRKKLIAHVSIHNVDPAYDPAHFVQLNSNYYNENLNVNEGNEQALDFDGEDGEKVDCYICNKSFPNEDHLIRHQRNAHKSEQVLPVNVAGGGNVLSVNGNGNKGQSHLFYVCELCGSSYSSKWERWLHINNAHNDVSSIRCEFKDCGKIFATKSLRNDHIQHHMVQGASPNTCEVCGKLWATRVDYWKHVMGVHSDTVPRVCGVCLKIFPDVMQLSRHVKEKHWPLTGGDFCCDICGRPYSNKSKMSRHRKIHGLEVDACDNSSSINETTNESSKLDHNGAAEIELSCDQCPDLKFSTLDSLCNHRRIVHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHTDVTCPYCLKTSASRDHLIAHIAKIHRYEPDVGKDSMNCATPKSSSIDDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCDHPNCKKLFRTKEDLESHRKDHKHHTNLNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVETEHSGVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIREHYEHVHNVPKDQLAAFEYRMDLGAKREGYETPDIIVKEEPDDLEFDEELCDEDSSDAKGKRPASDTYDCEMCPEMFLNSETLSKHYQNVHNTDPVRMFKKFKKDNGKRKMRNRSNFECKNCKKQFSTKTLFWNHITVCTRRGVLGRLEMPNIPNSILESHLKNNNQIKREEPMLMATNESNLNIPDFNLFEDINMQLSAQKPVPNLMPLSHMKPAGNAGKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKTYQDLADHLKATHAAILSCEGNNFTCKTCGRYHNARSKLLLHTSIHIGITGNHCCQKCQQGFISEEKLAEHAAGCNGKSEFEEHAEDDNGEKNDDNDEKGSLIADETSVIGEGDEGDLESEAEGNDDGIHEEDSNSDDNSEDSDDSDSSNSSSSDEEGGGGGDEEEEDEENESEPDTRTNSRATGDVSCNSESVDDSDSDVEINEIEDKPVVSDINSFRIRGVQEQQSGMGGGRSAEKPKADFAPVVTAEQAKQNNLNKLMAPRPPANTDAFKPLYLEKTVKVAVREVNLSEDDDDNDDDDNNDEGRENENYEEEVKEEVDDDDEDDEEEEAEEEKDRREERERGEGNIGNNNDDDNDDDDNDDDDDDDNDNNIIVNDDKDEDNDDDNDDDDDDDDVDNDDDDDDDNGSGGGDGVGDGSNNVDGNDNDNDNNEEGKEQEDEEEEMEEVEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEDDGEQEEEEQEQEREQENEDDDYGGPPVLSPVMPRENETEEQNGMMDRTRHKLSPMVPLSMHVDKGLNECEITEIQNVEHAEQHVVDASSISNAPNFFAANNNILRVIWDEDSDNAAADEDRERDCDSEIGGMRVLAGNGQFCKMEANADSDDFEEDSMNGHEEGHATVEDSGRDGQMHCNLDGTVLMVANDSEGNQILIEQNVLTIGNEDSNAETAQYIYPESAYEIADYASARNESDGMQTDEIQGISYVQDTSENEEEEEEEEEEEEEEGEEGEEEEDEDEDEEEDSVEEEDVGENGDNARK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01087375;
90% Identity
-
80% Identity
-