Hsal006018.1
Basic Information
- Insect
- Harpegnathos saltator
- Gene Symbol
- -
- Assembly
- GCA_003227715.1
- Location
- NW:104901-126295[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 6.2e-06 0.0004 20.1 1.0 1 23 231 253 231 253 0.98 2 32 0.008 0.51 10.4 3.6 1 23 276 299 276 299 0.96 3 32 0.0011 0.068 13.1 0.3 2 23 306 328 305 328 0.96 4 32 7.4e-05 0.0047 16.7 0.3 1 20 348 367 348 369 0.94 5 32 0.0041 0.26 11.3 0.1 2 23 466 487 465 487 0.95 6 32 0.0089 0.57 10.2 0.3 2 23 494 516 493 516 0.90 7 32 0.00012 0.0075 16.1 0.1 1 23 588 611 588 611 0.96 8 32 0.0049 0.31 11.0 0.8 1 23 617 640 617 640 0.96 9 32 0.061 3.9 7.6 0.8 1 23 653 675 653 675 0.97 10 32 6.9e-06 0.00044 20.0 1.0 3 23 720 741 719 741 0.96 11 32 4.5 2.9e+02 1.7 0.2 1 23 773 796 773 796 0.90 12 32 0.19 12 6.1 1.1 2 23 803 826 802 826 0.91 13 32 1.4 89 3.3 0.0 2 23 835 857 835 857 0.91 14 32 0.017 1.1 9.3 0.1 2 23 864 886 864 886 0.94 15 32 8.8e-05 0.0057 16.5 3.2 1 23 894 916 894 916 0.97 16 32 0.096 6.1 7.0 0.2 2 23 949 972 948 972 0.93 17 32 0.00021 0.013 15.3 3.3 1 23 975 998 975 998 0.97 18 32 0.003 0.19 11.7 0.3 2 23 1005 1027 1004 1027 0.95 19 32 0.0009 0.058 13.3 3.9 1 21 1054 1074 1054 1075 0.95 20 32 0.0027 0.17 11.9 1.8 2 23 1089 1110 1088 1111 0.93 21 32 0.35 23 5.2 1.1 1 23 1114 1137 1114 1137 0.94 22 32 0.025 1.6 8.8 2.1 2 23 1144 1167 1143 1167 0.90 23 32 3 1.9e+02 2.2 0.2 2 23 1175 1197 1175 1197 0.94 24 32 0.63 41 4.4 0.0 2 23 1204 1226 1203 1226 0.93 25 32 0.22 14 5.8 2.7 2 23 1235 1257 1235 1257 0.96 26 32 0.81 52 4.0 0.7 2 23 1263 1285 1262 1285 0.91 27 32 0.016 1.1 9.4 0.3 1 23 1346 1369 1346 1369 0.95 28 32 0.00045 0.029 14.3 0.5 1 21 1395 1415 1395 1416 0.95 29 32 0.32 20 5.3 1.9 2 23 1520 1542 1519 1542 0.94 30 32 0.62 40 4.4 0.4 2 23 1549 1571 1548 1571 0.94 31 32 1.2 75 3.5 1.9 1 23 1582 1604 1582 1604 0.92 32 32 0.053 3.4 7.8 0.1 1 19 1611 1629 1611 1632 0.94
Sequence Information
- Coding Sequence
- atgatgacgacgatggAGTCGAGAGTGAGTTACGACGAGCTTTGTCGCCTGTGTGCGTCCTACAATGCCGCCAAGGTGGACATATTCGGGCCGGACGGCAAGGATCGTCAGCTCGTCGACAAGATTCAGGCGTGCCTACAGTTCAAGATATCAGAGGACGATGGCTTACCGAAGTCTCTGTGTCATAGATGCGTGTTTAATTTGGAGAATTTTTACGACTTTAGAACTGCTTGCGTCAATGCAGTCGCTTTATTAAAGAGATGTCAGCCACCAAGAGAAGCGACGAACGATGACGATGCAGATAATGCCGCACAGTGCGACGAGATGCACGCGGAGTTTTTcaaggagaagaaaaacaCACCAGTCCTTATTCCGGAGGCACCTATAGTCAATCCTAATGCAGCGTTAGGCACACCGCCGAGATTGAATTCCGATGGCGAGGCGGACCCCGAGGTCGAAGAGATCCTCGACACGAGTGAGGGCACAGATGAAGCAACGGTGGTCGACGACTCGGAAGATCGAAGGTCAGAGTACGAGTACGAGATGGACATGGAGACGAATCCCAGCGACTTTTTGGAGATGACGCCGATGGTAACCGAGGATAACGAGGAGTGCGACGCGAAGaacgtcgccgcgccgcctcaGGACACCGCTACTGTTTTTCAGCACACGTCGCAACAGCACGAGGTCTATGTCTGTTCTCTGTGTAACAAGGCCTTCAGCTCGAAAGGACATTTGTCCTTGCATGCGAGGATCCACGTGGGTGAGGGCGACGTGATCGGTGAGAAAGTTATCACTGACGATCACACGTCGTTCAAGCGACCATATCAATGCGATCTTTGTCACAAGTCGTACTCCACCGCGAAGCACCGATGGGGACACGTTTCTACGTCACATAGGGGACATCCTGCTGTAACATGCGGATATTGTTCGCGGATATACTCGACGCGGATAAATCTTGAGGAACACGTAAAATCGCGCCACGCTGGTCTACCAGCGCCTGCGAACTTACCGGTTTCGTTCTTCCGCCCGGAAGCGCGTTATCAATGCAAAACGTGTTCAAAGGTGTTCTCGGATCAAGCGGATTTCAACGCGCATAGCCAGGTCTGCACGGAGGAGCAGCGTATCGCTTTGCTGGAGAAAGTCGAGCCGCAAAACAATAAGAGCCTGGCCGACACGTCCGATATCTCCAGCATAGATACGGATGACGAGAACAAAGACTACAGGAACGCTGAAGCTAAACTAGCCAAAAATCCACAGTTGACTATACTGAAGCAAGCGTTGACTAAAGGCGAGAGTCTCAAACGGGACTACGACGATAGCTCGACGTCCGATTGCAAGCCAAGGAAATTAGCCAAGACGGATAATTGCGAAGCGAATCCCCAGAAGAGATGGTATTGCGAAGCGTGTCCGCAAAGCTTCACATCCGTAGACAGTTTGAAGGAGCACGAGATCACGCACGAAGCTGAGAAGCCGTTTATTTGCATACTGTGCCAGAAAGATTTCGTCGTGAAGTCATCGTTGAGCAGGCATATTGTGACGATGCACGGTGTTGATCCCATGCCCATTGTTGACAGCGATAAATGCCTGAAGAAAGTCGTGATGCCTCAGAATTGGAACGATCAGATGGACGTCAGCGTTTATGAGCAGGACGAGATGAAGGAATCGCGAGAGTTTTCGTCGTCGCCTGAGGAAAATTTGGAGAACGATGAGAAGGATATTAAAAACAATCACGAGAACATGATAGAAATAGAAACAGTATTTGTATGCGAAATTTGTACGAGAGATTTCAACGATCGCGCCTCGTTGTGGTTGCACATACGGGCGACGCATAAGGAATTCGCGGCGTTCGCCTGTGGAGTGTGCTTGAAGATTTGCTCCGATAACACGCAGCTTCAGAGTCACGTTAATATGTACCATGGAGGATCCAAACTTTTAATATCCGAACAAAGAAGGTACAGCTGCACAATATGTGGTAGACAGCATGACTCGAGGAAAAAGCTAATTGCTCATGTCTCGATACACAACATCGATCCTTCGTACGATCCAGCACATTTTGTACAGTTAAATAGTAATTATTACAACGAGAACTTGAACATTAACGAAGGGAACGAGCAAATGTTGGATTTCGATGGTGAGGACGGCGAGAAGGTCGATTGTTATATTTGTAACAAGTCATTTCCGAACGAGGATCATCTCATACGACATCAGAGGAACGCCCACAAGTCTGAACAGGTATTTTCGGAAGATGTTGCGGGAAGCGGGGGTGTATTGAGCGTCAACGGTAATGGCAACAAAGGGCAGTTCCATTTCTTTTTTGTGTGCGAGGTTTGTGGCAGTCCTCATTCCAGCAAATGGGAACGTTGGTTGCACATCAACAGCATGCACAGCGATGTATCCGCCATTAAGTGCGAATTCAAAGATTGTGGAAAGATATTCGCGACGAAATTGCTACGTAACGAGCATGCCCAGCACCATGTGCTACAAGGCGCCTCGCCGAACACTTGCGAGGTTTGCGGGAAACTGTGGGCCACTCGGGTCGATTATTGGAAGCACGTGATGGGAGTACATTCGGACACAGTGCCTAGGGTTTGTGGTGTTTGTCTAAAGATATTTTCCGACGTGGTACAGTTAAGCAGACACGTAAAGGAGAAACACTGGCCGTTGACCGGTGGTGATTTTTGCTGTGATATTTGCGGTAGGCCCTATTCCAATAAATCAAAGATGTCCCGACATAGGAAGATCCACGGCTTGGAGGTGGACGCGTGTGATAATAGCAGCATTAATGAAACGACCAACGAATCGTCGAAACTTGATCATAACGGTGCCGCAGAGGTCGAGTTGAGTTGCGACCAATGTCCCGACCTCAAGTTCTCAACGCTAGATAGTTTGGTCAACCACAGACGCTTGGTGCACAGTCTGTTCCCATGCGACCTGTGTAACAAGTGCTACGGCCGAACATCGCACTTGTGGAAGCATGTGAACAGGGTACACAAGGGTCACACGGACGTTACGTGTCCGTACTGCATGAAGACCAGCGCCTCGAGGGATCACCTCATGGCGCATATCGCCAAGATTCACAGGTACGAGCTCGACGTGAGCAAGAACCGTATGAATTGCGTCACGCGCAAGTCCTCCAGCACCGAGGACGGTGTCGTGCATTACTGCGAGAAATGCAACAAAGGATTCCACAAGCGCTATCTGCTCAGGCGCCACATGAAGGGCTGCCAGAACTACCGTAAGGACCCCGGCGCGTTGTTGACTCGTTGCCGGGCCTGCGAGAGAATATTCAAGGACCGTGCGAGTCTTCAGAAGCATATCGAGAATCATCACAGCACGTACACCTGCCACTTATGTAACGAAACGATCACGTCTAAATTGGGCATTATGACGCACAACCGCGTCAATCATATGGACCACCCGGATCTGACGTGCGAACATCCGAGCTGCAAGAAGCTGTTCCGCACTAAGGAGGACCTGGAGTCGCATCGAAAGGATCATAAGCACCACAGTAACCTGAACGTTTGCGACTTCTGCGGCGACACCGTGGAAAACAAGCTGAAGCTAAAAATGCACGTGCTGTCGTTACATCGTAACGAGATCGGAGTATCTTGCGGCGTTTGCTTGATACCCATGAAGGATCCTAAGGACCTGAAGAAGCACGTCGAGACGGAGCATAGCGGCGTTCTCTCCAAGCCGAATACGTGTCAGGTATGCGGCAAGCAGTACGCGTCCAAGTGGAAGGCTTTCGACCACACCAAGAAGTGCCATGGCAAGGTCTTCCTTACGTGCAAACAGTGTCTGGCGGTCTTCACGGACGAGAACGACATACGCGAGCACTATGAGCACACACACAATGTTCCGAAGGACCAATTAGCCGCGTTCGAATATAGGATGGACCTCGGGGCGAAAAGGGAGGGCTACGAGACCCCCGATGCATTCGTGAAGGAGGAGCCGTACGACCTCGAGTTCGATGAAGAGTTGTGCGACGAAGACTCGAACGACACCAGAGGCAAGCGACCGGCGAGCGACACGTACGACTGCGAGATGTGTCCCGAGATGTTCCTCAATTCCGAGACCCTCTCCAAGCATTACCAGAACGTCCACAACACCGACCCGGTGCGTATGTTCAAGAAATTCAAGAAGGACAACAGCAAGCGCAAGATGAGAAACAGGAACAACTTTGAGTGCAAGAATTGCAGGAAGCAATTCTCCACCAAGGCCTTGTTCTGGAATCACATCAGCATATGCACGCGACGGGGCGTTCTTGAGCGTAGACTGGACTCGCCGAACAACAACCCGAACTCGATCTTGGAAGCGCACTTGAAGAACAACAATCAGATCAAGCGAGAGGAGCCGATGTTGCCAACGAACGAGTCCAACCTCAACATTCCCGACTTCAACTTGTTCGAGGACATCAACATGCAGCTGTCGGCGCAGAAGCCAGTGCCGAATCTCATGCCGTTGTCGCACGTGAGGCCTACGACTGGTAATACGCGTCAATGCTCGCGGAAGGATTCGCGCAAGGTGTACGATGAGAAGACCAACACGGAGTGCACGTGCGAGGTCTGCGGCAAGCAGTGGCCAGCCAAGAAGCACTTGTGGCAACATTTAATTCGCTTTCATCGTACTGAAGCCGCGGTTACGTGCGGGGTGTGCCTGAAGCtctgtaaaacttatcaaGATCTGGCCGACCATCTGAAAGCCATCCACGCCGCCATTCTGACGTGCGAGGGCAACAACTTCACGTGCAAGATCTGCGGTCGGTATCACAATGCGAGAAGCAAATTACTATTACATACGAGTATTCACATTGGTATGCCCGGCAACTACCGATGCCAAAAGTGCCAGCAAGGTTTCATGAGTGAGGAGAAGCTGAACGAGCACGCGGCCAGCTGCAACGGCAAGTCTGAGTTCAGGAATCACGCGGAGGACGATAACGCCGACAAGaatgacgataacgacgagaaGGGTAGTTTAATCGCCGACGAGACATCAGTGATCGGCGAAGGCGACGAAGGCGACTTCGAATCAGAGGCCGAGGGCAACGAGGACATTCATGAAGAGGACAGTAACAGCGATGATAATTCGGAAGACAGCGACGACTCGGACAGCAGTAACAGTAGCTCCAGCGACGAGGACGGTGCgggcgaagaggaggaggacgaggaggaggatgaagaAGATGAGGAGAATGAGTCCGAGCCCGACACGAGGACCAACAGTCGAGCGACCGGTGACATGTCGTGCAATTCCGAGAGTGTCGACTCCGACTCAGAGATGGAGATAAGCGCGATCGAAAATAAGAGCGTAAGTGACGTCAACAGTTTCAGGATacgcagcagcggcggcggagacACCAGCATGTTGGGGCAGCCATCAGTGGACAGGAGCGCGGAGAATCCGAGAACCGATCTCGCGTCCGTCGTCAACACGACGGTCGCGGGACAGACCATGCAGAATAATATGAGCAAGCTGCTGGGTTCTCGCGCGCCTGTAAACACGGAACAATTTCAGGCATTATATCTCGAGGAGTCCGCTAAAGTCGCGGCGAACAATGTGGATTTGTCCGAAGATGACGATGAGGAGAATGAGGAGGACAACGATGACGATCACGAAAATGAAAGTAACGAGGTAGGggtgaaagaagaagaagaagaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaagaagaggaagaggaggaagaggaagaggaagaagaggaaagaaaaagaggtgAGGATAATATTGAtcataataatgataatgatgacgataacgataatgataataatgatgtTGATGATCATAAGGATAAGGAAAAAGATGACAATGATaatgacgatgacgaggacgacgatgacgatgacgataacgacgataaCAATGATGAGGGTGGTATCAACGATAGTCGTAATGACGGTtgtaatgataatgataatgaagaggaagaggaagagagggaggaggaggaggaagaagatgaggaggaggaggaggaggtagaCGACGATGAGGAAGAGGTGGAGGCAgaagaagagggggaggaggaggaggaggaggagcaggggCAAGAACAAGAGAATGAGGATGATGATTACGGTGGTCCGCCTGTATTAAGCCCGGTGATGCCGCAAGAGAACGGCTCAGAGGAGGAGCACAGCGGCACGATGGACCGCACGAGGCACGAGCTCAGTCCTATGGTGCCGTTGAGTATGCACGTGGACAGAGATCTGAACGAATGCGAGATAACGGAGATACAGAACGTAGACGGGGAGAACGTGGACGCTTCCTCGATCTCGAATGCGCCGAATTTTTTTGcagcgaataataataatatcctGCGCGTGATCTGGGACGAGGACTCGGACAATGCGGCGGGCGAtgacgatcgcgagcgcgactgcGATTCGGACATTGGCGGTATGGAGGTGTTGGCCAGTAACGGACAGTTCTGCAAGATGGAAACGAACGCGGAGAGCGACGACTTCGAGGAAGATTCCAGCATGAACGAGCATGAGGAGAATGCAACGGAGGACAATGGTAGGGACGGGGACGGCCAAATGCACTGCAATCTGGACGGCACTGTGTTAATGGTCGCTAATGACTCGGAAGGTAATCAGATTTTGATCGAGCAAAACGTCTTGACCATTGATAACGAGGACTCTAACGCTGAGGCGGCGCAGTACATTTATCCAGAGAGCGCGTATGAGATCGCGGATTACGCGAGCTCACGGAACGAAAATGATGGCATGCAGACGGACGAGATGCAGGGTATATCTTATATTCAAGACGCGTCGGAGAACGAAGAGGAGAGCGTGGAAGATGATACCGGGGAGAACGATGATAACACGCGAAAGTAA
- Protein Sequence
- MMTTMESRVSYDELCRLCASYNAAKVDIFGPDGKDRQLVDKIQACLQFKISEDDGLPKSLCHRCVFNLENFYDFRTACVNAVALLKRCQPPREATNDDDADNAAQCDEMHAEFFKEKKNTPVLIPEAPIVNPNAALGTPPRLNSDGEADPEVEEILDTSEGTDEATVVDDSEDRRSEYEYEMDMETNPSDFLEMTPMVTEDNEECDAKNVAAPPQDTATVFQHTSQQHEVYVCSLCNKAFSSKGHLSLHARIHVGEGDVIGEKVITDDHTSFKRPYQCDLCHKSYSTAKHRWGHVSTSHRGHPAVTCGYCSRIYSTRINLEEHVKSRHAGLPAPANLPVSFFRPEARYQCKTCSKVFSDQADFNAHSQVCTEEQRIALLEKVEPQNNKSLADTSDISSIDTDDENKDYRNAEAKLAKNPQLTILKQALTKGESLKRDYDDSSTSDCKPRKLAKTDNCEANPQKRWYCEACPQSFTSVDSLKEHEITHEAEKPFICILCQKDFVVKSSLSRHIVTMHGVDPMPIVDSDKCLKKVVMPQNWNDQMDVSVYEQDEMKESREFSSSPEENLENDEKDIKNNHENMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNTQLQSHVNMYHGGSKLLISEQRRYSCTICGRQHDSRKKLIAHVSIHNIDPSYDPAHFVQLNSNYYNENLNINEGNEQMLDFDGEDGEKVDCYICNKSFPNEDHLIRHQRNAHKSEQVFSEDVAGSGGVLSVNGNGNKGQFHFFFVCEVCGSPHSSKWERWLHINSMHSDVSAIKCEFKDCGKIFATKLLRNEHAQHHVLQGASPNTCEVCGKLWATRVDYWKHVMGVHSDTVPRVCGVCLKIFSDVVQLSRHVKEKHWPLTGGDFCCDICGRPYSNKSKMSRHRKIHGLEVDACDNSSINETTNESSKLDHNGAAEVELSCDQCPDLKFSTLDSLVNHRRLVHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHTDVTCPYCMKTSASRDHLMAHIAKIHRYELDVSKNRMNCVTRKSSSTEDGVVHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCEHPSCKKLFRTKEDLESHRKDHKHHSNLNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVETEHSGVLSKPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIREHYEHTHNVPKDQLAAFEYRMDLGAKREGYETPDAFVKEEPYDLEFDEELCDEDSNDTRGKRPASDTYDCEMCPEMFLNSETLSKHYQNVHNTDPVRMFKKFKKDNSKRKMRNRNNFECKNCRKQFSTKALFWNHISICTRRGVLERRLDSPNNNPNSILEAHLKNNNQIKREEPMLPTNESNLNIPDFNLFEDINMQLSAQKPVPNLMPLSHVRPTTGNTRQCSRKDSRKVYDEKTNTECTCEVCGKQWPAKKHLWQHLIRFHRTEAAVTCGVCLKLCKTYQDLADHLKAIHAAILTCEGNNFTCKICGRYHNARSKLLLHTSIHIGMPGNYRCQKCQQGFMSEEKLNEHAASCNGKSEFRNHAEDDNADKNDDNDEKGSLIADETSVIGEGDEGDFESEAEGNEDIHEEDSNSDDNSEDSDDSDSSNSSSSDEDGAGEEEEDEEEDEEDEENESEPDTRTNSRATGDMSCNSESVDSDSEMEISAIENKSVSDVNSFRIRSSGGGDTSMLGQPSVDRSAENPRTDLASVVNTTVAGQTMQNNMSKLLGSRAPVNTEQFQALYLEESAKVAANNVDLSEDDDEENEEDNDDDHENESNEVGVKEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEERKRGEDNIDHNNDNDDDNDNDNNDVDDHKDKEKDDNDNDDDEDDDDDDDNDDNNDEGGINDSRNDGCNDNDNEEEEEEREEEEEEDEEEEEEVDDDEEEVEAEEEGEEEEEEEQGQEQENEDDDYGGPPVLSPVMPQENGSEEEHSGTMDRTRHELSPMVPLSMHVDRDLNECEITEIQNVDGENVDASSISNAPNFFAANNNNILRVIWDEDSDNAAGDDDRERDCDSDIGGMEVLASNGQFCKMETNAESDDFEEDSSMNEHEENATEDNGRDGDGQMHCNLDGTVLMVANDSEGNQILIEQNVLTIDNEDSNAEAAQYIYPESAYEIADYASSRNENDGMQTDEMQGISYIQDASENEEESVEDDTGENDDNTRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01087375;
- 90% Identity
- -
- 80% Identity
- -