Basic Information

Insect: Odontomachus brunneus
Gene Symbol: -
Assembly: GCA_010583005.1
Location: NW:791683-796440[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.026 1.7 8.7 0.5 2 23 134 155 133 155 0.97

2 14 5.1e-06 0.00032 20.4 0.8 2 23 160 181 159 181 0.98

3 14 2.1e-05 0.0013 18.4 2.3 2 23 188 209 187 209 0.96

4 14 1.3e-05 0.00082 19.1 1.6 1 23 242 264 242 264 0.98

5 14 2.2e-06 0.00014 21.5 1.5 1 23 296 318 296 318 0.97

6 14 6.4e-07 4.1e-05 23.2 1.8 1 23 324 346 324 346 0.96

7 14 2.4e-05 0.0016 18.2 0.6 1 23 352 374 352 374 0.98

8 14 2.3e-05 0.0015 18.3 6.8 1 23 380 402 380 402 0.97

9 14 6.3e-08 4e-06 26.3 1.0 1 23 407 429 407 429 0.97

10 14 0.00011 0.0072 16.1 0.2 1 23 435 457 435 457 0.97

11 14 3.1e-06 0.0002 21.0 7.8 1 23 463 485 463 485 0.96

12 14 1.6e-06 0.0001 21.9 2.0 1 23 491 513 491 513 0.98

13 14 3.5e-06 0.00022 20.9 0.9 1 23 519 541 519 541 0.98

14 14 0.0019 0.12 12.2 3.4 1 23 547 570 547 570 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.026	1.7	8.7	0.5	2	23	134	155	133	155	0.97
2	14	5.1e-06	0.00032	20.4	0.8	2	23	160	181	159	181	0.98
3	14	2.1e-05	0.0013	18.4	2.3	2	23	188	209	187	209	0.96
4	14	1.3e-05	0.00082	19.1	1.6	1	23	242	264	242	264	0.98
5	14	2.2e-06	0.00014	21.5	1.5	1	23	296	318	296	318	0.97
6	14	6.4e-07	4.1e-05	23.2	1.8	1	23	324	346	324	346	0.96
7	14	2.4e-05	0.0016	18.2	0.6	1	23	352	374	352	374	0.98
8	14	2.3e-05	0.0015	18.3	6.8	1	23	380	402	380	402	0.97
9	14	6.3e-08	4e-06	26.3	1.0	1	23	407	429	407	429	0.97
10	14	0.00011	0.0072	16.1	0.2	1	23	435	457	435	457	0.97
11	14	3.1e-06	0.0002	21.0	7.8	1	23	463	485	463	485	0.96
12	14	1.6e-06	0.0001	21.9	2.0	1	23	491	513	491	513	0.98
13	14	3.5e-06	0.00022	20.9	0.9	1	23	519	541	519	541	0.98
14	14	0.0019	0.12	12.2	3.4	1	23	547	570	547	570	0.97

Sequence Information

Coding Sequence: ATGGAAGGTTTTAAGGTGAAAGATGAACCGATGGATGCATTAGCCATAGACAGTCAGGTTATGGATGAGAACATTGTGAGCGTCGTGCTTAAAGAGGAACCAGGTGACAGATTTGATCCCGACTACATGGAGGATATTTGCTCAGGCACTTTCGAGAAGGTATTTCTGCCTATCGAAAACAATGAAGTGGATTTCTCCAATGAAATGGTAAAGCTAGAGTTGGAAGGAGAATCTACTAGTCATCATAATTGGACGGCACAAATAAATGCCAATCTATGCGACAAAGAAGATAGTGTAATGCAACGATGTTTGgctaacacaaattttttacaagtgCAAGACCCTGAGAAGCATCACGGATTTTGTCAAAACGGGCAACaagcaaaattttataaaatacaatgcTCAATTTGCAAGAAGTGGTTTCTGAACAATGACTCCATGGTGACACATCTAAGAATGCATTGTAGCGGAAGTCAGTGCGAAGTTTGTCAGCAGAATTTTCCCGATAACTCCAGCTTACACGCTCACATGTTGACTCACGTTGGAATGAGCCCATTGGAATGCAACATCTGTCAAAAAAGATTCGCTTATAAATGGTGCTTGAGAAGCCACATGCAACTACACGTGTTGGACAAACCATACGATTGCGATGCGTTGCAGCAAGCTTTTATGAAGCGAGCAGGTATGAACGATCAGATGATGCATATCGAAGAGAGACCGTTCGAATGTGACGTATGCCACGCGTCGTTCAAGGAGAAGATTACTTTAAACCGGCACATGTCCAGCCATGTCGGAGACAGATCCTACAAGTGTGAAATCGCAGCGTTTAGAGAAAAAGCGAAACTGAACATGCATATGCCGCTTCATATGGGAAATAAACAATTCAAATGCACGCTATGTCACAGAGCATTTGCTCAAAAGACAGCACTTAACAATCATATGCTGGCGCACAGCGGTGAGAAGCCACACGCGTGCAACATTTGTGAGAAAACTTACAAGAGAAAATCAGAATTAATTAGGCATACTATGGTTCATACCGGTGAAAGACCGTACGAATGTAAAGAATGCTTGATGACTTTTCGCGAAAAGGCCAAATTAAATTCCCATATGCTAGTTCATACGGGGGAGAAGCCGCATGAATGTCACATTTGTCACAAGGCATGCGCACGGAAATCAGATTTAAATAGCCACATGTTGTTGCACACCGGCGGTCAATATGATTGTAAAGTCTGCGATAAGATTTTTACCAGGAAGTCGGATCTAAATAGACACACGCTGATACACACCGGTGAGAAGCCGTTCGCATGTGATTTATGCGACATGGCGTTCAGGGAAAAGACCAGATTGAACTCGCATATGCTCATACATACAGGCGACAAGCGACACGCTTGCCACATTTGCCACAAAACATTCAAGGAGAAGTCATCGTTGAGGAAACACATGTTAAGCCACACTGGTGACAGACCATACGAATGCTATGTGTGTCACAAAGCCTTCACGCAGAAGACCACGCTGACCAGCCACATTCTTGTTCACGCCGGTGAGAGACCCTTTGAGTGCAGTTCTtgtcaaaaaatattcaaagacAAAGCAGCGTTGAAAAAACACTTATCGATGCACGTTAATGAGAAAACTCACGAATGTCTTATCTGTATGAAAAAATTTGCCCATAAGACAGCATTAAATAATCACTTGTCCACGAGCCACATATCCTAA
Protein Sequence: MEGFKVKDEPMDALAIDSQVMDENIVSVVLKEEPGDRFDPDYMEDICSGTFEKVFLPIENNEVDFSNEMVKLELEGESTSHHNWTAQINANLCDKEDSVMQRCLANTNFLQVQDPEKHHGFCQNGQQAKFYKIQCSICKKWFLNNDSMVTHLRMHCSGSQCEVCQQNFPDNSSLHAHMLTHVGMSPLECNICQKRFAYKWCLRSHMQLHVLDKPYDCDALQQAFMKRAGMNDQMMHIEERPFECDVCHASFKEKITLNRHMSSHVGDRSYKCEIAAFREKAKLNMHMPLHMGNKQFKCTLCHRAFAQKTALNNHMLAHSGEKPHACNICEKTYKRKSELIRHTMVHTGERPYECKECLMTFREKAKLNSHMLVHTGEKPHECHICHKACARKSDLNSHMLLHTGGQYDCKVCDKIFTRKSDLNRHTLIHTGEKPFACDLCDMAFREKTRLNSHMLIHTGDKRHACHICHKTFKEKSSLRKHMLSHTGDRPYECYVCHKAFTQKTTLTSHILVHAGERPFECSSCQKIFKDKAALKKHLSMHVNEKTHECLICMKKFAHKTALNNHLSTSHIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01539746;
90% Identity: iTF_00452713;
80% Identity: -