Obru005675.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Odontomachus brunneus
Gene Symbol
tfip11
Assembly
GCA_010583005.1
Location
NW:1276473-1280692[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.4e-103 2.5e-99 331.7 16.8 1 275 390 658 390 658 0.99
2 2 0.0076 43 2.9 0.1 244 272 672 700 664 703 0.86

Sequence Information

Coding Sequence
ATGTCAGAGGACGAAATGGAAAGCTTTGAAATTACTGATTATGATTTGGACAATGAATTTAACACAGCCCGTCCCCGACGCAACCTCACGAAAAAACAACAAATGCTAGGGATGTGGGCTGATGACAGTGATGAGGATGAATTATCAGCAAGACCAtcttttaaaacttttaataaaggACCAAAAAACTATAGAGCACCAGTTAATTTTGTTGCTGGTGGTATTCAACAAGCAGGAAaatcaaaagataaaaaagaagataacgATGAAGAGGAAGATGAAAATGATATACGAGAGTCTAAACATCAGGATGATTCAAGCTCAGAAGATGAAAGATCAAGTAATTCAAAATCACAATCATCTTTTCCTTTGAATTTGGAGAGTGACATTGCAGGTCTGCGTAAAAAACGGAGTCAAATAAATCCATTATTGATGAAAACTGGAATGGGTAGCTGGGAAGTACATACAAAAGGTATTGGTGCCAAATTGTTATTACAGATGGGATTTGAACCTGGTAAAGGTTTGGGCAAACAGTTGCAAGGAATAAGTGCACCAGTGGAAGCACATCTCAGAAAGGGAAGAGGTGCAATTGGTGCATATGGTCCTGAGAAGGTACCTAAAATTCCAGATATAAAAAAGGATGACGATGGAGAAGAAGCAAAAGAACTAAAATCCAAAGTATCTCAGTGGCGGAAAGGTGATAGTAGcaacaaaaagaaaacgagaTATTATTACAGAAGTGTAGACCAAGTTCTCGAGGATGGAAAATTGAAGCCGAATAGAAAGTTTCCAGTATCCAGTGAGATGAGCAGGGTCAAGGTAATCGATATGACAGGGCCAGAGCAGAGAATTCTTAGTGGTTATCATGCAATTGCCGGTGGCCAGCAATGCCCAGACGAAGTCGTAATTACATCCGACAAGAAGTCTAAAGTAAACTTTGCCCTGCCTGAATTGCaacacaatttaaatttgctcGTGAGCATGTGTGAGCAAGATATTATTCAAAATGATCGGCGGATGAGGTATTTAAATGATAGAGTGGTTGCTCTACAGGCAGAAAAAAAGAACTTGTCTAAAGTTGTCGATCAAAATAGTAAACTAACTGATACCTTGGAGAATGTGCTCGTGATTGTGGATAGGTTAATGAACGAAACTAATGAGTTGACTCTGCAAGAAACTGCTGAAGCTTTCAAAAAtttagaagataattattacgaagagTATAAGATGTACGAACTTGGTGAATTAGCTAGCAGTTTTGTTGCCCCGAAAATAAAGGATTGCCTGTTGAGTTGGAATCCGTTGATGGAACCGAAGAAACCGATTAAATTGTTTGAAGAGTGGAAAGATATTTTGGAAAATGGAAGCAATACTACATTACAAACACGGACTATGCACCCGTACGATCAGTTAGTGTGGAATGCATGGATGCCATCGATCAGAGGAGCCATACAGCAATGGACATGTAGACAGCCTGAACCCCTAATCGAACTGATAGAGCACTGGATGCCATTATTACCCAATTGGATCTTGGAAAATATACTGGATTTATTAGTTTTACCGAAATTAACATTGGAGGTAGAAGAATGGAATCCTCTTACTGATACTGTACCTATTCATACATGGATTCATCCTTGGTTGCCATTATTACGAAATCGTTTGGATACATTAATTTATCCTATAATACGCAGAAAACTTGGATCTGCATTAGGAGGTTGGCATCCATCAGACAGATCTGCAAGACTAATGCTACAACCTTGGGCACAAGTGTTCGCCAAGGGAGACATGGAAGCGTTTTTAGTGAAGAATATAATTCCAAAATTGCAAATAGCTTTATCTGAATTTGTTATAAATCCACATCAACAGCATTTGGATCAGTGGAACTGGGTATACGAGTGGAAAGATTTGATCCCGCCCCATATAATGAGCGGATTGCTCGACAAGTTCTTCTTTCCAAAGTGGCTGCAAGTCTTGGCACTGTGGCTTAATCATTCTCCCAATTACGATGAAGTCACAACTTGGTATATGGGTTGGAAGGGAATGCTGAGTGACAAATTATTAGCAGAGCCGGCGGTAAAAGatCACTTTAAGAAAGCATTAGATATGATGAATAGGGCTGTCACCGGACCACAGAGTCATCAACCGGGCGCACTGGAACAGGTTTCATATCTAACGAGCTTAGAGAGAACTCAACCGACGATGTCACAAATGACACCAATTGCACAACCGCGGATAGAGAGACTCGCGGAGGCAGTGCGAACCGCTTCGCAGATCCCGCAAGGCTTCAAGGATCTTGTGCAAAAGAAATGCGAGGAACGTGGCATATTGTTTATGCCGATTCCGAACAGATACAAGGAAGCCAAGCAAGTTTACAAAGTGGGCAATGTTCAAGCGTACATCGATGGCAATGTATTATTTGTATGTCACAATGGTACAAACTGGATGCCAACGCATTTGAATGCCTTGTTGGATATGTCTGAACTTTAg
Protein Sequence
MSEDEMESFEITDYDLDNEFNTARPRRNLTKKQQMLGMWADDSDEDELSARPSFKTFNKGPKNYRAPVNFVAGGIQQAGKSKDKKEDNDEEEDENDIRESKHQDDSSSEDERSSNSKSQSSFPLNLESDIAGLRKKRSQINPLLMKTGMGSWEVHTKGIGAKLLLQMGFEPGKGLGKQLQGISAPVEAHLRKGRGAIGAYGPEKVPKIPDIKKDDDGEEAKELKSKVSQWRKGDSSNKKKTRYYYRSVDQVLEDGKLKPNRKFPVSSEMSRVKVIDMTGPEQRILSGYHAIAGGQQCPDEVVITSDKKSKVNFALPELQHNLNLLVSMCEQDIIQNDRRMRYLNDRVVALQAEKKNLSKVVDQNSKLTDTLENVLVIVDRLMNETNELTLQETAEAFKNLEDNYYEEYKMYELGELASSFVAPKIKDCLLSWNPLMEPKKPIKLFEEWKDILENGSNTTLQTRTMHPYDQLVWNAWMPSIRGAIQQWTCRQPEPLIELIEHWMPLLPNWILENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLPLLRNRLDTLIYPIIRRKLGSALGGWHPSDRSARLMLQPWAQVFAKGDMEAFLVKNIIPKLQIALSEFVINPHQQHLDQWNWVYEWKDLIPPHIMSGLLDKFFFPKWLQVLALWLNHSPNYDEVTTWYMGWKGMLSDKLLAEPAVKDHFKKALDMMNRAVTGPQSHQPGALEQVSYLTSLERTQPTMSQMTPIAQPRIERLAEAVRTASQIPQGFKDLVQKKCEERGILFMPIPNRYKEAKQVYKVGNVQAYIDGNVLFVCHNGTNWMPTHLNALLDMSEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00898736;
90% Identity
iTF_00769617; iTF_00452572;
80% Identity
-