Basic Information

Gene Symbol
lilli
Assembly
GCA_010583005.1
Location
NW:2135068-2428333[-]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.79 9e+03 -5.2 1.8 4 22 23 41 22 45 0.78
2 9 1.3e-07 0.0015 17.2 1.9 25 152 67 188 61 256 0.65
3 9 3.2e-10 3.6e-06 25.9 3.8 340 441 271 368 246 385 0.73
4 9 0.032 3.7e+02 -0.6 23.0 433 510 443 517 435 541 0.55
5 9 1 1.1e+04 -9.1 29.2 86 256 541 709 511 720 0.49
6 9 0.1 1.2e+03 -2.2 8.6 424 482 694 750 688 757 0.54
7 9 1 1.1e+04 -7.6 17.7 419 476 728 808 725 832 0.55
8 9 0.046 5.2e+02 -1.1 5.2 148 198 1077 1120 1046 1183 0.43
9 9 0.00021 2.4 6.6 11.5 101 219 1267 1377 1252 1406 0.57

Sequence Information

Coding Sequence
ATGCCTTCGCCCGGCGGATATTATGACGATAGGAATCCTCTGCTCAAGGGCACCTTATCGAGCGTGGACCGGGACCGGCTCCGGGAGCGAGAACGACAGGCCCGCGCGGCAATGTCGGTCCAGGCCGAGCAGGCGGGTGCGGGAGGTGGTCCTGATCCCAGACACCATCACCACGGCCACCATAACCACGTGCACAGCAACCTGCACGCGTCTAACTCATCGCTCTTCCGTGCTCCCGTCAGGGTGAACTCTGATAATCAGGATCGCACCACGCATGAGATCCAATTGAAGCTGGGCAACTACTCGCTGGTGAGGCACCTGCTGGACGATCCGAAGCGCCTCATCGGCATAGATGGTATCCCGCCGAGCCCAGCGCCCGTATCCTCGTCCTCTCCTAATCCTTCCGTATACAAGAGCGGCTCCACCTCCAGGAGTTCACCGGCTCCGCAGGAGTTCAAGAAGCCCAGTGGACTCAGAGCGAGCACCTCGTCTTCCACCTCTGGCGCCAGCATCTCCGGCGCCAGCACCTCCGGCAACAGCGCCTCTGGCGCCAGCACCTCCGGCCACCAACGAGGCAGTTTCGTCAAACCTGCCGACGGTAAGCCGCCCCACGTCTCCAGGGGCGGCTACCTTGGTCACGCGGTCAAGCACGCCGGCAACAGCGGCAATGATCATCGCAACCACGGCTTGCCTCCAACCAAGGGCCCACCACCTCCGCACATCTCGTCGGTGACCGTCAACAGCCGCATTCACACGTACGGCGAACGACTGCCCAGGTTACCTCTCGATAACGCGTCAAATTCGCGCTACGAGCCAGTGGGGAATTCGACGGCGGACgtggaaaatatattaaagGAGATGACAGTGCCACTCATGCCTTTGACAGCGATCGCGCAAACACCACGGAAGGAGCTCGATTCCAAGTTCACCTTCAACACCCATCTGCCGAAGTTGCCGGAGTACATGCTGGAGCTGTCCAAACCACAACGAGAGAGGCACGCCACCAGCAGACCCTCCGCTGATCTCGAGAAGGATCTGAGCTTGTCCGAGGACAGCGAGGATGAGGAGAACAAGGAAATATCGACGAGAACGCCGAGAGAAAACAGGAGCCCAGACCTTTCGGTCAAACTGGCACCGCCGGTAATGCTGGCGATGACaccggcgccgccgccgcctgtGGCGCCTATGTCGCCCATGGGAATATCACCCATGCGTATGTCACCGGCACAACTCAGCCCACACCGGTACCTGTCATCCCCGAAGCAAgtagcggcgacgacgacgattccgGAAGTAACGTTGTCCCCTCCAGCGGCTGACACTCTGCCGCCCAAATGCTCGCCACCGGCAAACCTGGCGAACCATCACCAGAGACCACCCAGTCCACCCGGTCAGGCGCCGCCGAGTTCCGGAAGCGCCAGCTCGAGCTCGGACTCCGGCTCGGATTCCGGCTCGGACAGCAGCGACGATTCCGAGGATGACGACGACAGGTCGGCGACACAGCCGGCCAAGGGACCGTCGACGCCACCGTCGGTGTCACCGAAGCTGGATAATCTCGTGGAGGAACCACCGCCTGCCGTGGAGGAGTCAAAGCGTCGCTGGGATCTCAGTTCCTTCTTCAACAAGAACCCTGCTTCGGTGCAGCATGGAGAACAGAATCCTGAGACTAAACCCGCCCAGgacaacgccaggcgaGAAGGTACTCCCGAGGCGACGAAGGAGACCAGACCGCATAGAGAACAACCCCACGACTGGAAACTAGACGAGGCCTTAAAGAGAACTCACAACGCGACGATGATAAGCCTTCTGAGCGATAGCGACCATCAGTCCGATCAGGGCAAGAGTCAGCTGGCCGAGGGCAATCGATCGCAGACAGAGAATGCGACGAAGGTCACCGATAACAAAAAACGCGGCCGGCCCAGAAAATCCATCAAGAGCCCGAAGCGCAACGAGCGCGCGTCAGATGAGAGCCTGAAGAGCAGCAAACCATCGCGCAGCAGGACGAGAGTtgtcaacaacaacaacaactcCGTTAAGAAAAAGCAACCCAAGTCGAAGGCGACGTTACACACGAGCGACGATGAAAGTGACAGTGACACGAGATCCCAGGGTGTGTCCAGCGGTTCCATCAGTGATCATCAGAACAACGTGCCGGTCGTGGGAGCAGCAAAGAGAAGCAGACTGAGCTTGTCGTCCAGCGAAGATGACACATCAAACCGAAAGAACAACAATAGTGCCTCCGAGAACGAGTCCGCGCGATGGAGAGGAGTCGCCGTCAAAAGGAACAAGCTGACGGATTCCCCGAAGAAGCAAGACAAGAGAAAGAGTTCGACCAAGGCCAAACCGAATAGAAGACCAAGGTCCAGAATGAACAACGGTGACTCGGATACTGAGAGCGAGTCCGAGATGTCCACAAGGAGTAATCGCAAACAGGTGGCTCGAGTCCCACCCAGACCTCGAGCGCCTCTCACCAGGGCGACGTCATTGGACAACCTGTCAGACAGTGACAACAGCCATGCTCCCAAGCTACAAGAGGAGGACGCTGGTAACGTACAGGACAAAAAGAAGAGTGACACGCTGCGTAAGCTCTTCTCATCGTCGAAAGGTGGCGGTAAAGGTGGCGGTAAGGGTGGAAAAGGTGGTAAAGGTGGTGGCAAATGCGGTATCTACGTGGAGGAATACACCAGCTCGGTGAACACACCGACCGGCGGGGACAGCCCGTACAAGAGGCCGTCGTCGCGTACATCATCCGGCAGCGTCGTACATTCGTTCCCGCCGCTTACCTACGGCGTGAACGGCGTACCACGACTGATATGCAAAATCGATCTCAACAAACTACCGCAGAATTGCGTGTCGCAATTATCGAGGGGTCAGGAACTCAGGCAGCGTACCGAATTGCCCAATACCAGGCCGTCTTCGAGGCAGGCTTCCAACTTGGCGACGCAACCGAGACCACCCACACCGGAGGAGGGTGAGATCGTCGACACGTCGTCACCCCAGCAGGTTATTCACCACACCGATGGGCTGCTGGGTGACGGTGATGTCAGGACTCGTACTGTGATCACGACCGAGCTGATATCGTCGGACTCAAAGAGCGGCGGTGCTTTGCTCGGTGGTGCTGGTGGTGCTAGTGGTGCCAGTATTGGTGGTAACGCGCTCAAAAGAAAACATATTCCGAGTTGTGGTTCTATAACTTTAAGTACTGTGTGTGCGGACACGAAAGCGAAAAGCTCGTCTGAGCGTgacaggaaaaagagaaaaagagagcatcCTGAAAAGGACGGTCAACCATCCAGATCTTCATCAAGTCAGCAGAGTGATATTCAGCCGACGAATCACGAAAGGGACGAAAAACAAAATATGAGTTTGTTGCCACCACCGGCGCCGTTGCAGCGCGTCTACTATTCTTATTTCAATACACAGAATGATGTCTTGGAGGACCAGGAGAGtatGCACGATTCGTGTCTCAGGGACCAGAACCAGTACCTGACCGAAGCTAAACGACTAAAGCATAGCGCCGACACAGAGTGCGAGCTTACGGCCCAGGGCATGTTGTACCTGGAGGCTGTTCTATACTTTCTGCTGACTGGCCACGCTATGGAGTCGGACCCTGTCACAGAAAGAGCGTCCTTCACCATGTACAAGGATACTCTTAGTCTCATCAAATACATCTCGTCGAAATTTAAAAGCCAACCGAATGACACTACTGAGAACAGTATACACAACAAGTTGGCCATCCTGAGTCTCTGGTGCCAGTCCCTCATATACTTGAAACTCTTCAAGATGCGCAAACAAGACATGAAGGAGTACCAAAAGATAATCAACGAGTACCAACAGAAGCCGCCATCGGCTCAGACGCCGCAGGGACAACAAGAAGGACAGGCGACCCCTTCCTTGTCGCCCACACCATCGCCTGCCAGTTCAGTAGGGTCTGTCGGCAGTCAAAGTTCTGGATACAGCAGCGGCGAACTGGCCAATCGAGGCGCGCAACAGAACCAACAGAATCAGCAGAATCAGCAGAATCAGCAGAACCAGCAGAATCAGAATCAGAACCAAAACCAGAATCAACCAGCAGTCCCATTTGTCAGCGTGCCACTGTCCGTTCATAACGCGATGGCGAAGCAGAGTCATCACTTCAGTTTCCTGATGAACTGTCATGACCTGTGGGACCAGGCAAACGCTATGGTTACAGATAATCATAGAGATTTCTTTATTGAGCTGGACGAGAAGCTGGGACCTCTAACGTTGAAAAGTTCGCTGCGCGATCTTGTGCGTTACGTTCAAGCCGGTATAAAGAAGTTACGAGCTCTCTGA
Protein Sequence
MPSPGGYYDDRNPLLKGTLSSVDRDRLRERERQARAAMSVQAEQAGAGGGPDPRHHHHGHHNHVHSNLHASNSSLFRAPVRVNSDNQDRTTHEIQLKLGNYSLVRHLLDDPKRLIGIDGIPPSPAPVSSSSPNPSVYKSGSTSRSSPAPQEFKKPSGLRASTSSSTSGASISGASTSGNSASGASTSGHQRGSFVKPADGKPPHVSRGGYLGHAVKHAGNSGNDHRNHGLPPTKGPPPPHISSVTVNSRIHTYGERLPRLPLDNASNSRYEPVGNSTADVENILKEMTVPLMPLTAIAQTPRKELDSKFTFNTHLPKLPEYMLELSKPQRERHATSRPSADLEKDLSLSEDSEDEENKEISTRTPRENRSPDLSVKLAPPVMLAMTPAPPPPVAPMSPMGISPMRMSPAQLSPHRYLSSPKQVAATTTIPEVTLSPPAADTLPPKCSPPANLANHHQRPPSPPGQAPPSSGSASSSSDSGSDSGSDSSDDSEDDDDRSATQPAKGPSTPPSVSPKLDNLVEEPPPAVEESKRRWDLSSFFNKNPASVQHGEQNPETKPAQDNARREGTPEATKETRPHREQPHDWKLDEALKRTHNATMISLLSDSDHQSDQGKSQLAEGNRSQTENATKVTDNKKRGRPRKSIKSPKRNERASDESLKSSKPSRSRTRVVNNNNNSVKKKQPKSKATLHTSDDESDSDTRSQGVSSGSISDHQNNVPVVGAAKRSRLSLSSSEDDTSNRKNNNSASENESARWRGVAVKRNKLTDSPKKQDKRKSSTKAKPNRRPRSRMNNGDSDTESESEMSTRSNRKQVARVPPRPRAPLTRATSLDNLSDSDNSHAPKLQEEDAGNVQDKKKSDTLRKLFSSSKGGGKGGGKGGKGGKGGGKCGIYVEEYTSSVNTPTGGDSPYKRPSSRTSSGSVVHSFPPLTYGVNGVPRLICKIDLNKLPQNCVSQLSRGQELRQRTELPNTRPSSRQASNLATQPRPPTPEEGEIVDTSSPQQVIHHTDGLLGDGDVRTRTVITTELISSDSKSGGALLGGAGGASGASIGGNALKRKHIPSCGSITLSTVCADTKAKSSSERDRKKRKREHPEKDGQPSRSSSSQQSDIQPTNHERDEKQNMSLLPPPAPLQRVYYSYFNTQNDVLEDQESMHDSCLRDQNQYLTEAKRLKHSADTECELTAQGMLYLEAVLYFLLTGHAMESDPVTERASFTMYKDTLSLIKYISSKFKSQPNDTTENSIHNKLAILSLWCQSLIYLKLFKMRKQDMKEYQKIINEYQQKPPSAQTPQGQQEGQATPSLSPTPSPASSVGSVGSQSSGYSSGELANRGAQQNQQNQQNQQNQQNQQNQNQNQNQNQPAVPFVSVPLSVHNAMAKQSHHFSFLMNCHDLWDQANAMVTDNHRDFFIELDEKLGPLTLKSSLRDLVRYVQAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00452568;
90% Identity
-
80% Identity
-