Basic Information

Gene Symbol
lilli
Assembly
GCA_001313825.1
Location
NW:132655-394904[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.79 8.1e+03 -5.1 1.8 4 22 23 41 22 45 0.78
2 9 3.9e-07 0.004 15.6 1.5 23 209 65 249 59 260 0.49
3 9 5.8e-10 6e-06 25.0 3.5 345 440 276 368 256 387 0.69
4 9 0.11 1.1e+03 -2.3 24.8 434 511 444 518 434 521 0.62
5 9 1 1e+04 -12.7 28.1 141 250 594 700 517 726 0.34
6 9 1 1e+04 -9.3 24.8 391 482 669 759 661 764 0.55
7 9 1 1e+04 -13.3 24.5 108 234 732 855 715 876 0.36
8 9 0.12 1.2e+03 -2.4 1.5 156 220 1103 1160 1058 1197 0.40
9 9 0.014 1.4e+02 0.6 2.0 168 221 1278 1331 1207 1349 0.49

Sequence Information

Coding Sequence
ATGCCTTCGCCCGGCGGATATTATGACGAGAGGAATCCTCTGCTCAAGGGCACCTTATCGAGCGTGGACCGGGACCGGCTCCGGGAGCGAGAACGACAGGCCCGCGCGGCGATGTCGGTCCAGGCCGAGCAGGCGGGTGCGGGAGGTGGTTCTGATCCCAGACACCATCATCACAGCCACCATAACCACGCGCACAGCAACTTGCACGCGTCTAGCTCATCGCTCTTCCGTGCTCCTGTCAGGGTGAACTCCGATAATCAGGATCGCACCACGCATGAGATCCAGTTGAAGCTGGGTAACTACTCGCTGGTGAGGCACCTGCTGGACGACCCGAAGCGCCTCATCGGCATCGATGGCATCCCGCCGAGTCCGGCGCCCATCACCCCGTCCTCGCCTAATCCTTCCGCGTACAAGAGCGGCTCCAGCTCCAGGAGTTCGCCGGCTCCGCAGGAGTTCAAGAAGCCTGGTGGACTCAGAGCGAACATCTCGTCTTCCACCACCTCCGGCGCCAGCATCCCCGGCGCCTCCGGCAACAGCGCCTCCGGTGCCAGCACCTCCAGCCATCAGCGAAGCGGTTTCGTCAAACCCGCCGACGGTAAGCTGCCCCATGTCTCTAGGGGCTGCTACCCTAGTCACGCGGTCAAGCACGCCGGCAACAGCGGCAACGATCATCGCAACCATGGCTTGCCCCCGGCCAAGGCCGGCCCACCTTCGCACAGCTCGTCGTCGGTGATCGCGGCCGGCAGCCGCATTCACACGTTCGGCGAACGACTGCCCAGGTTACCTCTCGATAACGCGTCCAATTCGCGGTACGAGCCAGTCGAGAATTCGACGGACGTGGAGAATATACTAAAGGAGATGACAGTGCCGCTCACGCCTTTGACAGCGATCGCGCAAACACCACGGAAGGAGCTCGAGTCCAAGTTCACCTTCAACACCCATCTGCCGAGGTTGGCGGACTTCCCCGTGATGGAGCTGCCCAAACAACAACGCGAGAGGCACGCCACCAGCAGACCTTCCGCTGATCTCGAGAAGGATCTGAGCCTGTCTGAGGACAGCGAGGATGAGGCGGATAAGGAAATATCGACGAGAGCGGCGAGAGAAACCAGGAGTCCGGAGCTTTCGGTCAAACTAGCAACGCCGGTGATGCTGGCGATGGCACCGGCGCCGCCGCCTGTGGCGCCCATGTCGCCGATGGGTATATCACCCATGCGTATGTCACCGCCACAGACGCTTAGTCCGCACCGGTACCTGTCGCCGCCGAAGCAGGTAACGGCGACGCCGATTCCGGAAGCAGTGCTGTCCTCCCCAGCGGCGGATCCTCCGCCGCCCAAATGCTCGCCACCGGCGACTCTGCCGAGCCACCATCAGAGGCCACCCAGTCCGCCCGGTCAGGCGCCACCGAGTTCCGGAAGCGCCAGCTCGAGCTCAGACTCTAGCGGGGACTCCGGCTCGGACAGTAGCGACGATTCCGAGGATGACGATGACAGGTCGGCGGCACAGCCTACCAAGGGGCCGTCGACGCCGCCGTCGGTGTCGCCCAAGTTGGATAATCTCGTGGAGGAACCTCCGCCCGCCATGGAGGAGTCGAAGCGCCGTTGGGACCTCAGTTCCTTCTTCAACAAGACTGCGGCGGTGCAGCATGGCGAGCAGAATCCTGAGACCAAACCTGTTCAGGACAACGCGAGGCGAGAAGGCACTCCCGAGGCAGCGACGAAGGAGACCAGGCCGCACCGAGAACAGCCCCACGACTGGAAACTAGACGAGGCCTTAAAGAGAACTCACAACGCGACGATAATAAGTCTGCTGAGCGACAGCGACCACCAGTCCGATCAGGGCAAGAGTCAGCTGGCCGAAGGCAATCGCTCGCAGACGGAGAAAACGACGAAGGTCGCCGATAACAAGAAACGCGGCCGGCCCAGGAAGTCCATTAAGAGTCCGAAGCGCAACGAGCGCACGCCCGATGAGAACCTGAAGGGCGGCAAGTCGCGTAGCAGGACGAGAGTTGTCAACAACAATAACagtaacaacaacaacaacaactcGGTGAAGAAGAAGCAGCCCAAGTCGAAGGCGACGTTAGCCACCAGCGACGATAACAGCGACAGCGATTCGAGATCACAGGGTGTGTCCAGTGGCGGCTCCATCAGCGATCATCAGACAACCAACAACGTGCCGGCGGTCGTGGTGGCATCGAAGAGAAGCAGACTGAGCGTGTCGTCCAGCGACGAGGACAGCGCGTCCAACAGGAAAAACAATAGTGCCTCCGAGAACGAGTCGGCGCGATGGAGAGGGGTCGCCATCAAGAGGAACAACAAGCTGACGGATTCGCCGAAGAAGCAAGACAAGAGGAAGAGCTCGACTAAGGCCAAGCCGAGGAGACCAAGGTCACGGATGAACAACGGTGACTCGGATTCCGAGAGTGGGTCCGAGCTGTCGAGGAGTAACCGCATCCAGGTTGCTAGAGTGCCACCCAGGCCTCGAGCGCCTCTCACCAGGGCGACGTCGGTGGATAACTCAGACAGCGACAACGGCCATGCGCCCAAGCTGCAGGAGGAGGACGCCGGCAACGTGCAGGACAAGAAGAAGAGCGATACGCTGCGTAAActcttctcgtcgtcgaagGGCGGCGGTAAGGGCGGCGGTAAGGGTGGGAAGGGTGGCAAGGGCGGCGGTAAATGCGGTATCTACGTGGAGGAGTACACCAGCTCGATGAACACACCGACCGGCGGTGACAGCCCGTACAAGAGGCCGTCGTCGCGCACGTCGTCCGGCAGCGCCGCACACTCGTTCCCGCCGCTCACATACGGCGTGAACGGTGTGCCGCGCTTGATATGCAAAATCGATCTCAACAAGCTACCGCACAATTGCGTGTCGCAATTGTCGAGGGGGCAGGAGCTCAGGCAGCGCACTGAACTTCCCGATACCAGGCCGTCCTCGAGGCAGGCTTCCAATCTGGCGGCCCAGGCGAGGCCGCCCACACCGGAGGAGGGTGAGATCGTGGACGCGTCGCCGTCCCAGCAGGTCATCCATCACACCGACGGTCTGCTGGGCGACGGTGATGTCAGGACTCGTACTGTGATCACGGCCGAGCTAATGTCGTCGGACTCGAAGAGCGGCGGCAGCGCCATGCTCGGTGGTGCTGCTGGCGGCGGTGCTGCTGTCGGTGGTAGTGGTGCTAGTGGTGCCAGTATTGGTGGTAACGCGCTCAAGAGAAAACATAGTCCGAGTTGTGGTTCGATGGCGAGTTTAAGTACTGTGTGTTTGGACGCGAAAGCGAAGGGCTCGGTCGAGCGTGacaggaagaggagaaaaagggaacACCCGGAAAAGGACGGCCTGCCGTCTAGATCTTCGTCGAGTCAGAGTGATATTCAGCCGACGAATCACGAAAGGGACGAGAAACTAAACACGGCCTTGctaccaccaccgccgcgACCGCAGCGCATCTACTATTCTTACTTCAACACGCATAATGATGTCTTGGAGGACCAGGAGAGGGACCAGAACCAGTACCTGACCGAAGCTAAACGACTAAAGCACAGCGCCGACGAGGAGTGCGAGCTTACGGCCCAGGGCATGTTATACCTGGAGGCTGTTCTATACTTCCTGCTGACTGGCCACGCCATGGAGTCGGACCCTGTCACAGAAAGAGCGTCCTTCACCATGTACAAGGATACTCTTAGTCTCATTAAATACATCTCGTCGAAATTCAAGAGCCAGCCGAACGACTCATCCGAGAACAGTATACACAACAAGTTGGCCATCCTGAGtcTCTGGTGCCAGTCCCTCATATACTTGAAGCTCTTCAAGATGCGCAAACAAGACCTGAAGGAGTACCAAAAGATAATCAACGAGTACCATCAAAAGGCGTCGCAATCGGCCCAGACGCCGCAGGCAATGCAGCAAGAGGGACAGGCGACCCCTTCCTTGTCGCCCACACCATCGCCTGCGGGTTCCGTAGGGTCCGTCGGCAGCCAGAGTTCTGGTTACAGTAGCGGTGAACTGGTGAACCGAGGTGCTGCGAACCAGAATCCCATCCCACCGGTCGTACCGCCAGTCCCATTTATCAGCGTGCCACTGGCCGTTCACAACGCGATGGCGAAGCAGAGTCACCAGTTCAGCTTCCTGATAAACTGTCACGACCTGTGGGACCAGGCAAATGCTATGGTTACAGATAATCATAGGGATTTCTTTATCGAGCTGGACGAGAAGCTGGGACCCCTAACGCTGAAGAGCTCGTTGCGCGATCTTGTGCGTTACGTTCAAGCCGGCATAAAGAAGTTACGAGCTCTCTGA
Protein Sequence
MPSPGGYYDERNPLLKGTLSSVDRDRLRERERQARAAMSVQAEQAGAGGGSDPRHHHHSHHNHAHSNLHASSSSLFRAPVRVNSDNQDRTTHEIQLKLGNYSLVRHLLDDPKRLIGIDGIPPSPAPITPSSPNPSAYKSGSSSRSSPAPQEFKKPGGLRANISSSTTSGASIPGASGNSASGASTSSHQRSGFVKPADGKLPHVSRGCYPSHAVKHAGNSGNDHRNHGLPPAKAGPPSHSSSSVIAAGSRIHTFGERLPRLPLDNASNSRYEPVENSTDVENILKEMTVPLTPLTAIAQTPRKELESKFTFNTHLPRLADFPVMELPKQQRERHATSRPSADLEKDLSLSEDSEDEADKEISTRAARETRSPELSVKLATPVMLAMAPAPPPVAPMSPMGISPMRMSPPQTLSPHRYLSPPKQVTATPIPEAVLSSPAADPPPPKCSPPATLPSHHQRPPSPPGQAPPSSGSASSSSDSSGDSGSDSSDDSEDDDDRSAAQPTKGPSTPPSVSPKLDNLVEEPPPAMEESKRRWDLSSFFNKTAAVQHGEQNPETKPVQDNARREGTPEAATKETRPHREQPHDWKLDEALKRTHNATIISLLSDSDHQSDQGKSQLAEGNRSQTEKTTKVADNKKRGRPRKSIKSPKRNERTPDENLKGGKSRSRTRVVNNNNSNNNNNNSVKKKQPKSKATLATSDDNSDSDSRSQGVSSGGSISDHQTTNNVPAVVVASKRSRLSVSSSDEDSASNRKNNSASENESARWRGVAIKRNNKLTDSPKKQDKRKSSTKAKPRRPRSRMNNGDSDSESGSELSRSNRIQVARVPPRPRAPLTRATSVDNSDSDNGHAPKLQEEDAGNVQDKKKSDTLRKLFSSSKGGGKGGGKGGKGGKGGGKCGIYVEEYTSSMNTPTGGDSPYKRPSSRTSSGSAAHSFPPLTYGVNGVPRLICKIDLNKLPHNCVSQLSRGQELRQRTELPDTRPSSRQASNLAAQARPPTPEEGEIVDASPSQQVIHHTDGLLGDGDVRTRTVITAELMSSDSKSGGSAMLGGAAGGGAAVGGSGASGASIGGNALKRKHSPSCGSMASLSTVCLDAKAKGSVERDRKRRKREHPEKDGLPSRSSSSQSDIQPTNHERDEKLNTALLPPPPRPQRIYYSYFNTHNDVLEDQERDQNQYLTEAKRLKHSADEECELTAQGMLYLEAVLYFLLTGHAMESDPVTERASFTMYKDTLSLIKYISSKFKSQPNDSSENSIHNKLAILSLWCQSLIYLKLFKMRKQDLKEYQKIINEYHQKASQSAQTPQAMQQEGQATPSLSPTPSPAGSVGSVGSQSSGYSSGELVNRGAANQNPIPPVVPPVPFISVPLAVHNAMAKQSHQFSFLINCHDLWDQANAMVTDNHRDFFIELDEKLGPLTLKSSLRDLVRYVQAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01087191;
90% Identity
-
80% Identity
-