Oleu017283.1
Basic Information
- Insect
- Ochropleura leucogaster
- Gene Symbol
- retn
- Assembly
- GCA_958449745.1
- Location
- OY288217.1:11671153-11678755[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 3.3e-16 60.2 0.0 17 89 22 92 16 92 0.94 2 2 4.1 1e+04 -2.3 0.0 25 38 219 232 181 235 0.55
Sequence Information
- Coding Sequence
- ATGGTATCGTCAAAACGTGATAGATTAGCAGTAATAGCCAACCCATCTAATAACAAAATACCAGGCACTCCAATCAATCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTATGAGCTGTACAACCTGGTGATTGCTCGCGGCGGGCTAGTGGAGGTCATTAATAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCGTCGTCCATTACGTCTGCTGCGTTTACGTTACGCACACAATacatgaaatatttgtatgactacGAGTGCGAGAAGAAGAACCTATCAACCCGGAGTGAGCTGGATGCCGCCATTGAAGGCAATAAGCGTGAAGGCCGTCGCGCCTCAGGGCAGTACGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAATCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCTCTGTCGCTGGGGGGCGTGGCCCCGCGCCTGCCGCCACTACCGCCGCACGCGCCTCACCTTGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCCCCCAGCAACGGCCAAGCACCAATAATGTCACCTCGCGACGCCGCCCTCAGTGCCATCGACGTTTCCCGCCTCACCCTCTGGTCGCTCtacaacaataacaataacaacaGCCCACAACCGGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTCACGAGCAGCGGCAAGCGCGAGGCGTGCCgctcgcccgcgccgcccgccaaGCGCCGCACGCCGCGCCCCGCGTCCCGTCCCCCCTCGCCGCGCGACCACCTGCACTCGCCGCCGCAGCACCGCCACAGCCGCCGGGACGCCACGTCGCCGCCACAGATCAACGGCATGCCCAACACTAATGGTGTCAATGGAGCTGCCTTTAAAATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAATTAGTAGTGTCAATAGAGCTGAATGGAGTAACGTATGAAGGAGTACTCTTCCCCTCAGGCAATGGTCAAAACGGACACAGACAAATGGTGTCctaa
- Protein Sequence
- MVSSKRDRLAVIANPSNNKIPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQAPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTSSGKREACRSPAPPAKRRTPRPASRPPSPRDHLHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -