Basic Information

Insect: Ochropacha duplaris
Gene Symbol: -
Assembly: GCA_951361185.1
Location: OX592714.1:6187842-6213517[-]

Transcription Factor Domain

TF Family: MBD
Domain: MBD domain
PFAM: PF01429
TF Group: Unclassified Structure
Description: The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.3e-16 3.4e-12 46.4 0.0 7 70 221 282 217 287 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.3e-16	3.4e-12	46.4	0.0	7	70	221	282	217	287	0.89

Sequence Information

Coding Sequence: ATGGGAGATGAACCTCCAGAACTAGAAAATGTGGCAGAAGAAGCCCCAGGACCTCTTACAGATGCGATAAAGTCAGATTGCAAGCTTGAATTTGAAGTAGAACTCATTTCAGAAGCCCCATCTGACGTTGAACCTGTAACTGACCCAGAAACCAAAACTGACTCAGAAATCAAAACTGACTCAGAATTAAAAAGTGACTTAGAAGATAAAACTGACTTAGATGAAAAAACTGACATTGAAGTGAAATTAGAACTTATAACAGACCAAGTGGACAGTgcaaaagtggagcaagatgaAAATGTAAAGCGAGGAGTGAAGCGTAGGGCTTCTGCTGCATTTAGTGATGTTGGTGATGAAGACTTCAAAGGTTTTATGCTGTCCGATGCAAATGATGTTACTACAAAGTATAGTCAAGTATtggAACGCCTGGAGGAGGAAGTGTTGATAGCCAAGAATATTGTGCCGCTGAGGCAAGTGATGGGAACACCTAATGCACCTGTCAGGGCTTCAAAGAGACCGCGTAAGGATACTGATGGCTCAAGACCCTCATCAGCCTTATCATCGAGGTCTGAGGGTGAAGGATACTCTGATACGCTAAGTGCGGGCACGTCGCCCCTGGGCCGGGGCCGGCGCGCCACTACGGAGATGTCGTCGCCGCTTCTGCGCGTGCCGCTGGAGCGCGGGTGGCGGCGCGAGCTCGTGTACCGCGCCGCGCTCGACGCGCACTCGCGTCGCAACGCCGACATCTACTACTACACACCATATGGGAAGAAGCTGAGATCCACGCGCGAgGTTGCTGAGCACCTCTCGGGGACCGGGCTGACGTTAGAAAACTTTTCCTTCTTCAAGGAACCGCTCGGGGTCGATGACCCTGAGAAAGAGATCATTCGTGATGCAAAGATGATACGTCGCGGTGAATCCCCGGTGTCGTCCCCAGCGGCGGTGGCCCCCGTCGACACCAAGCGCACGCCCAAGCACAAGCCCCCCAAGGGCGCCAGCCCAGAGCCCGCAACGCCCAAGTCACCGCCTGCTAAAATTAAGGTGAAATCAATGGGCTCCCGGCTGAGTGGCAGCGGAGCACCCGCCGCCTCTCCTGCCAACAAACAGAAGAAACCACAGACACCTGACAACAACAATACTGCCGCCTGGAAGAAACCCAGGGCCGTCCCGCCGGCCCCGCTCGCCCCGCTGTCCACGGTGGCGATCGCCCCGGTCACCACGGCCGCCCCTGTGGCCACGGTTGCCCCGGTGTTGCCGCCGCCGCCCCTGCTGAGTCGCCCGCCCGTGCAGACATCCCCTGATGTTAAGCCACGGCGGCAAGTGGTACAGCCGTGTTCAATGTCGTGTGGTCGCGGCGCAGTGCCCTCTCTAGCCTGCGCCTTGTGCCTGTGTCTGTACCACCCGGCGTGTGCGCAagcccccgcccccgcccccggcGCACACTCCACGCCCTTCCTGTGCCAGAACTGTCGTAAATCACCGTCACCGCCGCCCTCTCCTCCGCCGCTGACGCACAAGTCCGGCGTTTCCGCACCGGCCACACTAGCGCCCGCACCGCCGACCGCTGCGGCAGCCACACCCGCACCGAGACGCGTGCCCGGACCGGTGCCGATACCTGttccggtgccggtgccggccAAGAGGCAAGATAAACGGGTGCTGTTGAGAATGAAGGTGGCAGGCGGTGGTGCGGACGGGAGCCGGGTATGGGCAGTAGCGGCACCTCGCGCGCCCGCACCCGCAACGCCCGCAGTAGCCGCAGCGCCCGCAGTATCTGCAGCGCCCGCAGCGGGCCGGCCGCACCTGCAGCGCGGGACCCTGCCGCAGTCGCTGGCCGTGCTCAACGGACGCAGGTTCATCGTCGTGCCTAGAGCGCCGCCGCTGCATCAACTcGAGGAGAAACGTCCAGTACGCGGGCGCGTGGGCGTGGCTAATGGTGCGACTAACAACGCTTCCCCCGCGTGTGGGTCGCCCCGGCGCCGGGGCCGTCCGAGGGTCGATGACACCGACTACTTCACAGCCTTCTACAACAAAGCGCAAGAGAGGAACTATAATGTTGTTGTACAGATATTCCAGTACCTGGGTATGCGTGAGTTGTCGCACAGTGCCCGCACGTGTCGACTGTGGCGCGACCTCGCCGCCACGCCCGCGCTGTGGAGACATGTACGCATGAAGAACTCACATGTGAGCGACTGGGGCGGGTTGTGCGCCGCGCTAAAGAAGCACGGCACGAAGCGGCTGGACCTACGTAAGATGCTACTCCCGCAAAACGACACCGTGTTCTGGGAACAATTCGCGCAACACATATCTACTGTCGATTCGTTAGAGAGGATAGAGATGTGCCGTTGTCCCGCCCGTGCAGTGGAAGCGGTGTGCCGCGGTCTGCCCGGGCTTCGTGCGTTGTCGGCGCTCGCGATCCGCGACGCGCTCCTCGACCCGGCGCCGCTCGCCGCGCTGACCATGTTGCACGAGCTGCGACTCAAGAGCATGGCCGGGCTGTCGCTCACGCAGGACCTGAGACACCTCGCCGCACTCACGCGGCTGCAACATCTCTCGCTCACATCCATCAAGGAGCTGGGGTGGTGCGCGTGCGACGTGATCGGATCGCTGCCGCAGCTAGAATCCCTGGAACTGGGCGAGTGCTCGTTCCGGGCGGAGTTTGCGAGTGCGGTGTCGCGGCTGGTGCGCCTGCGCCGGCTACGACTGGAGCGAGGCACCGCCACCTGCGCCGCGCCCGCCGTGCTGCGCGCACTCTCACGCCTGCCGCTACTCACCAGGCTCGAGCTCGTCAACGTAGACGTTAAGGTCGGATTCGACGACGCACTCGCTGAATGCAAGAATATACAGCGATTGCTCATCATACCCACATATGTTTCACAATCGGCAACCACTAACAAACAGGTCCTAAGTGGCGTCCTCCGGCTCAAAGACACCCTAACGCACCTAATGTGGGGCGTGACCATAGAGCTGCTGCGCGTCACAGAACTGTTCATAGACCAGTGCGAGCAGGGCGGCGATGCGAAGAAGCGTGACATCGGCGAGTGCATCCCTGTACTCAAACCTGTGCCGGGGTGCAAGCTGCCGGACGAACATCACCATGTCGCTGGACCGCCGCAGGTGGAAATCCTCCCGTTGCCGACCCTACAGCGCCTCCTGTCAGCACAGTTGCCGAACACGAAACTAAAAATCCTGCGCATCCCGTTCCACGCTACCTGGCGGCAGTCGCTCGCGGACTTTCAGTAG
Protein Sequence: MGDEPPELENVAEEAPGPLTDAIKSDCKLEFEVELISEAPSDVEPVTDPETKTDSEIKTDSELKSDLEDKTDLDEKTDIEVKLELITDQVDSAKVEQDENVKRGVKRRASAAFSDVGDEDFKGFMLSDANDVTTKYSQVLERLEEEVLIAKNIVPLRQVMGTPNAPVRASKRPRKDTDGSRPSSALSSRSEGEGYSDTLSAGTSPLGRGRRATTEMSSPLLRVPLERGWRRELVYRAALDAHSRRNADIYYYTPYGKKLRSTREVAEHLSGTGLTLENFSFFKEPLGVDDPEKEIIRDAKMIRRGESPVSSPAAVAPVDTKRTPKHKPPKGASPEPATPKSPPAKIKVKSMGSRLSGSGAPAASPANKQKKPQTPDNNNTAAWKKPRAVPPAPLAPLSTVAIAPVTTAAPVATVAPVLPPPPLLSRPPVQTSPDVKPRRQVVQPCSMSCGRGAVPSLACALCLCLYHPACAQAPAPAPGAHSTPFLCQNCRKSPSPPPSPPPLTHKSGVSAPATLAPAPPTAAAATPAPRRVPGPVPIPVPVPVPAKRQDKRVLLRMKVAGGGADGSRVWAVAAPRAPAPATPAVAAAPAVSAAPAAGRPHLQRGTLPQSLAVLNGRRFIVVPRAPPLHQLEEKRPVRGRVGVANGATNNASPACGSPRRRGRPRVDDTDYFTAFYNKAQERNYNVVVQIFQYLGMRELSHSARTCRLWRDLAATPALWRHVRMKNSHVSDWGGLCAALKKHGTKRLDLRKMLLPQNDTVFWEQFAQHISTVDSLERIEMCRCPARAVEAVCRGLPGLRALSALAIRDALLDPAPLAALTMLHELRLKSMAGLSLTQDLRHLAALTRLQHLSLTSIKELGWCACDVIGSLPQLESLELGECSFRAEFASAVSRLVRLRRLRLERGTATCAAPAVLRALSRLPLLTRLELVNVDVKVGFDDALAECKNIQRLLIIPTYVSQSATTNKQVLSGVLRLKDTLTHLMWGVTIELLRVTELFIDQCEQGGDAKKRDIGECIPVLKPVPGCKLPDEHHHVAGPPQVEILPLPTLQRLLSAQLPNTKLKILRIPFHATWRQSLADFQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01416802; iTF_00007109; iTF_01437069; iTF_01415862;
90% Identity: -
80% Identity: -