Osyl014967.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ochlodes sylvanus
Gene Symbol
-
Assembly
GCA_905404295.1
Location
FR990127.1:2412596-2420162[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 1.9e-06 0.00017 22.4 2.8 1 23 198 220 198 220 0.98
2 28 0.0016 0.14 13.2 1.2 2 21 257 276 256 277 0.92
3 28 3.3e-05 0.0028 18.5 0.1 2 23 302 324 301 324 0.96
4 28 6.8 5.9e+02 1.8 0.4 2 19 349 366 348 368 0.81
5 28 0.0036 0.31 12.1 0.9 1 23 379 401 379 401 0.97
6 28 0.19 16 6.7 0.0 1 23 419 441 419 441 0.95
7 28 0.0009 0.078 14.0 1.2 2 23 479 500 478 500 0.95
8 28 0.00018 0.015 16.2 2.0 2 23 543 565 543 565 0.97
9 28 0.0011 0.093 13.7 1.2 1 23 615 638 615 638 0.95
10 28 0.0038 0.32 12.0 0.1 1 23 694 716 694 716 0.97
11 28 0.002 0.17 12.9 6.5 1 23 727 749 727 749 0.99
12 28 0.077 6.6 7.9 1.8 2 23 761 782 760 782 0.96
13 28 0.0046 0.39 11.8 0.7 1 23 792 814 792 814 0.98
14 28 0.018 1.6 9.9 6.9 1 23 843 865 843 865 0.96
15 28 0.00069 0.06 14.4 1.8 3 23 878 898 877 898 0.99
16 28 9.6e-06 0.00083 20.2 0.9 1 23 906 928 906 928 0.98
17 28 0.011 0.9 10.6 0.2 2 23 948 970 947 970 0.97
18 28 0.31 27 6.0 4.2 1 23 1017 1039 1017 1039 0.97
19 28 0.054 4.6 8.4 4.8 3 23 1051 1072 1051 1072 0.95
20 28 0.0022 0.19 12.8 0.3 1 23 1094 1116 1094 1116 0.97
21 28 8.8 7.5e+02 1.4 3.9 2 23 1159 1181 1158 1181 0.94
22 28 0.0018 0.16 13.0 1.7 2 23 1197 1218 1196 1218 0.94
23 28 0.91 78 4.5 3.8 5 23 1228 1246 1225 1246 0.94
24 28 0.013 1.1 10.4 0.8 2 23 1257 1279 1256 1279 0.95
25 28 1.7 1.5e+02 3.7 4.8 2 23 1296 1314 1296 1314 0.89
26 28 0.12 10 7.3 0.5 2 23 1389 1410 1388 1410 0.93
27 28 0.034 2.9 9.0 0.3 2 23 1421 1443 1420 1443 0.96
28 28 7 6e+02 1.7 3.6 2 20 1481 1499 1480 1501 0.91

Sequence Information

Coding Sequence
ATGGCACTCAAACTGGGAAAATGCAGACTGTGCCTCAAGCTTGGCGACTTCTACTCCATCTTCACGATGGACAACAATTTACAGCTCGCCGAAATGGTTATGGAGTGTACCAAAGTGAAAGTTTACGAAGGCGATGGTCTCCCAGATAAAATCTGCTCAGAATGCGTCCAAAAGCTCAGCAGTGCTCATATTTTCAAACAACAATGTGAGAGGGCTGATGAAGAGTTGCGTCGCAACTACATTCCACCGCCAGGATTCAGTATTACTCCACCGCCAGCTGCAAACAGACATAGTAGTGATTCGGCGTTTTCTAACAATACTGATGTGTCTAATAAACCTTCACCATCTACCGAAACTATACCCACACCAATCAGTCGTAATCGAAAAAGAAGCCACGAGAGTCTGGACAATGCTTCTACGAGTAGCCAATCCCACGAAATCCGACCCAGCACCACTAAACGTGTTCAGGAACTTAGAAAACCTTCGAAGACTCAGAAGCGACAGAAGACGAGTTACTATACGGATTCGGATTATGATTACAATAGCCCATCGCATATGTCTGTCGAAACTGACTCCGATGACTTCCTGGAGCACAGGTGTAAGGAGTGTGACAAACGCTTCGACACCAGTAGGGGTTTAATAAATCACATGAGGATGCACGAAAGAGCAGCGAAGCAGGAAAGTATGAGCGAAAATGAAACTACTGTGAATACTACTCCGCAACATTCGAAACATTCTGAGGATGCGACCGATGTGGACGACAAGTTGAGTTGTGACCGATGTGGGAAAACGTTCAAACTGAAGATCATGTTAAAGCGCCACCACGACACTTGCTCCTCACCGCCCTTGAAAGAACTCAAAGTGTCCCTTGAGCCAATAGACGGGAAGGTCGGAACGAAAATTGAATGTGATATATGTAACGCGAAATTTAAATCCGCGGATAACCTAGATAAGCATTTGCGAGTGGTACACGCTGCCGCTCCTAAGAAGGAAAAAGTTACTCAGCCACAAACACCACAACCAGAGAACGGTAAAATTATATTACCGTGCATGTACTGCAAGAAGCCGTATGCAGATTACTATTCTCACAACGCACATTTTAACGCGTGTTGCAAAGGAAAGTATAATGGCTTTTTTGAATGTCCGTTGTGTCACAAAATGGTTGTTAAAAAAGCTTCTTATTTCCTTCATATTAAGGCCCATTTTATGCAAACGATTACGACTACGCCAGGATCATCAGAACCTCGGAAACGGTACGATTGTCGGATTTGCAAGGAGAAATTACCTTCAGAAGAAGAGCTTGTGACTCATTTAGCGGCACATATGTCTAATATTGATGATCCTGATGACGACGGATCAAGGGGGAGTACACTCGATGATTCAGCATCCGTGCAATCAGAATACTCTAATACCAAAGTTACAACTGGTCCATTGAGTTGCAAAATTTGTGATAAGAAATTTACTTACAAAAAAGCATATGACACACATGTTGCAAAACATTCACAAACGGGGATAAATATTAAAGCAGAGCCCCCAGACAAAGGTTTAGACGAGTCATCGGAGCTGTTGACCGAAGCGGCGCAACAATCGGAGTCAGAGTCCAGTCAAGATGAGGGGGATGACAATACGTGTGACATTTGCGAGAAACAGTTCTCGTACAAGCGGCTTCTGATCCAACACAAGAGAACGAAGCATCCGATGACGGCAGGAACGAAGCGAGCTAAAGTGAACCTAAAAGACTGCTCCGTGCGATGCCTGATCTGCGACATCGAGATGAAAGTCAGCGCGATAAATGCACACAATCAAACCCATATATCTGTGAACATAAAGCCGAGGAATCTGTACACTTGCATAATTTGTGATGAGAAGTTTAAGAGTTGCAGCACGTTGGCAAATCATATAAAGTTAGTGCACCGGCTCAAGCAACAGTCGTCGAAGCAGGAGACAGTTGCGCCGGACTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACCTGATCCAGAGTCACAACGGCTTTGGTGAGGTTTCCGTCCAAGAAGGCAAGCCGCTGGTCAACCTTAGCGGCTTCACTTGTCCCATTTGCAACAAGCAGATGCCTACTTTGATTTCACTTAATAGACACGTCAACTGGCATACGAATGTCGGCAACAACATTGAGAAGAAGTACGAGTGTTTTGTTTGTAACGAGATGTTCCGGTTCCAGTGCCATTATAAAATGCATATGCGAGTCCACTACCATGATACTAATTTGGATCCGAAGCTTCTAACCTGCTCCATCTGCAATCGCAAGAGCAAACACTTGCGGGCCGCGCAGGCTCACATGAATTTCCACAAGCAAACTCGCTTCAAGACAAAAGACTACGAGTGTTCTATCTGCAAAAGAGTATTCCAGTATCGAAAGGTGTACCTCTCTCACATGGCGATACATTACAAGCGAGGAGATAGCGCTAACAACACCATTGTTGGCTCGGAGCTTCCCACATCAGCAGACAAAACAATATTCGACGGGACTCATACTTGCCACATATGCAGGAAAGTCTGCGACTCTGAGACATCTCTCAAGCATCACATCATCTGGCACAACTCAAAGACTTCCTTGTACGGCAATCGGCACGGGTGTCACATATGCGACCTGCAGTTCACGAACAAGAAACGCTTGGAGCTTCACATCCGATTACATTATGAAGATGACAACGGGCCCTACAAGTGCACAATATGCGGCAAGGGTTACACCAACGAGGGCTATTTCAAACGGCACGTGAAGGGACATAACTTCGATCACCAGTCCCATAAGAAGCGTATAGAAAAATTGAGAAAGGATAAAGTGAAGTGCCCGATATGCGCACGGTACTATCCGGATCTTCTGAAGCTTATTAGACATTTGAGACGGACCCATCCGGAAAGCAAGATGATCAAGGAAGACCCGGATGCTCCACCTCCTAATTATTTCTCGTGCAAGTTGTGCGCCAAGGTGTTCCTCGACGAACGAAGGTTGCAATTCCACGAAGAAGCTCATCTCAGGAAGCCGGAGTTCTTCAAATGTAAATTCTGCGGCAAGAAAACTATTTCGCTGAGAACTCACAATGTTCATATCAAATCACATTTGGCACAGAAATATTTGGACAATCCGCTCGGTTGTCCCCATTGTGATCAAAAATTCACTAAAGGTTGGTATCTTCATCACCACCTTCGCGATGCTCACAATATTATCGAAAACTGGATCGCGGATCGCACCACACAAACGTTGAACGGCCCCTTGAAGGAGTTCCAATGCTCTGTCTGCCTCAAAATATTAGCCAGCAAGGGGAACTTCGAGAGGCACATAGATTACCATAACTCATTAAGATGCAACTACTGCTTCGATTACTTTAGCTCGTTGAGATTTTTAGAAGGTCATTTAATATTCAGTTGCGAGAAGAAAAAGCTAATAGGAGACACGGAAATTTATCCCAGAAGAATAAAGTGTCAAGTTTGCTACAAGGCATTCCATTTGCAAGTAAAATTGGATTGTCATTTACGGACGCAGCATGGAATCAAAGTGTTCAAGGAAGCCTCGGAGGGCAAAAAGGATTGTGTATGCGATTACTGTTTCAAAGTTTTCGAAAATGAGTACGCACTAAACACGCATAAGATTTATCATCGCACGATAGGTTACTACGGGTGCATTTACTGCGACCGGAAATTTAATACCATGACGATGTATCGGAAACATAAAAATCACCACTTTTCACAACTGAATGTCGACAATCCAACGAAATGTGAGCATTGCGATGAGACATTTGTAGCTTTCAGGGAGATGATATATCATATGAGGGACGTGCACGGTGACGATAAAGAGTGGATAATTTTGCCTAAGGAGTCCATTGAAGAAAAATGTCCTATTTGCCATAAAATATTCTTCAACCTCCATAGACATCTCGATTACCACGAAGAAAACAAGTGCAAGAAATGTAATGAGTACTTCTTATCTCACTTGGACTACGATAATCACTTGTGCGCCATCGACTCCGACGACGACGAAACTATGAACACCAGCGTCAGTAATGGAAATATACCTAAATACGAAGAGTGTCGATTCTGCTTCAAACCCATAACCAAAACGAGTTCCAAGCTCAAGCACGATCAAATTCACAAAAGCTCTGGTTCCATTTCTTGTAGGTTTTGCGATTTGAAGTTCAAAACGATAGACGCGTTTAATATTCACGCATTTTCACACCGAAGCAGAAAATATAACAAGAAGCCGATAAAGTGCCGAATTTGTGGAGACAAGTTCGTTAAATACGGCCCCTTCATAAAGCACATGAAGAGCGTTCATAAGAATATGAAGAAACTGCACTATCGGGCGGTGGTCAAAGAGGAGGAGTGTGTGATTTGCGGCGATTTTTTCCCGAATCTGCATAACCATTACCGTGCCCACTTGCAGAATCAGTGCCAAATGTGTCGCAAATATTTCACGTCTTTCAAGGTGTACTCCAAACACACGTGTGATACTGAAGACTCCGATCCCTCGAAAGTGTTCACCAGTGACGTGGATCTCCCGACGCTCATCAACACCTTTGTTCCCAAAGACGAGAGGGACGATGAGAAGTATTACGGATACACCGATGACGAGGAAGAGGAGCAGGAGCCTGAAATGCCAGACGAGGAAGCGGAGAGCAAGCTCCGGGAGATCAAACCGATGCTGTTCGACGAGACCAGTCAAATAACATTGGACGATGAAAGTCAAAATTCAGTGGACGAAGAAGAGAGTAACATGCACTCGATGGTCCACGCTCCGATTATATCAGATGTTCTGTCTCTTTACCATAAGAAGGAGGACATGGGAGCTGCTCAGGAGGAAGACGATGACGTGGTTAATTTGATCGATGAGGATTCAGTAGGATTTGAAGAAAATGTCGTGACAGTTATTACAATTGAAGACTAA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTMDNNLQLAEMVMECTKVKVYEGDGLPDKICSECVQKLSSAHIFKQQCERADEELRRNYIPPPGFSITPPPAANRHSSDSAFSNNTDVSNKPSPSTETIPTPISRNRKRSHESLDNASTSSQSHEIRPSTTKRVQELRKPSKTQKRQKTSYYTDSDYDYNSPSHMSVETDSDDFLEHRCKECDKRFDTSRGLINHMRMHERAAKQESMSENETTVNTTPQHSKHSEDATDVDDKLSCDRCGKTFKLKIMLKRHHDTCSSPPLKELKVSLEPIDGKVGTKIECDICNAKFKSADNLDKHLRVVHAAAPKKEKVTQPQTPQPENGKIILPCMYCKKPYADYYSHNAHFNACCKGKYNGFFECPLCHKMVVKKASYFLHIKAHFMQTITTTPGSSEPRKRYDCRICKEKLPSEEELVTHLAAHMSNIDDPDDDGSRGSTLDDSASVQSEYSNTKVTTGPLSCKICDKKFTYKKAYDTHVAKHSQTGINIKAEPPDKGLDESSELLTEAAQQSESESSQDEGDDNTCDICEKQFSYKRLLIQHKRTKHPMTAGTKRAKVNLKDCSVRCLICDIEMKVSAINAHNQTHISVNIKPRNLYTCIICDEKFKSCSTLANHIKLVHRLKQQSSKQETVAPDLADFCEVVVTKAEPLDLIQSHNGFGEVSVQEGKPLVNLSGFTCPICNKQMPTLISLNRHVNWHTNVGNNIEKKYECFVCNEMFRFQCHYKMHMRVHYHDTNLDPKLLTCSICNRKSKHLRAAQAHMNFHKQTRFKTKDYECSICKRVFQYRKVYLSHMAIHYKRGDSANNTIVGSELPTSADKTIFDGTHTCHICRKVCDSETSLKHHIIWHNSKTSLYGNRHGCHICDLQFTNKKRLELHIRLHYEDDNGPYKCTICGKGYTNEGYFKRHVKGHNFDHQSHKKRIEKLRKDKVKCPICARYYPDLLKLIRHLRRTHPESKMIKEDPDAPPPNYFSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLRTHNVHIKSHLAQKYLDNPLGCPHCDQKFTKGWYLHHHLRDAHNIIENWIADRTTQTLNGPLKEFQCSVCLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLIFSCEKKKLIGDTEIYPRRIKCQVCYKAFHLQVKLDCHLRTQHGIKVFKEASEGKKDCVCDYCFKVFENEYALNTHKIYHRTIGYYGCIYCDRKFNTMTMYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWIILPKESIEEKCPICHKIFFNLHRHLDYHEENKCKKCNEYFLSHLDYDNHLCAIDSDDDETMNTSVSNGNIPKYEECRFCFKPITKTSSKLKHDQIHKSSGSISCRFCDLKFKTIDAFNIHAFSHRSRKYNKKPIKCRICGDKFVKYGPFIKHMKSVHKNMKKLHYRAVVKEEECVICGDFFPNLHNHYRAHLQNQCQMCRKYFTSFKVYSKHTCDTEDSDPSKVFTSDVDLPTLINTFVPKDERDDEKYYGYTDDEEEEQEPEMPDEEAESKLREIKPMLFDETSQITLDDESQNSVDEEESNMHSMVHAPIISDVLSLYHKKEDMGAAQEEDDDVVNLIDEDSVGFEENVVTVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00970596; iTF_00971547;
90% Identity
iTF_00795889;
80% Identity
-