Basic Information

Insect: Megathymus violae
Gene Symbol: -
Assembly: GCA_003671415.1
Location: PDGT01000077.1:1606972-1617556[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 2.4e-06 0.00022 22.1 2.2 1 23 198 220 198 220 0.98

2 27 0.00048 0.044 14.9 0.8 2 20 250 268 249 270 0.93

3 27 0.00018 0.016 16.2 0.1 2 23 295 317 294 317 0.96

4 27 0.0038 0.35 12.0 1.2 1 23 372 394 372 394 0.97

5 27 0.035 3.2 9.0 0.1 1 23 412 434 412 434 0.95

6 27 3.5e-05 0.0032 18.4 0.4 2 23 472 493 471 493 0.96

7 27 0.00035 0.032 15.3 2.5 2 23 536 558 535 558 0.97

8 27 0.00073 0.066 14.3 1.1 1 23 608 631 608 631 0.95

9 27 0.0037 0.34 12.1 0.1 1 23 687 709 687 709 0.97

10 27 0.0028 0.25 12.4 7.4 1 23 720 742 720 742 0.99

11 27 0.076 6.9 7.9 1.8 2 23 754 775 753 775 0.96

12 27 0.0045 0.41 11.8 0.7 1 23 785 807 785 807 0.98

13 27 0.00072 0.066 14.3 5.6 1 23 836 858 836 858 0.96

14 27 0.002 0.18 12.9 2.2 3 23 871 891 870 891 0.98

15 27 8.2e-06 0.00075 20.4 0.9 1 23 899 921 899 921 0.98

16 27 0.0027 0.24 12.5 0.1 2 23 941 963 940 963 0.97

17 27 0.11 9.6 7.5 3.2 1 23 1010 1032 1010 1032 0.97

18 27 0.002 0.18 12.9 4.1 2 23 1043 1065 1042 1065 0.95

19 27 0.0022 0.2 12.8 0.3 1 23 1087 1109 1087 1109 0.97

20 27 8.7 7.9e+02 1.5 3.9 2 23 1152 1174 1151 1174 0.94

21 27 0.0018 0.17 13.0 1.7 2 23 1190 1211 1189 1211 0.94

22 27 0.9 82 4.6 3.8 5 23 1221 1239 1218 1239 0.94

23 27 0.0014 0.13 13.3 1.1 2 23 1250 1272 1249 1272 0.95

24 27 0.4 36 5.7 2.6 2 23 1289 1307 1289 1307 0.89

25 27 0.12 11 7.3 0.5 2 23 1382 1403 1381 1403 0.93

26 27 0.00034 0.031 15.3 0.4 2 23 1414 1436 1413 1436 0.97

27 27 3.2 2.9e+02 2.8 6.1 3 21 1475 1493 1473 1494 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	2.4e-06	0.00022	22.1	2.2	1	23	198	220	198	220	0.98
2	27	0.00048	0.044	14.9	0.8	2	20	250	268	249	270	0.93
3	27	0.00018	0.016	16.2	0.1	2	23	295	317	294	317	0.96
4	27	0.0038	0.35	12.0	1.2	1	23	372	394	372	394	0.97
5	27	0.035	3.2	9.0	0.1	1	23	412	434	412	434	0.95
6	27	3.5e-05	0.0032	18.4	0.4	2	23	472	493	471	493	0.96
7	27	0.00035	0.032	15.3	2.5	2	23	536	558	535	558	0.97
8	27	0.00073	0.066	14.3	1.1	1	23	608	631	608	631	0.95
9	27	0.0037	0.34	12.1	0.1	1	23	687	709	687	709	0.97
10	27	0.0028	0.25	12.4	7.4	1	23	720	742	720	742	0.99
11	27	0.076	6.9	7.9	1.8	2	23	754	775	753	775	0.96
12	27	0.0045	0.41	11.8	0.7	1	23	785	807	785	807	0.98
13	27	0.00072	0.066	14.3	5.6	1	23	836	858	836	858	0.96
14	27	0.002	0.18	12.9	2.2	3	23	871	891	870	891	0.98
15	27	8.2e-06	0.00075	20.4	0.9	1	23	899	921	899	921	0.98
16	27	0.0027	0.24	12.5	0.1	2	23	941	963	940	963	0.97
17	27	0.11	9.6	7.5	3.2	1	23	1010	1032	1010	1032	0.97
18	27	0.002	0.18	12.9	4.1	2	23	1043	1065	1042	1065	0.95
19	27	0.0022	0.2	12.8	0.3	1	23	1087	1109	1087	1109	0.97
20	27	8.7	7.9e+02	1.5	3.9	2	23	1152	1174	1151	1174	0.94
21	27	0.0018	0.17	13.0	1.7	2	23	1190	1211	1189	1211	0.94
22	27	0.9	82	4.6	3.8	5	23	1221	1239	1218	1239	0.94
23	27	0.0014	0.13	13.3	1.1	2	23	1250	1272	1249	1272	0.95
24	27	0.4	36	5.7	2.6	2	23	1289	1307	1289	1307	0.89
25	27	0.12	11	7.3	0.5	2	23	1382	1403	1381	1403	0.93
26	27	0.00034	0.031	15.3	0.4	2	23	1414	1436	1413	1436	0.97
27	27	3.2	2.9e+02	2.8	6.1	3	21	1475	1493	1473	1494	0.92

Sequence Information

Coding Sequence: ATGGCACTCAAGCTGGGAAAATGTAGGCTCTGCCTCAAGCTCGGCGACTTCTATTCCATCTTCACGGTGGACAACAATTTGCAGCTCGCCGAAATGGTTATGGAATGCACCAAAGTGAAAGTTTATGAAGGCGATGGTCTCCCAGACAAAATCTGCTCAGAATGTATCCAAAAGCTCAGCAGTGCTCATATTTTCAAACAGCAATGCGAAAGATCGGACGAAGAGCTTCGTCGTAATTATGTTCCGCCCCCAGGATTCAGTGTTACACCCCCACCGGCGGCAAACAGACAAAGCAGCGATTCGGCTTTTTCAAACAACACAGATGTATCTAATAAGCCTTCACCGTCGACTGAAATAGTACCCACACCGCTCAGTCGTAATCGAAAGAGAAGCCGCGAGAGTTTAGACAATGCTTCAATAAGTAGCCAATCTCACGACAACCGACCCGGCCCTACTAAACGCGTTCAAGAACTCCGAAAAATTCCGAAGTCACTAAAGCGATCTAAGACGAATTACTATACCGATTCTGATTATGAATATAATAGTCCATCCCAATTCTCTGTTGAAACTGACTCCGATGACTTCCTAGAGCACAGGTGTAAGGAATGTGACAAACGTTTTGATAGCAGCAGAGGTTTAATAAATCACATGCGGATACATGAAAGAGCATCCAAGCAGGAAAACTTGAGCGAAAATGAAACTTGTACGAAAAATTCAGAAGATGCAACAGACGTTGACGACAAATTGAGTTGCGACAAATGTGGGAAAACATTCAAACTAAAGATAATGTTAAAACGGCACCATGATATTTGTAGTACCCCGCCGTTAAAGGAACTCAAAGTGTCCCTTGAACCGATCGACGGGAAGATCGGTTCGAAGATAGAGTGTGAAATATGCAACGCGAAATTTAAGTCTATAGATAACTTAGATAAGCATTTGCGTGTGGTTCACGCTGCCGCTCCTAAAAAGGAAAAGGGTTCTCAGCCCCAGACACCACAACCGGAGAACGGTAAAGTAGTTTTACCATGCATGTATTGCAAAAAGCTGTACACAGATTACTATTCACACAACGCTCATTTTAATGCATGTTGCAAAGAGAAGTACACTGGATATTTTGAATGTCCGTTATGTCACAAAAGGGTGGTTAAAAAAGCATCCTATTTCCTACACATTAAAGCACATTTCATGCAAACTATTTCAACAACACCAGGGTCATCAGAATCTCGTAAACGTTACGACTGTCGGATTTGCAAAAAGAAATTACCTTCTGAAGAAGAACTGGTCACTCACTTGGCAGCACATATGTCCAATTTGGATGATCCTGACGACGAAGGATCGAGGGCGAGTACACTAGATGATTCAGCATCCATCCAGTCGGAATATAGCAACTCGAAAGTTACAACTGGTCCGTTAAATTGTCCTATTTGTGACAAGAAATTTACTTACAAGAAGGCTTTAGACTCACATATTGCAAAACATTCACAAACAGAAATTAATATTAAACAAGAGCCACCGGACAAAAGCCTCGATGAATCAACGGAACTGTTGACTGAAGCGGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATGCGACATTTGCGAGAAACAGTTTTCGTATAAGCGACTTTTGTTACAGCACAAGAGAACGAAACATCCTATGACAGCTGGGACGAAACGGGCTAAAGTCAATCTTAAAGACTGCTCCGTTCGATGCCTCATCTGCGACATCGAGATGAAAGTCAGCGCAATTAACGAACACAATCAAACTCATATATCGGTGAACATAAAGCCGAGGAATCTCTACACTTGCATAATTTGCGATGAGAAGTTCAAAAGTTGCAGCTCACTAGCGAATCATATAAAGTTAGTGCATCGGCTTAAACAGCAGTTGTCGAAGCAGGAGACGGCCGCGCCGGATTTGGCGGATTTTTGTGAAGTCGTTGTGACAAAGGCGGAACCCCTGGACGTGATCCAGAGTCACAACGGCTTTGGTGAGGTTTCCGCCGGAGGGGGAAAACCGCTGGTCAACCTCAGCGGCTTCACCTGTCCCATTTGCAACAAGCAGATGCCTACTTTGATTTCGCTAAATAGACATGTCAACTGGCATACGAATGTCGGCAACAATATCGAGAAAAAATACGAGTGTTTTGTTTGTAAAGAGACGTTCCGGTTCCAGTGCCACTATAAAATGCATATGCGGGTTCACTACCACGATCCGAATTTGGATCCTAAGTTTCTAACCTGCTCCATCTGTAACCGTAAAAGCAAACACCTACGAGCCGCGCAAGCTCACATGAACTTCCACAAGCAAACACGCTTTAAGACGAAAGACTACGAGTGTTCCATCTGCAAGAGAGTCTTTCAGTACCGGAAGGTGTACCTCTCCCACATGGCGATACATTATAAACGTGGCGATAGCGCCAATAACACCATTGTAGGCTCCGAACTTCCCACTACAGCAGACAGAACAATATTCGACGGGACTCATACTTGCCATATATGCGGGAAAGTCTGCGACTCTGAAACGTCTCTCAAGCATCACATCATTTGGCACAGCTCCAAGACCTCCCTGTACGGAAATCGGCATGGGTGCCATATATGTGATTTGCAGTTCACGAACAAGAGACGATTGGAGCTTCACATTCGATTCCATTATGAGGATGAGAATGGTCCTTACAAATGTACAATATGCGGTAAGGGCTACACGGACGAGGAGTATTACAAACGACATCTGAAGGGACACAACTTTGATAATCAGTCTCATAAGAAGCGTATAGAAAAACTGAGAAAAGATAAAGTAAAGTGTCCAATATGCGCACGATATTATCCAGATCTCGTAAAGCTTATTAGACACTTGAGAAGGACACATCCGCAGAGCAAGATGATCAAGGAAGATCCGGATGCTCCTCCGCCTAATTACTTTTCGTGCAAGTTGTGCGCTAAAGTGTTCCTTGATGAACGACGTTTGCAATTCCACGAAGAAGCTCATCTGAGGAAACCGGAGTTCTTTAAATGTAAATTCTGCGGCAAGAAAACGATTTCCCTGAGAAATCACAATGTGCATATCAAGGGACACTTGGCGCAGAAGTTTTTGGATAATCCACTCACTTGTCCCCATTGTGATGAGAAATTCACTAAAGGCTACGATCTGCATCATCACCTTCGTGATGTTCATAATATTAACGAAACTTGGATCGCAGAGCGCACCACACAAACTTTAAATGGCCCCTTAAAGGAATTTCAGTGCTCTGTCTGTCTCAAAATTTTGGCCAGCAAAGGGAACTTTGAGAGGCACATAGATTACCATAACTCATTGAGATGCAACTACTGCTTTGATTACTTTAGCTCCTTGCGATTTTTAGAAGGTCATTTAACGTTCAGTTGCGAGAAGAAAAAGCTTATAGGAGACACAGAAATTTATCCCCGAAGGATAAAGTGTCAAGTGTGTTATAAGGCCTTTCACTTGCAAGTGAAATTGGATTGTCATTTACGAACGCAGCACGGAATCAAAGTGTTCAAGGAAGCCTCAGAGGGTAAAAAGGATTGTGTATGCGATTACTGTTTTAAAGTTTTTGAAAATGAATATGCTTTAAACACGCATAAGATTTATCATCGTACAGTAGGCTACTATGGGTGCATTTACTGCGACCGGAAATTTAACACTATGACCATGTATCGGAAACATAAAAATCATCACTTTTCACAACTCAACGTCGACAATCCGACAAGATGCGAGCATTGCGATGAAACCTTCGTGTCTTTCAGGGAGATGATATATCATATGAGGGACGTGCACGGTGATGACAAGGAATGGATAATTTTGCCCAAGGAGTCTATTGAAGAAAAATGTCCTATTTGCAACAAAATATTTTTCAACCTCCATAGACATCTCGACTACCACGAAGAAAACAAATGTAAAAAATGCAACGAGTACTTCTTATCTCACATAGACTACGATAATCACCTGTGCGCTATTGATTCTGACGACGAAGACGCCGGGAATACCAGTACCGACAATGGCAACATGCCTAAGTATGAAGAATGTCGATTTTGCTTCAAACCCATAACCAAAACGAGTTCCAAGCTCAAGCACGATCAAATTCACAAAAGCTCCGGTTCAATTTCCTGTAGGTTTTGCGATTTGAAATTCAAAACCATTGATGCGTTTAATATTCACGCGTTTTCGCACCGAAGTAGAAAATATAACAAGAAGCCGATAAAATGTAGAGATTGTGGAGAGAAATTTGTTAAATACGGACCCTTCATGAAGCACATGAGGTCGGTTCATAAGAATTTGAAGAAGCTACACTATCGTGCGGTGGTCAAAGAAGAGGCTTGTGTGATATGCGGCGACTATTTCCCGAATCTGCACAACCATTACCGTGCGCACTTGCAGAATCATTGCCAGCTATGTCACAAATACTTCACGTCGTTCAAGTTGTTCTCCAAACACACGTGCAATACTGAAGACTCTGATCTCTCGAAGGTATTCACCAGTGATGTAGACTTAACCGCGCTCATCAACTCCTACGTTCCCAAGGACGAGAAAGACGATGAGAAATATTACGGGTACACGGATGACGAGGAAGAAGAAGCCGAACCTGAAGCACCAGATGAAGAGCCAGAGATTAAGCTCACGGAAAGTAAACCGATGCTGTTCGACGAGAACAGTCAAATAACGTTTGATGATGAAAGTCAAAATTCGGTCGACGAAGAAGAAAGTAACATGCACTCGATGGTCCACACCCCTATAATATCCGACGTTCTGTCTCTTTATCAGAAGAAGGAAGAAGACATAGGGACCGCCGAGCCGGAAGCCGATGATGACGTGGTTAATTTGATAGACGAAGATTCAGTGGGATTTGAAGAAAATATTCTAACCGTTATAACAATTGAGGACTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNNLQLAEMVMECTKVKVYEGDGLPDKICSECIQKLSSAHIFKQQCERSDEELRRNYVPPPGFSVTPPPAANRQSSDSAFSNNTDVSNKPSPSTEIVPTPLSRNRKRSRESLDNASISSQSHDNRPGPTKRVQELRKIPKSLKRSKTNYYTDSDYEYNSPSQFSVETDSDDFLEHRCKECDKRFDSSRGLINHMRIHERASKQENLSENETCTKNSEDATDVDDKLSCDKCGKTFKLKIMLKRHHDICSTPPLKELKVSLEPIDGKIGSKIECEICNAKFKSIDNLDKHLRVVHAAAPKKEKGSQPQTPQPENGKVVLPCMYCKKLYTDYYSHNAHFNACCKEKYTGYFECPLCHKRVVKKASYFLHIKAHFMQTISTTPGSSESRKRYDCRICKKKLPSEEELVTHLAAHMSNLDDPDDEGSRASTLDDSASIQSEYSNSKVTTGPLNCPICDKKFTYKKALDSHIAKHSQTEINIKQEPPDKSLDESTELLTEAAXXXXXXXXXXXXXXXTCDICEKQFSYKRLLLQHKRTKHPMTAGTKRAKVNLKDCSVRCLICDIEMKVSAINEHNQTHISVNIKPRNLYTCIICDEKFKSCSSLANHIKLVHRLKQQLSKQETAAPDLADFCEVVVTKAEPLDVIQSHNGFGEVSAGGGKPLVNLSGFTCPICNKQMPTLISLNRHVNWHTNVGNNIEKKYECFVCKETFRFQCHYKMHMRVHYHDPNLDPKFLTCSICNRKSKHLRAAQAHMNFHKQTRFKTKDYECSICKRVFQYRKVYLSHMAIHYKRGDSANNTIVGSELPTTADRTIFDGTHTCHICGKVCDSETSLKHHIIWHSSKTSLYGNRHGCHICDLQFTNKRRLELHIRFHYEDENGPYKCTICGKGYTDEEYYKRHLKGHNFDNQSHKKRIEKLRKDKVKCPICARYYPDLVKLIRHLRRTHPQSKMIKEDPDAPPPNYFSCKLCAKVFLDERRLQFHEEAHLRKPEFFKCKFCGKKTISLRNHNVHIKGHLAQKFLDNPLTCPHCDEKFTKGYDLHHHLRDVHNINETWIAERTTQTLNGPLKEFQCSVCLKILASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLTFSCEKKKLIGDTEIYPRRIKCQVCYKAFHLQVKLDCHLRTQHGIKVFKEASEGKKDCVCDYCFKVFENEYALNTHKIYHRTVGYYGCIYCDRKFNTMTMYRKHKNHHFSQLNVDNPTRCEHCDETFVSFREMIYHMRDVHGDDKEWIILPKESIEEKCPICNKIFFNLHRHLDYHEENKCKKCNEYFLSHIDYDNHLCAIDSDDEDAGNTSTDNGNMPKYEECRFCFKPITKTSSKLKHDQIHKSSGSISCRFCDLKFKTIDAFNIHAFSHRSRKYNKKPIKCRDCGEKFVKYGPFMKHMRSVHKNLKKLHYRAVVKEEACVICGDYFPNLHNHYRAHLQNHCQLCHKYFTSFKLFSKHTCNTEDSDLSKVFTSDVDLTALINSYVPKDEKDDEKYYGYTDDEEEEAEPEAPDEEPEIKLTESKPMLFDENSQITFDDESQNSVDEEESNMHSMVHTPIISDVLSLYQKKEEDIGTAEPEADDDVVNLIDEDSVGFEENILTVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01082671;
90% Identity: iTF_00970596;
80% Identity: -