Basic Information

Insect: Ochlodes sylvanus
Gene Symbol: -
Assembly: GCA_905404295.1
Location: FR990133.1:1441433-1447453[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0076 0.65 11.1 1.4 3 23 34 54 33 54 0.99

2 19 0.0002 0.017 16.1 2.5 1 23 91 114 91 114 0.97

3 19 0.0013 0.11 13.5 0.7 1 23 116 138 116 138 0.97

4 19 4.9 4.2e+02 2.2 0.7 1 23 146 168 146 168 0.95

5 19 0.033 2.9 9.1 0.1 1 23 173 195 173 195 0.98

6 19 0.047 4.1 8.6 3.1 1 19 252 270 252 274 0.90

7 19 9.5e-05 0.0082 17.1 0.0 1 20 280 299 280 300 0.96

8 19 0.058 5 8.3 0.1 1 23 315 338 315 338 0.96

9 19 0.00037 0.032 15.2 0.6 2 23 345 368 344 368 0.94

10 19 0.43 37 5.6 2.4 3 23 376 396 375 396 0.97

11 19 0.15 13 7.0 0.7 1 23 401 423 401 423 0.96

12 19 1.3e-05 0.0011 19.8 2.1 3 23 431 451 429 451 0.96

13 19 6.9e-05 0.006 17.5 2.7 1 23 457 479 457 479 0.98

14 19 3e-05 0.0026 18.6 1.3 1 23 485 508 485 509 0.97

15 19 0.001 0.086 13.9 3.0 1 23 705 728 705 729 0.93

16 19 3.3e-05 0.0028 18.5 1.9 1 23 799 822 799 822 0.97

17 19 9.5e-05 0.0082 17.1 1.8 1 23 881 904 881 904 0.97

18 19 1.1e-05 0.00097 20.0 2.5 1 23 972 995 972 995 0.98

19 19 0.048 4.1 8.6 5.3 1 23 1057 1080 1057 1080 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0076	0.65	11.1	1.4	3	23	34	54	33	54	0.99
2	19	0.0002	0.017	16.1	2.5	1	23	91	114	91	114	0.97
3	19	0.0013	0.11	13.5	0.7	1	23	116	138	116	138	0.97
4	19	4.9	4.2e+02	2.2	0.7	1	23	146	168	146	168	0.95
5	19	0.033	2.9	9.1	0.1	1	23	173	195	173	195	0.98
6	19	0.047	4.1	8.6	3.1	1	19	252	270	252	274	0.90
7	19	9.5e-05	0.0082	17.1	0.0	1	20	280	299	280	300	0.96
8	19	0.058	5	8.3	0.1	1	23	315	338	315	338	0.96
9	19	0.00037	0.032	15.2	0.6	2	23	345	368	344	368	0.94
10	19	0.43	37	5.6	2.4	3	23	376	396	375	396	0.97
11	19	0.15	13	7.0	0.7	1	23	401	423	401	423	0.96
12	19	1.3e-05	0.0011	19.8	2.1	3	23	431	451	429	451	0.96
13	19	6.9e-05	0.006	17.5	2.7	1	23	457	479	457	479	0.98
14	19	3e-05	0.0026	18.6	1.3	1	23	485	508	485	509	0.97
15	19	0.001	0.086	13.9	3.0	1	23	705	728	705	729	0.93
16	19	3.3e-05	0.0028	18.5	1.9	1	23	799	822	799	822	0.97
17	19	9.5e-05	0.0082	17.1	1.8	1	23	881	904	881	904	0.97
18	19	1.1e-05	0.00097	20.0	2.5	1	23	972	995	972	995	0.98
19	19	0.048	4.1	8.6	5.3	1	23	1057	1080	1057	1080	0.96

Sequence Information

Coding Sequence: ATGGCTTCACTCACCAGTCTACACCAAAACATACAGCAAAGCTCAATAGATTGTAACGGTCCGAAACAAACCACAATCGATTTGGTTGGCGGCATACTCTGCAAAATATGCCGGCTGACGTTCGCAACGAAACAGAGCTACGACAGCCACTACCGTAGCCACGGCACTTCAACGGAGATCATTTACACTTGCAACATATGTTATAAGGAGATAGCCGGCTACCCAAGCTTCCGTGGTCATTGTTACACAAGTCATGTTATTAAGGAAAGATTCCAGTGTGAACATTGCTTGAAACAATTTTCAAAAATCAGCAACCTCAAAGACCATGTTAACAGAATACATAAATTCAAATGCCCTACGTGCAGAAAAGAGTTTCCCAGTAAGAAAGAAATGCTACTACACAAGATCATTCATAATAACATGGACCAACCTCCGTATAACTGCAATACTTGTAAAATTGAAATCGACACAGCCGATGAGTGCAAAGAGCACATCGAGAAGCACTTAAAATTTCTATACTCCTGTCCAATTTGCAACGATAACATATCGGACAGGGATAATGCCGCGGAACATATGAAGAAACATTTCGGCAACGTACTTAGCGAAGACCCAAATAACGAGACTCCTAAATCATCAGAAGACACATCCGAAGAATTCAGCGGTATAATGTGCCAGTTCTGTTCCTTAATTCTCGGGGACAGAGTAAAATTTGATGCTCATTTCTCTTGCAAACATGGTGATGAGGACATAGTATACATGTGCGTGGAGTGCGGGAAGAGCTTTGAAAAATATTCCGTATTCAAGAATCATTGCAACGATCATACTTTGAGGAATAGATACAAGTGCGAGATTTGCAAGAAGGCGTTCCCGCGGCTGTCGATGCTGGCGGCGCACACGGCGGCGTGCCAGGTGGCGGGCGCGGGCGCGGCGCGCGGGAAGGTGTTCGCGTGCCCGTCGTGCAGCCGCCGGTTCGCCAGCATGGGCCGCTGGCGGGAGCACCTCAAGGTCGCGCACGACATACTCGACCATCTGCCCTGTCCGCACGACCGCTGCGATCGCACTTTTGACACTCCAAAACAGCTGATTCTTCATCAACAATCGCACGAAATTACCAATCAGAACTTTTGCAGTCAATGCAGGCTTGTCTTCTCGAATGCAACATCTTGCGAGCGTCATTTAGATATGCACAAAAAAAAGATATTCTTCTGCCCCATATGCAAGCGAAATGCGAAAGATAAAAAAGTTATAATGAATCACATATCGAAACACTTCGACGTCATTTCCCATCTCTGTCGGATTTGTGGCAAAATTTTTAGTTCTAAAAAAAGTTTGATTGAACACTTAAAGACGCACAAGAAGGTAAAAAGTTACTCTTGCACGCACTGCAATAAGAGCTTTTTGAAGCCATCCCAGTTGGAACAGCATGTGAACACGCATACTGGCGTGAAGCCTTACAAATGTCCGGTTTGTGTAAAATCGTTTTCAAACTACCCGAATTGGGTCAAACACGTACGCAGAATGCACCATGAAGAGAGTATTTACATCAAAAATCCAATCTCTACAGATGCAGATAACATTGATAAGGATGATTCCACGGTGGAAACAGCATTTAACGAAAATGAATTCATAAAATCTAATCATCTTTTCAATAATGATATTTATACTGCAAGTAAAAAAGATAACAATAATTATCAAATTTCGAATACAAACGAACCAATTTCTAATATGAATATCGAGCGAAATATCAATGACGTTCACCACTTAAAGAGCATTGATATAAAAAAAATAATTAATGATGACGTAGTGGCTGTAAATAACATTGGATCTGCAATGGAAATAGTAGTCGATGAAAATTATGAAGTAGCACAAACTGATGTTACAAAAATGTCACATGAAAACTTTTTTAACATTGTTGAAGTAAACCATATAAATAGTATTAACATTGTCAATCAGATCGTTGATAACGCGGTGGGAATTGGGAATGAAGCATCTCTAATATTAACAGCAACAGATAAAGAATATGAGATAGCTCAAGATATTCAAAAGGAAGATGCTGAACAAAGTCCAATTGCAGATGAACAAATTTCAAACACACATGCTTACGACAAGCCTCACAAATGTCCTATATGTGAAAAATCTTTTGCAAAATATTCCTACATGAGCAAACATGTAGGCAGAGTACACCACATTAGGAGTATTGACATAAAAAATCTCATTATAGATCATAAAGACAGTGCTGATGATGAGGCATCTGCCATGGAGACAATGGTGAGTGAAGAAAATGAAACATCTACAGATGGAAAAGGTGATAGTGATGAACAAGTTTCCAATACTGAAAAACTCAAAACTCAGATAAGCTCAAATATAGAATATCATCTTGATGGCGCCAAGCCCCATAAATGTCCTATTTGTGACAAGACTTTTGCAAAGTATCCCTACATGACTAAACATGTTCGTAAAGTACATAACAAAAAGAGCATTGACATTAAGGGTTCCATTACGGACTACAAAATGACTGTTGCTAATGATGTTTCTGCAATGGAAACAGCAGTTGATGAAGAAAATGACACGTCTAGAGATATTTCAAAAGATATTAATGATCAGATAACAAATTTAGAAAATCAAAATATAAATAAACCTCACAAATGTCCTATATGCGAAAAATCATTTGCAAAATATCCATATATGACCAAACATGTCCGTAAAGTTCACAATAAAAAGATTATTGATATTAAAAACGCTGTTAATGAACACAAGGAGGGTGTCGATGGGGATGTCTCTGCAATGGAAACATCAATTGATGGAGAATGTGACATATCTATAGATAACATAAAAGATGATAATGTTGTCCAATTTCTGAATACAGATAAACTTTTAAATGTAGAACATCTCACGAATATAGAATCCAAACCTTATAAGTGTCCTACATGTGACAAATCATTTGCAAAACATTCATATGTGAGTAAACATGTCCGTACAGTACACAACAAGAAGAGTATTGATATTAAAAATCTGATCAGCGATTTCAAAGATAGTGTTGAGGACGACGGATCCGCAATGGAAACAGTGGGCGATGAAGATAATGATATATTTACAGATAATTCAAAAGATGACAATGATGATCGATTTTCTAACACAGATAATCAAATGGATGCCAGCTACAAGCCTTATAAATGCCCTATATGTGAAAAATCATTTGCAAAAGACTGCTATTGTAGGAAGCATGTGCGTAGAGTACACTATAAGAAGGGTATGGACATCAAGAGCCCGATCTTTGATCCTACCAAGGGTTCCGTTATAGGAACATTATTAGAAAATGAAAATCAATTAGTTGAATCACAAGATTACTTGAATAATGACATTTCTAATATACACTCAATTGCTAACATTGTTAATGAGACCGAAACTACCGATTGTTTTAATGATATTGATGATGCTAACGCTAGTATGGACTTTGCAAACGTTAAGTTGGAAAACTACATTTTTAATGTACAAAGAGATAGCCCGATGGATATTGTTCCTTCTTTGCCCGATGGAAAATATTTGCTCAATAGTAATAACGACGGAAACGTTACTATTAATAAAGATTTGTTCAAGAATAATAGCGAAAATTCTTCGATTAGTAAAGATATAATGTACGAGAAAGGAAATGCACCGATTGGAATAGAACTTGTCAATGAAAATGGCGAGGCTATTGCTCTCGTGGAGACAGATTTGTTCAATGCCAATAGTAAGGAAAGTGCTACAGTTGGAAAAGATTTGTTTAGTGGTGGTAGTAACGAACAGAATGATAATCCCATTGACATTCTTGAATACATCGCGGAAATGCCTGAGAATAACTCATTATTTGTTCCTGTGATCAGCCAAGAGGCGCTCGCCGGCAGCGCGCCGCCGCCGGCCGAGGCGGTCTCGTTCCCGTGCGAGTACGGGCCCGAGTTCAGCGCCGGCTTCGACGCCGCCAGCACCGCCGGGTTCATCGACCTCGACGACCACATGCTGCCCCACATCGACCCGCTGCTCACCATCAACAACCAGACGTGCGTACAAACCGAATACCAAAACTACGACTACAACGTGATCGAGGCGGCGGACCTGCTCGCGCTGGGCAACGAGGCGTGCGCCAAGTACGCGCCCAGCGAGCCGCCCTACCAGTACGACGTGGCGGTCGCGGCCGGCTACGAGCCCGGCTGGGACCCGCCCATCATCACCAAGCTCTGCGACCAATACGCCTACGGCTACGGCGAGATGCCCGAGGCCAGTAGGGTACCTATAATGAACACGGATATATTTTGA
Protein Sequence: MASLTSLHQNIQQSSIDCNGPKQTTIDLVGGILCKICRLTFATKQSYDSHYRSHGTSTEIIYTCNICYKEIAGYPSFRGHCYTSHVIKERFQCEHCLKQFSKISNLKDHVNRIHKFKCPTCRKEFPSKKEMLLHKIIHNNMDQPPYNCNTCKIEIDTADECKEHIEKHLKFLYSCPICNDNISDRDNAAEHMKKHFGNVLSEDPNNETPKSSEDTSEEFSGIMCQFCSLILGDRVKFDAHFSCKHGDEDIVYMCVECGKSFEKYSVFKNHCNDHTLRNRYKCEICKKAFPRLSMLAAHTAACQVAGAGAARGKVFACPSCSRRFASMGRWREHLKVAHDILDHLPCPHDRCDRTFDTPKQLILHQQSHEITNQNFCSQCRLVFSNATSCERHLDMHKKKIFFCPICKRNAKDKKVIMNHISKHFDVISHLCRICGKIFSSKKSLIEHLKTHKKVKSYSCTHCNKSFLKPSQLEQHVNTHTGVKPYKCPVCVKSFSNYPNWVKHVRRMHHEESIYIKNPISTDADNIDKDDSTVETAFNENEFIKSNHLFNNDIYTASKKDNNNYQISNTNEPISNMNIERNINDVHHLKSIDIKKIINDDVVAVNNIGSAMEIVVDENYEVAQTDVTKMSHENFFNIVEVNHINSINIVNQIVDNAVGIGNEASLILTATDKEYEIAQDIQKEDAEQSPIADEQISNTHAYDKPHKCPICEKSFAKYSYMSKHVGRVHHIRSIDIKNLIIDHKDSADDEASAMETMVSEENETSTDGKGDSDEQVSNTEKLKTQISSNIEYHLDGAKPHKCPICDKTFAKYPYMTKHVRKVHNKKSIDIKGSITDYKMTVANDVSAMETAVDEENDTSRDISKDINDQITNLENQNINKPHKCPICEKSFAKYPYMTKHVRKVHNKKIIDIKNAVNEHKEGVDGDVSAMETSIDGECDISIDNIKDDNVVQFLNTDKLLNVEHLTNIESKPYKCPTCDKSFAKHSYVSKHVRTVHNKKSIDIKNLISDFKDSVEDDGSAMETVGDEDNDIFTDNSKDDNDDRFSNTDNQMDASYKPYKCPICEKSFAKDCYCRKHVRRVHYKKGMDIKSPIFDPTKGSVIGTLLENENQLVESQDYLNNDISNIHSIANIVNETETTDCFNDIDDANASMDFANVKLENYIFNVQRDSPMDIVPSLPDGKYLLNSNNDGNVTINKDLFKNNSENSSISKDIMYEKGNAPIGIELVNENGEAIALVETDLFNANSKESATVGKDLFSGGSNEQNDNPIDILEYIAEMPENNSLFVPVISQEALAGSAPPPAEAVSFPCEYGPEFSAGFDAASTAGFIDLDDHMLPHIDPLLTINNQTCVQTEYQNYDYNVIEAADLLALGNEACAKYAPSEPPYQYDVAVAAGYEPGWDPPIITKLCDQYAYGYGEMPEASRVPIMNTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01438244; iTF_00887602; iTF_01439232;
90% Identity: -
80% Identity: -