Basic Information

Insect: Lerema accius
Gene Symbol: -
Assembly: None
Location: scaffold1748:30753-36118[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0061 0.37 11.3 1.2 3 23 34 54 33 54 0.99

2 18 0.00019 0.012 16.0 2.6 1 23 91 114 91 114 0.97

3 18 0.00051 0.031 14.7 1.2 1 23 116 138 116 138 0.97

4 18 0.0076 0.47 11.0 0.2 1 23 173 195 173 195 0.98

5 18 0.043 2.7 8.6 3.1 1 19 252 270 252 274 0.90

6 18 8.7e-05 0.0054 17.1 0.0 1 20 280 299 280 300 0.96

7 18 0.01 0.63 10.6 0.2 1 23 314 337 314 337 0.97

8 18 0.00033 0.021 15.2 0.6 2 23 344 367 343 367 0.94

9 18 0.65 40 4.9 1.1 3 23 375 395 374 395 0.96

10 18 1.8 1.1e+02 3.5 0.6 1 23 400 422 400 422 0.89

11 18 0.00048 0.03 14.7 2.4 3 23 430 450 428 450 0.96

12 18 2.4e-06 0.00015 22.0 2.8 1 23 456 478 456 478 0.98

13 18 2.7e-05 0.0017 18.6 1.3 1 23 484 507 484 508 0.97

14 18 0.0011 0.067 13.6 3.1 1 23 706 729 706 730 0.93

15 18 5.5e-05 0.0034 17.7 3.4 1 23 800 823 800 823 0.97

16 18 0.00015 0.0091 16.4 3.8 1 23 880 903 880 903 0.97

17 18 6.9e-06 0.00043 20.5 4.9 1 23 971 994 971 994 0.98

18 18 0.0016 0.096 13.1 2.5 1 23 1055 1078 1055 1078 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0061	0.37	11.3	1.2	3	23	34	54	33	54	0.99
2	18	0.00019	0.012	16.0	2.6	1	23	91	114	91	114	0.97
3	18	0.00051	0.031	14.7	1.2	1	23	116	138	116	138	0.97
4	18	0.0076	0.47	11.0	0.2	1	23	173	195	173	195	0.98
5	18	0.043	2.7	8.6	3.1	1	19	252	270	252	274	0.90
6	18	8.7e-05	0.0054	17.1	0.0	1	20	280	299	280	300	0.96
7	18	0.01	0.63	10.6	0.2	1	23	314	337	314	337	0.97
8	18	0.00033	0.021	15.2	0.6	2	23	344	367	343	367	0.94
9	18	0.65	40	4.9	1.1	3	23	375	395	374	395	0.96
10	18	1.8	1.1e+02	3.5	0.6	1	23	400	422	400	422	0.89
11	18	0.00048	0.03	14.7	2.4	3	23	430	450	428	450	0.96
12	18	2.4e-06	0.00015	22.0	2.8	1	23	456	478	456	478	0.98
13	18	2.7e-05	0.0017	18.6	1.3	1	23	484	507	484	508	0.97
14	18	0.0011	0.067	13.6	3.1	1	23	706	729	706	730	0.93
15	18	5.5e-05	0.0034	17.7	3.4	1	23	800	823	800	823	0.97
16	18	0.00015	0.0091	16.4	3.8	1	23	880	903	880	903	0.97
17	18	6.9e-06	0.00043	20.5	4.9	1	23	971	994	971	994	0.98
18	18	0.0016	0.096	13.1	2.5	1	23	1055	1078	1055	1078	0.98

Sequence Information

Coding Sequence: ATGGCTTCACTCACCAGTCTACACCAAAACATACAGCAAAGCTCAATAGATAGCTATGGTCCAAAACAAACTACAATCGATTTGGTCGGCGGCATACTCTGCAATATATGCCGACTGACATTTGCAACTAAACAGAGCTACGACAGCCACTATCGCAGTCATGGTGCTTCCGCCGAGATCACTTACACTTGCAACATTTGTTATAAGGAGATAGTCGGCTATCCAAGCTTCCGTGGTCATTGTTATACAAGTCACGTAATTAAGGAACGATTCCAATGTGAACATTGCTTGAAACAATTTTCGAAAATCAGTAACCTCAAAGAACATGTCAACAAAATACATAAATTCAAGTGCCCCACATGCAGAAAAGAATTTTCCAGTAAGAAAGAAATGCTGCTACATAAGATCATTCACAATAGCGTGGATCAACCTCCATACAATTGCAACACTTGTAAAATTGAAATTGACACTGCAGATGAGTGCAAAGAACATGTAGAGAAGCACTTGAAGTTTCTGTACTCCTGTCCAATTTGCAACGATAACATATCGGACAAAGATAATGCTACTGATCATATGAAGAAACATTTTGGCGACGTACTTAGCGAAGACAAAAATAAAGAGGCTCCGCAATCATCCGAAGACACAACCGAAGAATTCAGTGGAATCATGTGCCAGTTCTGTTCCCTAATACTCGGGGACAGAGTTAAATTTGATGCTCATTTCTCTTGCAAACATGGTGATGAAGACATAGTTTACATGTGCGTTGAGTGTGGGAAGAGCTTTGAAAAATATTCAGTATTCAAGAATCACTGCAACGATCATACCTTGAGGAATAGATACAAATGCGAGATATGCAAGAAAGCATTCCCTCGTCTGTCGATGCTAGCGGCGCATACGGCGGCTTGCCAGGCTGCGGGTGCGGCGCGGGGGCAAAAGGTCTTCGCGTGCCCGTCGTGCAGTCGCCGGTTCGCTAGCATGGGTCGTTGGCGGGAACATCTGCGGACGGCTCACGACATTCACCGACATCTACCGTGCCCGCATGAACGCTGTGATCGCACTTTTGATACTCCGAAACAGCTGATTCTTCATCAACAATCCCACGAGATTACCAATCAGAATTTCTGCAGTCAATGCAGACTTGTCTTCTCAGATGTAGCTTCTTGCGAGCGTCATATAGATATGCACAGAAAAAAGGTCTTCTTTTGCCCCATATGCAAGCGAAATGCGAAAGATAAGAAAATTATTCTAAATCACATATCGAAACACTTCGACGTCATTTCCCACCTATGTAGGATTTGTGGTAAAATTTATAACACCAAAAAATTTTTGATCGAACATTTGAAGACACATAAGAAGGTTAAAAGTTATTCTTGCACGCACTGCAATAAGAGTTTTATAAAGCCTTACCAGTTGGAACAACATGTCAACACACATACTGGTGTGAAGCCATACAAATGTCCCGTCTGTGTTAAATCGTTTTCGAACTACCCCAATTGGGTCAAGCATGTACGCAGGATGCACCATGAAGAGAGTATTTACATCAAAAATCCAATAACAGAGTCTACAGAGTCAGATAATATTGATAAGGAGGTTTCCACAGTAGAAAAAGCAGCTGACGGAAAAGATTTACTCAAATCAAATAATCTTTTCAGCAATGATATCATTGATACTGATAATAACAAAGTCAATAATAACTATGAAATTTGGAACACTAATGAACAAATTTGTAACATGAGTGTCGAACAAAATATCATCGATGTTCAAAACTTACAGGGCATTGATATAGAAAAAATAATTAATGATGACACAGCGGTTGTAAATAACCAAGTATCTGCTATGGAGATAGCAGTTGATGGGAATTATGTAGCTTCTACTGATATTTCAAAAACATCGCATGAAAACTTTTTTAACATTGTTGAAGTAAATCATGTAAAGAGTATTAACATTATAAATCAGCTTGTTGATAATGCGGTGGGTATTGGCAATGAAGGTTCTGTAATATTAACAGCAACAAATAAGGAATATGGGACAGCTAAAGATATTCAAAAGGATGATGTTGAACAAAGTTCAATAGCTGATGAACAAATTTCAAACACCCCCACTAGCGATAAACCACATAAATGTCCTATATGTGAAAAGACATTTGCAAAATATTCTTACATGAGTAAACATGTCGGCAGAGTACACCATATTAGAAGTATTGACATAAAAAATATCATTATAGATCCTAAAGATATCGTCGAAGAAAGTTCTCCCATGGAAACAATAGTGAATGACGAACATGAAACATCTACTGATACCGTAAAAGGAGATACTGATGAACAAGTTTCCAATACTGAGAAACTTAAAATACAGATTACCTCTAATGTAGAGTATAATCTCGACGCATCCAAATCTCATAAATGTCCGATTTGTGACAAGTCATTCGCAAAGCACCCCTATATGACGAAACATGTTCGTAAAGTACATAATAAAAAGGCAATAGATGTTAAGAATTCCACTACAGATCAACAGCTTGTTGGTGATGAGATTTCTACAATTGAGAAAGGGGTTGATGAAGAAAATGAAACATCTATGGATATTTTAAAAGATATTAATGATCATCAAAGCCCAGAAAATCCTGGTATAGCTAAACCTCATAAATGTCCTATATGTCAAAAATCATTTGCAAAACATCCATATATGACCAGACACGTTCGTAAAGTTCACAATAAAAAGGTGACCGATATTAAAAATGCAATTACTGATAACAAGGAGGGTGCTGATGAAGAACTATCTGCAATGGAAACGTCGATCGATGGAGAATGTGACATATCTATAGATAACATAAGAGATGATAATGGTATCCAACATCCGAATGCAGACAAACTTTCGAATGTAGAACATCTCACGCCCACAGAGCTCAAACCTCATAAATGTCCTACATGCGACAAGTCATTTGCCAAACATTCATACATGACGAAACATATCCGCACTGTACATAACAAAAAGGGTATCGATATTAAAACTCCTATTAGTGATCATAAAGAGAATATGGACGACGAGGGATCTGCAATGGAAACAGGGGGTGATGAAGACAATGATATGTTTACGGATAATTCAAAAGATGACAACGATGATCGATTTTCGAATACAGATCACGTGGATGCCGGCTACAAGCCTTACAAATGTCCTATGTGTGAAAAGTCGTTTGCAAAAGACGGCTATTGTAGGAAGCACATCCGTAGAGTACACTATAAGAAGGGTATGGACATCAAGAGTCCAGTCTTCGATCACAGCAAGGGCACCTTGATAGGAACATTGATCGAAAAAGAAAATCAATTAGTTGAATCGCAAGATTACTTAAATAATGAAATAACTAATATGCACTCGATTGCTAACATCGTTAATGAAACCGAAGCTGCTGATTGTCTTAATGATATAGACGACGCTAACGCTAGTATGGACTTCGCAAATGTTAAATTGGAAAATTACATTTTTAGTGTGCAAAGAGATAGTCCGATGAGTATCGTTCCTGCTATGCCAGATGGAAAATATTTGCTCAATGATAATAACGACGGAAACGCTACGATTAATAAAGATTTGTTTAAGAATGACAGGGAAAATAATCCTTCGATTAGTAAAGATATAATGTACGAGACTGATGGTAATGCACCGATTGGAACCGAACTCGTCAATGAAAATGGCGAGGCCATCGCGCTTGTCGAGAAAGATTTGTTCAACGCCAATAGTAAGGAAAGTGCTACAGTTGAAAAAGTATTGTTTAGTGGTGGCAGTGAACAAAACGATAATCCTATCGATATCCTCGAATACATCGCAGAAATGCCTGAGAATAATTCGCTGTTTGTTCCTGTGATCAATCAAGAGGCGCTGACGTGTAGCGCGCCGGCCGCGGCGCCGGTGGAGGGCGTCTCGTTCCCGTGCGAGTACGGGCCCGAGTTCAGCGCCAGCTTCGACCACGCCACCACCGGGTTCATCGACCTCGACGACCACATGTTGCCGCACATCGACCCGCTGCTCACCATCAACAACCAAACGTGCGTACAGACCGAACAGAACTACGATTACAGCGTCATCGACGCCGCGGACCTCCTCGCGCTGGGCAACGAGGCCTGCGCCAAGTACGCGCCCAACGACCAGCCCTACAACCAGTATAACGTGACCTGGGACCCGCCCATCATCACCAAACTCTGCGACCAATACGCCTACGGCTACGGCGAGATGCCCGAGGCCAGTAGGGTACCTATAATGAACACGGATATATTTTGA
Protein Sequence: MASLTSLHQNIQQSSIDSYGPKQTTIDLVGGILCNICRLTFATKQSYDSHYRSHGASAEITYTCNICYKEIVGYPSFRGHCYTSHVIKERFQCEHCLKQFSKISNLKEHVNKIHKFKCPTCRKEFSSKKEMLLHKIIHNSVDQPPYNCNTCKIEIDTADECKEHVEKHLKFLYSCPICNDNISDKDNATDHMKKHFGDVLSEDKNKEAPQSSEDTTEEFSGIMCQFCSLILGDRVKFDAHFSCKHGDEDIVYMCVECGKSFEKYSVFKNHCNDHTLRNRYKCEICKKAFPRLSMLAAHTAACQAAGAARGQKVFACPSCSRRFASMGRWREHLRTAHDIHRHLPCPHERCDRTFDTPKQLILHQQSHEITNQNFCSQCRLVFSDVASCERHIDMHRKKVFFCPICKRNAKDKKIILNHISKHFDVISHLCRICGKIYNTKKFLIEHLKTHKKVKSYSCTHCNKSFIKPYQLEQHVNTHTGVKPYKCPVCVKSFSNYPNWVKHVRRMHHEESIYIKNPITESTESDNIDKEVSTVEKAADGKDLLKSNNLFSNDIIDTDNNKVNNNYEIWNTNEQICNMSVEQNIIDVQNLQGIDIEKIINDDTAVVNNQVSAMEIAVDGNYVASTDISKTSHENFFNIVEVNHVKSINIINQLVDNAVGIGNEGSVILTATNKEYGTAKDIQKDDVEQSSIADEQISNTPTSDKPHKCPICEKTFAKYSYMSKHVGRVHHIRSIDIKNIIIDPKDIVEESSPMETIVNDEHETSTDTVKGDTDEQVSNTEKLKIQITSNVEYNLDASKSHKCPICDKSFAKHPYMTKHVRKVHNKKAIDVKNSTTDQQLVGDEISTIEKGVDEENETSMDILKDINDHQSPENPGIAKPHKCPICQKSFAKHPYMTRHVRKVHNKKVTDIKNAITDNKEGADEELSAMETSIDGECDISIDNIRDDNGIQHPNADKLSNVEHLTPTELKPHKCPTCDKSFAKHSYMTKHIRTVHNKKGIDIKTPISDHKENMDDEGSAMETGGDEDNDMFTDNSKDDNDDRFSNTDHVDAGYKPYKCPMCEKSFAKDGYCRKHIRRVHYKKGMDIKSPVFDHSKGTLIGTLIEKENQLVESQDYLNNEITNMHSIANIVNETEAADCLNDIDDANASMDFANVKLENYIFSVQRDSPMSIVPAMPDGKYLLNDNNDGNATINKDLFKNDRENNPSISKDIMYETDGNAPIGTELVNENGEAIALVEKDLFNANSKESATVEKVLFSGGSEQNDNPIDILEYIAEMPENNSLFVPVINQEALTCSAPAAAPVEGVSFPCEYGPEFSASFDHATTGFIDLDDHMLPHIDPLLTINNQTCVQTEQNYDYSVIDAADLLALGNEACAKYAPNDQPYNQYNVTWDPPIITKLCDQYAYGYGEMPEASRVPIMNTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01082659;
90% Identity: -
80% Identity: -