Basic Information

Insect: Thymelicus lineola
Gene Symbol: -
Assembly: GCA_963932265.1
Location: OZ010689.1:16424308-16429925[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.018 1.7 10.2 0.8 3 23 34 54 33 54 0.98

2 18 0.00024 0.023 16.1 2.5 1 23 91 114 91 114 0.97

3 18 0.00093 0.087 14.2 1.0 1 23 116 138 116 138 0.98

4 18 0.0062 0.59 11.6 0.2 1 23 173 195 173 195 0.98

5 18 0.058 5.5 8.6 3.1 1 19 252 270 252 274 0.90

6 18 5.2e-05 0.0049 18.2 0.1 1 20 280 299 280 300 0.96

7 18 0.058 5.4 8.6 0.3 1 23 314 337 314 337 0.95

8 18 8.7e-05 0.0082 17.5 0.6 2 23 344 367 343 367 0.95

9 18 0.85 80 4.9 1.4 3 23 375 395 374 395 0.96

10 18 0.17 16 7.1 0.5 1 23 400 422 400 422 0.96

11 18 0.00014 0.014 16.8 1.9 3 23 430 450 428 450 0.96

12 18 6.2e-05 0.0058 17.9 2.1 1 23 456 478 456 478 0.98

13 18 3.7e-05 0.0035 18.7 1.3 1 23 484 507 484 508 0.97

14 18 0.0015 0.14 13.6 3.1 1 23 705 728 705 729 0.93

15 18 3.3e-05 0.0032 18.8 1.8 1 23 799 822 799 822 0.97

16 18 0.00012 0.011 17.1 1.8 1 23 881 904 881 904 0.97

17 18 2.9e-06 0.00027 22.1 3.0 1 23 972 995 972 995 0.98

18 18 0.074 7 8.3 3.3 1 23 1056 1079 1056 1079 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.018	1.7	10.2	0.8	3	23	34	54	33	54	0.98
2	18	0.00024	0.023	16.1	2.5	1	23	91	114	91	114	0.97
3	18	0.00093	0.087	14.2	1.0	1	23	116	138	116	138	0.98
4	18	0.0062	0.59	11.6	0.2	1	23	173	195	173	195	0.98
5	18	0.058	5.5	8.6	3.1	1	19	252	270	252	274	0.90
6	18	5.2e-05	0.0049	18.2	0.1	1	20	280	299	280	300	0.96
7	18	0.058	5.4	8.6	0.3	1	23	314	337	314	337	0.95
8	18	8.7e-05	0.0082	17.5	0.6	2	23	344	367	343	367	0.95
9	18	0.85	80	4.9	1.4	3	23	375	395	374	395	0.96
10	18	0.17	16	7.1	0.5	1	23	400	422	400	422	0.96
11	18	0.00014	0.014	16.8	1.9	3	23	430	450	428	450	0.96
12	18	6.2e-05	0.0058	17.9	2.1	1	23	456	478	456	478	0.98
13	18	3.7e-05	0.0035	18.7	1.3	1	23	484	507	484	508	0.97
14	18	0.0015	0.14	13.6	3.1	1	23	705	728	705	729	0.93
15	18	3.3e-05	0.0032	18.8	1.8	1	23	799	822	799	822	0.97
16	18	0.00012	0.011	17.1	1.8	1	23	881	904	881	904	0.97
17	18	2.9e-06	0.00027	22.1	3.0	1	23	972	995	972	995	0.98
18	18	0.074	7	8.3	3.3	1	23	1056	1079	1056	1079	0.92

Sequence Information

Coding Sequence: ATGGCTTCACTCACCAGTTTACaccaaaacatacagaaaagcgCAATAGAATGCTATCTTCCAAAACAAACTACAATCGATTTGGTTGGCGGTATACTCTGCAACATATGCCGGCTGACATTTGCAACGAAACAAAGCTACGACAGCCACTATCGTGGCCACGGTACTTCAACAGAGATCACTTACACATGCAACATTTGTTACAAGGAGATAGTTGGCTATCCAAGCTTCCGTGGTCATTGTTATACAAGTCACGTAATTAAGGAACGATTCCAATGTGAACATTGcttgaaacaattttcaaaaatcagTAACCTCAAGGACCATGTTAACAGAATACATAAATTCAAATGCCCTACGTGCAGGAAAGAGTTCCCCAGTAAGAAAGAGAGACAGCTACACCAGATCATCCATAACAGCCTGGACCAACCTCCATATAATTGCAACACTTGTAAAATTGAAATCGACACAGCCGATGAGTGCAAAGAACATGTAGAAAAGCACTTGAAATTTCTGTACTCCTGTCCAATTTGCAACGAGAACATAACGGACAAGGATAAAGCTACTGATCATTTGAAGAAACATTTCGGCAACGTACTTAGCGACGACAAAAATACTGAGACCCCTCAACCATCAGAAGACACATCTGAAGAATTCAGTGGTATAATGTGCCAGTTCTGCTCCTTAATCCTTGGGGACAGAGTGAAATTTGATGCCCATTTCTCTTGCAAACATGGCGACGAGGATATTGTTTACATGTGCGTGGAGTGTGGAAAGAGCTTTGAAAAATATTCCGTATTCAAGAATCATTGCAACGATCATACTTTGAGGAAAAGATACAAGTGCGAGCTTTGCAAGAAGACGTTCCCTCGTCCCTCGATGTTGGCGGCGCACACCGCGGCGTGCcaggcggcgggcgcggcgcggGGGAAGAAGGTGTTCGCGTGCCCCAAGTGCAGCCACCCCTTTGCCAGCTTGGGGCGCTGGCGGGAACATCTGAAGTTGGCGCACGACATCCACGACCATCTGCCCTGCCCCCATAATGGATGCGATCGCACTTTTAACACTCCGAAACAGCTAATTCTTCATCAACAGTCGCACGAGATTACCAATCAGAACTTTTGCAGTCAATGCAGGCTTGTCTTCTCGAATGTTGCTTCTTGCGAGCGTCATATAGATATGCACAGAAAAAAGATCTTCTTTTGCCCCATATGCAAGCGAAACGCAAAAGATAAGAAAGTTATAATAAATCACATATCCAAACACTTCGACATCATTTCCCATCTCTGCAGGATTTgtggtaaaatttataattctaaaaaatcTTTGATCGAACACTTGAAGACGCATAAGAAGGTAAAAAGTTACGCCTGCACGCACTGCAATAAGAGTTTTTTGAGACCGTACCAGCTGGAACAGCACGTAAACACGCATACTGGTGTCAAGCCGTACAAATGTCCCGTCTGTGTAAAGTCGTTTTCCAACTACCCAAATTGGGTCAAGCATGTACGCAGAATGCACCATGAAGAGAGTATTTACATCAAAAATCCAATTATTGATTCTACAGGCGCTGATAGTATTGACAAGGAGGAATCCACAGTGGAAAAAGCTGTTAGTGAAAAAGATTTCACAAAATCTAATAATctttacaaaaatgatatttatgcTGATAATAATACAGTAAACAATAATTATCGAGTTTCGAATATAAACGAACAAATTTCTAATGTTAATGTCGAGCAAAATATCACTGAAGTTCACCACGTAGGGAGCATTGATATTAAAAGCTTAATTAACAATAACACAATGGTTGCAAATAACAAAGAATCGGCAATGGAAATAGCAGTTGATGAACAATACGAGATATCTATTGATATTACAAAAACATCGcatgaaaacatttttaacatCGTTGACGTAAACCATACAAAGAGTGTTAACATTgtgaatgaaataaatgatcACACGGTAGGTGTAGGGAATGAAACATCTATATTATTAACAACAACAGATAAAGATATTGGGTTATCTAAAGATATTCAAAACGAAGATGTGGAACAAAGTTCAATTACAGATGAACAAATTTCGAACACACTTAATGGCGACAAACCTCACAAGTGCCCAATATGTGAAAAGACATTTGCGAAATACTCTTACATGAGCAAACATGTAGGCAGAGTACACCATATCAGAAGTATTGACATTAAAAACCTCATAATAGATCATAAAGACAGTGCCGATGACGAGGGCTCTGCCATGGAATTAATGGTGAATGAAGAGAATGAAACATCTACAGATAATGCAAAGGGAGATAATGATGAACAGTTGTTCAATACTGATAAACTCAAAATACAGACGAACTCAAAAATAGAAAATCTCGATGGCTCCAAGCCTCATAAATGTCCTATTTGCGACAAATCATTTGCAAAGTATCCCTATATGACAAAACATGTTCGTAAGGTACAcaacaaaaagaaaattgaTGTTAAGAATTCTATTATAGACCAAAAATTGAATGTTATTGATAAGGTTTCGGCAATGGAAACAGGGATTGATGAAGAAAATGAGGCTTCTATGGATATTTCAAAAGACAGTAGTGATCAGAATTCAAATTCagaaaatcaaaatattgaTAAACCTCATAAATGTCCTATATGTGAAAAATCATTTGCAAAGTATCCATATATGACCAAACATGTTCGTAAAGTTCACAATAAAAAGattattgatattaaaaatgCCATTGTTGATCAAAAGGAGAGTGTTGATGAAGAGATGTCAGCAATGGAAACATCAATCGATGGAGAATGTGACATATCCATAGATAACATAAAAGATGATAATGGTGTTCAATTTTTAAATACAGAGAAACTTTCAAATGTAGATCATCGCACGAATATAGAGTCCAAGCCTTATAAATGTCCTACATGTGATAAGTCATTTGCAAAACATTCATATATGAGTAAACATATCCGTACCGTACATAACAAAAAGAGTATTGATATGAAAAATCTCATTGGTGATCATAAAGAAAGTATAGATGATGACGGATCTGCAATGGAAACAGTGGGCGATGAAGAAAATGATACATTTACAGATAACTCAAAAGATGACAATGATGATCGATTGTCGAATACAGATCATGCGGACACCGGTTACAAGCCTTATAAATGCCCCATGTGTGAAAAGTCATTTGCAAAAGATCGCTACTGTAGGAAACACGTAAGTAGAGTGCACTATAAAAAGGGTGTGGACATAAAGAGTCCAATCTCTGATCTTACCACAGGTTCGGTAGGAACGTTAATCGAAAAAGAAAATCAATTAGTTGAACCACAAGATTACTTGAACAACGAAATGCCTAATATGCATTCTATTGCTAGCATTGTTAATGAAACCGAGACCACTGATTGTTTTAACGATATCGTTGATACTAATGCTAGTATGGACTTTGCAAACGTCAGGTTGGAAAACTACATTTTTAGTGTACAAAGAGAAAGCCCAATGGATATTGTTCCTTCTATGCCAGATGGAAAATATTTGCtcaatgataataatgttgGAGTCACTACGATtaataaagaatttttcaagGATAACGGCGAAGATACTTCGATCagtaaaaatataatctatGAAAGCAAAGGGAATGTACCGATTGGAACAGAACTGGTTAATGAAAATGGCGAGGCTCTCGCTCTCGTAGAGAAAGATTTGTTCAATGCAAATAGTAAGGAAAGTGCTACAGTTAATAAAGATTTGTATGGTGGTAATAGCGAACAAAACAATAATCCCATTGACATTCTTGAATACATCGCGGAAATGCCTGAGAATAATTCGTTGTTTGTTCCTGTGATCAATCAAGAAGTGCTCACAGGGGCCGTGGCCGAGGCGGTGTCGTTCCCGTGCGAGTACGGGCCCGAGTTCAGCGCCGGGTTCGACGCCGCCGCCGCCGGGTTCATCGACCTCGACGACCACATGTTGCCGCACATCGACCCGCTGCTCACCATCAACAACCAGACCGACCCCCCCACCCTCGCCTACCAGACGTACGACGCGGACCTGCTCGCGCTGGGCAACCAGGCCTGCGGTAAGTACGCCCCGACCGAGCAGCCCTACGACCAGTACAACGTGACCCTCGGCTACCAGCCCGGCTGGGACCCCCCCATCATCACCAAGCTCTGCGACCAATACGCCTACGGCTACGGCGAGATGCCCGAGGCCAGTAGGGTACCTATAATGAACACGGATATATTTTGA
Protein Sequence: MASLTSLHQNIQKSAIECYLPKQTTIDLVGGILCNICRLTFATKQSYDSHYRGHGTSTEITYTCNICYKEIVGYPSFRGHCYTSHVIKERFQCEHCLKQFSKISNLKDHVNRIHKFKCPTCRKEFPSKKERQLHQIIHNSLDQPPYNCNTCKIEIDTADECKEHVEKHLKFLYSCPICNENITDKDKATDHLKKHFGNVLSDDKNTETPQPSEDTSEEFSGIMCQFCSLILGDRVKFDAHFSCKHGDEDIVYMCVECGKSFEKYSVFKNHCNDHTLRKRYKCELCKKTFPRPSMLAAHTAACQAAGAARGKKVFACPKCSHPFASLGRWREHLKLAHDIHDHLPCPHNGCDRTFNTPKQLILHQQSHEITNQNFCSQCRLVFSNVASCERHIDMHRKKIFFCPICKRNAKDKKVIINHISKHFDIISHLCRICGKIYNSKKSLIEHLKTHKKVKSYACTHCNKSFLRPYQLEQHVNTHTGVKPYKCPVCVKSFSNYPNWVKHVRRMHHEESIYIKNPIIDSTGADSIDKEESTVEKAVSEKDFTKSNNLYKNDIYADNNTVNNNYRVSNINEQISNVNVEQNITEVHHVGSIDIKSLINNNTMVANNKESAMEIAVDEQYEISIDITKTSHENIFNIVDVNHTKSVNIVNEINDHTVGVGNETSILLTTTDKDIGLSKDIQNEDVEQSSITDEQISNTLNGDKPHKCPICEKTFAKYSYMSKHVGRVHHIRSIDIKNLIIDHKDSADDEGSAMELMVNEENETSTDNAKGDNDEQLFNTDKLKIQTNSKIENLDGSKPHKCPICDKSFAKYPYMTKHVRKVHNKKKIDVKNSIIDQKLNVIDKVSAMETGIDEENEASMDISKDSSDQNSNSENQNIDKPHKCPICEKSFAKYPYMTKHVRKVHNKKIIDIKNAIVDQKESVDEEMSAMETSIDGECDISIDNIKDDNGVQFLNTEKLSNVDHRTNIESKPYKCPTCDKSFAKHSYMSKHIRTVHNKKSIDMKNLIGDHKESIDDDGSAMETVGDEENDTFTDNSKDDNDDRLSNTDHADTGYKPYKCPMCEKSFAKDRYCRKHVSRVHYKKGVDIKSPISDLTTGSVGTLIEKENQLVEPQDYLNNEMPNMHSIASIVNETETTDCFNDIVDTNASMDFANVRLENYIFSVQRESPMDIVPSMPDGKYLLNDNNVGVTTINKEFFKDNGEDTSISKNIIYESKGNVPIGTELVNENGEALALVEKDLFNANSKESATVNKDLYGGNSEQNNNPIDILEYIAEMPENNSLFVPVINQEVLTGAVAEAVSFPCEYGPEFSAGFDAAAAGFIDLDDHMLPHIDPLLTINNQTDPPTLAYQTYDADLLALGNQACGKYAPTEQPYDQYNVTLGYQPGWDPPIITKLCDQYAYGYGEMPEASRVPIMNTDIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01082659;
90% Identity: iTF_01438244;
80% Identity: -