Basic Information

Insect: Nylanderia fulva
Gene Symbol: Hr39
Assembly: GCA_005281655.1
Location: NW:96383-123695[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.8 3.9e+03 -3.4 8.8 52 163 174 285 134 319 0.63

2 5 3 1.5e+04 -8.1 11.4 76 158 326 413 292 432 0.42

3 5 5.1e-08 0.00025 20.3 0.0 1 21 498 518 498 525 0.92

4 5 0.45 2.2e+03 -2.6 0.0 88 113 556 581 532 588 0.71

5 5 5.8e-70 2.8e-66 224.3 0.0 193 408 692 902 674 902 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.8	3.9e+03	-3.4	8.8	52	163	174	285	134	319	0.63
2	5	3	1.5e+04	-8.1	11.4	76	158	326	413	292	432	0.42
3	5	5.1e-08	0.00025	20.3	0.0	1	21	498	518	498	525	0.92
4	5	0.45	2.2e+03	-2.6	0.0	88	113	556	581	532	588	0.71
5	5	5.8e-70	2.8e-66	224.3	0.0	193	408	692	902	674	902	0.93

Sequence Information

Coding Sequence: ATGCACGATGgTAAAGGAGTGTGTAAATATCTCGGGGGACAGAATGGAGTGACGGTGTCGGTGGTCTCGACCTCGGTGCTGGGATGCGGAAATTCCGCGGTCCCGACGAGCGGAATCTGCACGAATGCGGGGCCGCCGCATAGTATCGGCATCGGAATCGGCGGTATCCTCGCCGCGAACGCGGCCGACGTCGACGATCCCGAGGACAGCGACGGCGAGATCAGCAAGATTGACTTTCGGGGCGTGAATTTGCGCTCGAAGAAGAAACGCGACGTATCGGGTAATCAGAACGGCGACAAGATCAGCGACGGGGACGCGAATGGCGACGGCGCGGGATGCTGCGACGATAATTCGCAGCAGCAGCCCGAGAGACCGATGTCGTGGGAGGGAGAACTCTCGGACCAAGAAATGTCTTCCAATACAATTACTAATCAGGACCATAATGAGGAAACGTCTATGGAAGGAGTTCAGGTGTGCAGTACGAGTCCTGGACCTATGGAACAGAAATTTCCAATTAAATCAGAGCCAGATTTTCGATCTAGTCCGGCTTTCACAATAGGATCCTTTCACGACGCTGGATTGCCTATGACACACAACCAACAATTGCAACAACAGCAACAGCAACAACGCGGTATTGAAAATCTAGAGCAGACTCAACAAAGCGACCTGCCGCTTCTCGTAGGCAAGCTTCTCGGCGGATACAACAATTCCACGCCTAATCACAGTCCTATTCTCAATCCGCGACATCATCTAACCAAGCACAGTCATACTAGATCGCAGGTACCGTCACCAGATTCCGCCATTCATTCCGCATACAGCGTCTTCAGTTCACCGACGCAAAGTCCTCACGCAGCACGACACTCCGCCCTAGGTGCTGGAAGTCCGATACCGTCCTCGTCGTTATCCCTCTCTCGGCATAGCTTCAACAATTCGACCTCTTCATTATCCTTGTCGCTGTCGCATTCGCTTTCGAGAAACAACTCGGACGCTTCCAGTAGCTGCTACAGCTACGGCTCGCTTAGCCCGCCTACGCATTCACCCGTCCAGCAACCGAGACATCCGCATTCGCACTCGCAGCATCACCAGCATCAGGTGGCGCAAAGTAGTCCGTTGCATCTTCCGGCAGCCTCGTCCGCTGTCGCCGCGCATCATTACTCGTCCTCTTCCGTGCCAGGTGCGGAACTGTCCCCGGACGGTCATTCGGTCGCGGAGGATCAGGAAGACTGTAGAGTACCCTCGGCCCCGTCGGGTATTTCCACCAGACAGCAACTGATAAACAGCCCCTGTCCGATTTGCGGTGACAAGATAAGCGGATTTCATTACGGCATCTTCTCGTGCGAGTCATGCAAGGGCTTCTTCAAGCGTACCGTGCAAAATCGGAAGAACTATGTGTGCCTTAGAGGCGCAGGCTGTCCGGTCACCGTGGCCACGAGGAAGAAATGCCCGGCCTGCCGCTTCGAAAAGTGCCTGAACATGGGTATGAAGCTCGAGGCGATCAGGGAGGATCGTACCAGGGGTGGCAGGAGCACGTATCAGTGCACCTATACTCTCCCGGCGAATCTCGTCGGTAGTCCCGCCGGCGGTATGGCCGGCAACGAAAAACTGACGGCGGCCGGAAATTGTAGTCCGGCACCGGCCGGAAGCGAGCACCATTACTCGGTCAGATATCACTCGAATCATTCTCACAAGATGCAGGTGCCGCAACTCTTGCAAGACATTATGGACGTGGAGCATCTCTGGCATTACAACGACAACGATCGGGTGAGCGGGGGAATTTCTGGGAATACGAGGAACATCTCCGTCGGCGGCGACGGCAACAACATGTTGCTCGGCGGATTCGGAGGAAGCGGCCCGTCGACACTCGGCAGCGGAACCGCGAGTGTTATTGGCGCCGGAAATAACGTAGGCGCGGTGGAATGTTCGTCGAACGATTCGAGCAACGTCGATACAACAAACAACAGAGGAGGTGGaggtggaggaggaggagagtcGGGTAGCCCCACCGGCTCGACTTCCACAGGGGCACCCGATCAACATTCCACGAACGGCAATACCGTGAATAATAGCAATTCTCAAATCGCCAGTAATTCCAATAATGGCAATCCGACGCAACATCCGGACTTTCTGTCTAATCTGTGCAACATCGCGGACCATCGGCTCTATAAGATCGTCAAGTGGTGCAAGAGTCTGCCGTTATTCAAGAATATCTCGATCGACGACCAAATCTGTTTGTTGATCAACTCTTGGTGCGAGCTGCTACTCTTCTCCTGCTGCTTTCGCAGCATGAGCACTCCCGGTGAGATCAGAGTGTCTCTCGGCAAGTCGATCACTTTGGAACAAGCTAGAGAGCTTGGTTTAGCGACTTGCATCGAGAGGATGCTCGCTTTTACCAACAATCTACGAAGGCTGAGAGTAGACCAATACGAATATGTTGCAATGAAGGTGATCGTGCTCTTAACGTCCGACATAAGCGAATTAAAGGAACCCGAAAAGGTCAGAGCTTCTCAGGAAAAAGCCCTTCACGCATTGCAGCAATATACAATCGCGAGGTATCCAGAAATGCCTGCCAAATTCGGTGAACTATTATTGAGAATTCCAGATCTACAAAGAACGTGTCAAGCAGGAAAAGAATTGCTCAGTGCAAAACGTGCCGAGGGAGAAGGCAGCTCCTTTAACCTTTTAATGGAATTGTTGAGAGGGGATCACTGA
Protein Sequence: MHDGKGVCKYLGGQNGVTVSVVSTSVLGCGNSAVPTSGICTNAGPPHSIGIGIGGILAANAADVDDPEDSDGEISKIDFRGVNLRSKKKRDVSGNQNGDKISDGDANGDGAGCCDDNSQQQPERPMSWEGELSDQEMSSNTITNQDHNEETSMEGVQVCSTSPGPMEQKFPIKSEPDFRSSPAFTIGSFHDAGLPMTHNQQLQQQQQQQRGIENLEQTQQSDLPLLVGKLLGGYNNSTPNHSPILNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPIPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPHSHSQHHQHQVAQSSPLHLPAASSAVAAHHYSSSSVPGAELSPDGHSVAEDQEDCRVPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFEKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLVGSPAGGMAGNEKLTAAGNCSPAPAGSEHHYSVRYHSNHSHKMQVPQLLQDIMDVEHLWHYNDNDRVSGGISGNTRNISVGGDGNNMLLGGFGGSGPSTLGSGTASVIGAGNNVGAVECSSNDSSNVDTTNNRGGGGGGGGESGSPTGSTSTGAPDQHSTNGNTVNNSNSQIASNSNNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARELGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDISELKEPEKVRASQEKALHALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01267641;
90% Identity: iTF_00885153;
80% Identity: iTF_01077544;