Basic Information

Insect: Nowickia ferox
Gene Symbol: L
Assembly: GCA_936446695.1
Location: CAKZFO010000003.1:2167549-2182380[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 8.7e-06 0.00085 20.6 1.7 1 23 252 274 252 274 0.98

2 19 0.72 71 5.2 5.8 1 23 280 302 280 302 0.98

3 19 3.8e-07 3.7e-05 24.9 3.1 1 23 308 330 308 330 0.99

4 19 1.7e-05 0.0017 19.7 0.3 1 23 336 358 336 358 0.98

5 19 5.4 5.4e+02 2.4 0.8 2 23 423 446 422 446 0.84

6 19 0.0055 0.54 11.8 0.2 2 23 474 496 473 496 0.96

7 19 0.046 4.5 8.9 0.7 1 23 597 619 597 619 0.97

8 19 0.18 18 7.0 2.9 2 23 627 648 626 648 0.96

9 19 0.00068 0.067 14.7 0.2 1 21 656 677 656 680 0.90

10 19 0.18 18 7.0 0.1 1 19 685 703 685 705 0.93

11 19 2.4 2.3e+02 3.5 0.7 1 23 715 738 715 738 0.92

12 19 0.002 0.19 13.2 1.2 1 23 777 800 777 800 0.98

13 19 4.9 4.8e+02 2.5 0.9 1 23 983 1007 983 1007 0.89

14 19 0.0013 0.13 13.8 4.8 2 23 1016 1038 1015 1038 0.97

15 19 0.19 19 7.0 0.1 1 23 1044 1066 1044 1066 0.92

16 19 0.044 4.3 9.0 0.6 2 23 1074 1095 1074 1095 0.96

17 19 1.2 1.2e+02 4.4 0.5 2 23 1186 1207 1186 1207 0.94

18 19 0.01 1 10.9 0.0 1 23 1217 1239 1217 1239 0.97

19 19 0.016 1.6 10.3 0.7 1 23 1246 1268 1246 1268 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	8.7e-06	0.00085	20.6	1.7	1	23	252	274	252	274	0.98
2	19	0.72	71	5.2	5.8	1	23	280	302	280	302	0.98
3	19	3.8e-07	3.7e-05	24.9	3.1	1	23	308	330	308	330	0.99
4	19	1.7e-05	0.0017	19.7	0.3	1	23	336	358	336	358	0.98
5	19	5.4	5.4e+02	2.4	0.8	2	23	423	446	422	446	0.84
6	19	0.0055	0.54	11.8	0.2	2	23	474	496	473	496	0.96
7	19	0.046	4.5	8.9	0.7	1	23	597	619	597	619	0.97
8	19	0.18	18	7.0	2.9	2	23	627	648	626	648	0.96
9	19	0.00068	0.067	14.7	0.2	1	21	656	677	656	680	0.90
10	19	0.18	18	7.0	0.1	1	19	685	703	685	705	0.93
11	19	2.4	2.3e+02	3.5	0.7	1	23	715	738	715	738	0.92
12	19	0.002	0.19	13.2	1.2	1	23	777	800	777	800	0.98
13	19	4.9	4.8e+02	2.5	0.9	1	23	983	1007	983	1007	0.89
14	19	0.0013	0.13	13.8	4.8	2	23	1016	1038	1015	1038	0.97
15	19	0.19	19	7.0	0.1	1	23	1044	1066	1044	1066	0.92
16	19	0.044	4.3	9.0	0.6	2	23	1074	1095	1074	1095	0.96
17	19	1.2	1.2e+02	4.4	0.5	2	23	1186	1207	1186	1207	0.94
18	19	0.01	1	10.9	0.0	1	23	1217	1239	1217	1239	0.97
19	19	0.016	1.6	10.3	0.7	1	23	1246	1268	1246	1268	0.95

Sequence Information

Coding Sequence: ATGATGGCTTTAAAGATGTTATACCGAGGACCCAGTTCAAGACTAGaaaatttgattgaaaaaattcaaGCCACCAAGGAGATTGTTAATGCcgacaTGTACTCCACGCATACTTCGTCAAGTTATTCACCTTCTATATCAGATGGTACTATTACACCAAATTCCttacatcatcatcatcatcatcaccaccaTCAGCACTTAGCTGTGCCACCACATTTATCATTCCCCAATTCGGCTGCTTATGAAGAAGATACAACATCGTTGGCCCTACAGACACAACGTCTGCCAAGACAAAAAACTAATGGCACTTTGGATGGCGCTGAATATGAAGACAACGCCAATGACAACGACAACGACCACAACAACGAAAGAATGCACAAAAATGATACCAAACTGTGTGAAGACAATGTCACAATTGTTGCCGACAATAAGACAAACGCAAATATTTCAGAAAGTGGCGAAGAACATCATCAGCAACAGCATCAGCAACAACATAACCATCACCATCATCAACTAAAACGTCATGGTCGCCATCATCGTTATGCTGAACATGCCTTAAGAATGCCTTCAAAATTACGCAAAATCGATAGGGATTCAACGGTTGGTGGCAATGGAGTCAGTGCCGCCGGTGttgctgctactgctgctgATGGTGTTGGTGTTGGTGTAACAGCAAATGCAGTCAAGTTTGATAAGTTGACAGGAGATGGCATTAAAAGTGGTAATAATGCTGCTAGTGCCGACGGATCCTATCAATGTCAGTTCTGTGATAAATCATTTCCGCGTCTTGGTTATTTGAAAAAACATGAACAGAGCCATGCTGAGCATTTGCCGTTCAAATGTGATTACTGTGCACGCCTGTTTAAGCACAAGCGTTCCCGTGACCGTCATACGAAATTACATACAGGCGATCGTCGTTATCGCTGTCCGCATTGCGAGGCAGCATTTTCAAGAAGTGATCACTTGAAGATCCACATGAAAACGCACGACAACCAAAAACCATTCCAATGTACCATTTGCAATCGTGGCTACAATACTGCTGCGGCCCTAACATCCCACatgcaaaatcacaaaaagCAGGCGGCTCTTTTAGCTGCTGGTGGCAACCCCCAAGCCCTCAATTATAGTCCGCGTTCTACCGGCTCAGCTTCCAGTAATGGCAGCTTACAAAAAAGACGTTACGGCTTGGCAGCAGCAGCCGAACAAAGTCCCAATCGTCTTGAGTATTCCAAGCGCGGTCGTTCGTCATCATCAAATATGCTCAAGTGCACGTTTTGTTCGAAATCTGATTTCACTGCAGTGGAACAGCTTAATACTCATCTGCAGACTCAACACGAAAAAGAGCTGGCACATTCCATGACACCACCCTCAACAAATCACCATCAAGCGGTAGAAAATCACAATGCATTCCAGTTGTCATGTGAATATTGTACCATGAAATTTCCTAATATCGCTGGCATGTTTCAGCACATGCGTTCAGCCCATTTGGACCGTTTGACCAGTCCCAATTCTTACTTTGAGCATTTCAATCGTTTGGCGGCCTCGGGTACATTTAGTCCACGCCTGTTAACGGGACCACCACTAAGAAGTGCGGCCAGTGCAGAAGAAAACAtaattaaagaagaaaataatttatcaaGTCCCAAGTCAGCGGATGCAGCGAATCGCCAAAGTGAAGATGAACCTACTGATTTGAGTCAAAATAATCGCAGATCAATGACACCAGCAAATACTCCCCAAAACTCTCCGCAGGAGCACTTGCCGGCCAGCGAAAAGCCAGGCCTATTCTTCTGCAATCAATGCAATGCCGGCTTGCCCGACTTTGAGTCCTTCCGCAATCATTTGAAAACCCACATTGCCCAAGGGCTTAATTTGGTGTGCCACCACTGCGGTATGCTGCTGAGGGAACATTCCGAATATGAAAGACATGTGATATCACATTTTCTCATTACCAATTCGGAATACAATTGCCCGGGAAATTGCCAAAAATCCTTTGGAAAGCCGGAGGAATTGCAAAAACATCTCGTGGATCAGCATGCCATAACAATGTTTAAGTGTAGCCTGTGCAGCGAAATGTTCGAATCGAAAGTAGCCATACAAGTACATTTTGCTTGTACACACTCAGCGGAAACCAAAATATTTCGTTGTTCGGCCTGCATGGATGTGTTTAGAAGCGAAAACGAGTTTAACGTGCACGTCAAAACGCGCCATCAAGCTGTTAACAATAATGCGGCGCCAGTAAACTCTTTGCAGTGTATGTTTTGTCGCACAATATGTTCCTCTGACCTGGAGATGCAATTCCACTTGGCCGCACATGCCAGACAATTTCGTTGTCCCTCTTGCCCGGAAACGTTCCATGTCGAATTTCTACTCGATCGTCATATGCAAACACAACATGGTGGTTTAGAGCGCCCACCACCACCACCGCAGCCACCAcatcctcctcctcctcctgcCCAGCAAACTATCGCTGAAGAGCACACATCTCCCGTAGCCATTCCAAATGCTATATCGCCCATGAACTCGTTGTATGTGAATGCTTTGTTTGGCAAAACGCCTTTAATGCCTCTGGCTccacaaaataacaacaacagcatttTAGATTACAACATGGCCTTTGCCAGCCACATTAATAAGGGTCTATTTCCCAATGCCAACCCAAACAAGTTCTACAATCCTTTACAAATTGATACAAACGCCATGAAACATTCAGCCTTGATGTACGGTTTATCGCAAAGATATTTCGATACCAACCGCACGGTTATGGAAATGtatcaacagcaacaacagcagcatcagcaacagcaacaacaacaacatcaccCCCACGATAGCAATAAAGCTACAGGAAATTATTTCATAAGTCCCAAACAGCCGGCTGCAGCAGTGCACGACGCCCATCATCCCAGAGATTTGCCCACCTCACCCATAAACAATACCGGCTTCAGTTGTGGCATTTGCGAACGCAATGATTTTCGCACCGAGTCCGAAGTCCACTCCCATCGCAAAATTGTGCACAATCTAAAGACGGGAGTCAGTCTGAAATGCGCCTATTGCTCGGGCAATTTTAAATCACGCAGTGAACTCGAACATCATATGAAAACCTGTCACAATTCCACCGGCAAGCACAAGTGTCTGATATGCGATGAAATCTTTCCCTCGCCCGCTATACTGGCCGAACATAAGCTACAACATTCCAAGGTGGGACAGTCGGGAAGATGTTCGCATTGCTCCAAAGCACTGGCAGATGTCAGTGCCTTCAAAGTTCATTTGAGCGAACACAATACGGAAGGCCAAATGCCAGTACAGTGCATATGCTGTCGCCAGTCATTACATTCAGAATTTGAGATTGGGCTGCATGCAAAATTTCACGTTATCAATCCCACTGTGCAGGAGAACGTGTGTGCTCTTTGCTTAGAACCCATCACCCATTCAGCCAGTGAGGCCAAAGTTTGCGAAAAATGCTGTCGCAAACACAATCTCAATGCCAAGTTCAAGCCACGTGAACACTTTGAGCGACCTGCCATCGAATTGAAGCAGTACATTGAAAATCGCTGTAATCTGTGCAAAATGATTTTGCCGCATGCCCAAAAACTACAAGAACACTTGGTCGAACATACCTTTGCCGGCTGTGAGGAGCGTGGCTTCAACTGCTACATATGTTCGGCCGTTTTCACTGCTCCTGCTGGCCTGCTCAACCACATGCTGGAGCATGGCACTAATGCTAAGCCCTACGATTGCAATCTGTGTCCAGAAAAGTTTTATTTCCGCGCTGAGTTGGACCATCATTTAATCGATCATGAGATGCGGGCAGTTGCACCGGCAGCAGTAAAAAGTGAGCAGGAGCTATcaacaaaaaaagaagagacTTTGAATAGCATGAAATCGGATAAAGCCGCAGCAGCTTTAAACGCCGTAAAGCAAGAGGTAGTGGAAAACGATCATAGTTCCAACAATGCTGAAGAGGATGAGTACATTGAAGTGGAAAAGGTGCatgaaaataacaacaataataacaacaacaacaccagcaATAACATGGGCAGCCAAGTGAATGATACAGTGTCGCACAAATCTGCACACACTAGAAATGAATCTAATGAACAGGCCAGAGATGAAAaagcataa
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEIVNADMYSTHTSSSYSPSISDGTITPNSLHHHHHHHHHQHLAVPPHLSFPNSAAYEEDTTSLALQTQRLPRQKTNGTLDGAEYEDNANDNDNDHNNERMHKNDTKLCEDNVTIVADNKTNANISESGEEHHQQQHQQQHNHHHHQLKRHGRHHRYAEHALRMPSKLRKIDRDSTVGGNGVSAAGVAATAADGVGVGVTANAVKFDKLTGDGIKSGNNAASADGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAALLAAGGNPQALNYSPRSTGSASSNGSLQKRRYGLAAAAEQSPNRLEYSKRGRSSSSNMLKCTFCSKSDFTAVEQLNTHLQTQHEKELAHSMTPPSTNHHQAVENHNAFQLSCEYCTMKFPNIAGMFQHMRSAHLDRLTSPNSYFEHFNRLAASGTFSPRLLTGPPLRSAASAEENIIKEENNLSSPKSADAANRQSEDEPTDLSQNNRRSMTPANTPQNSPQEHLPASEKPGLFFCNQCNAGLPDFESFRNHLKTHIAQGLNLVCHHCGMLLREHSEYERHVISHFLITNSEYNCPGNCQKSFGKPEELQKHLVDQHAITMFKCSLCSEMFESKVAIQVHFACTHSAETKIFRCSACMDVFRSENEFNVHVKTRHQAVNNNAAPVNSLQCMFCRTICSSDLEMQFHLAAHARQFRCPSCPETFHVEFLLDRHMQTQHGGLERPPPPPQPPHPPPPPAQQTIAEEHTSPVAIPNAISPMNSLYVNALFGKTPLMPLAPQNNNNSILDYNMAFASHINKGLFPNANPNKFYNPLQIDTNAMKHSALMYGLSQRYFDTNRTVMEMYQQQQQQHQQQQQQQHHPHDSNKATGNYFISPKQPAAAVHDAHHPRDLPTSPINNTGFSCGICERNDFRTESEVHSHRKIVHNLKTGVSLKCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGRCSHCSKALADVSAFKVHLSEHNTEGQMPVQCICCRQSLHSEFEIGLHAKFHVINPTVQENVCALCLEPITHSASEAKVCEKCCRKHNLNAKFKPREHFERPAIELKQYIENRCNLCKMILPHAQKLQEHLVEHTFAGCEERGFNCYICSAVFTAPAGLLNHMLEHGTNAKPYDCNLCPEKFYFRAELDHHLIDHEMRAVAPAAVKSEQELSTKKEETLNSMKSDKAAAALNAVKQEVVENDHSSNNAEEDEYIEVEKVHENNNNNNNNNTSNNMGSQVNDTVSHKSAHTRNESNEQARDEKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01237143;
90% Identity: iTF_01399883;
80% Identity: -