Nudd039540.1
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- IBTK
- Assembly
- GCA_905163555.1
- Location
- LR991069.1:15850802-15873900[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8e-14 5e-11 44.4 0.0 6 79 545 616 540 625 0.87 2 4 9.1 5.7e+03 -0.9 0.0 86 108 695 717 688 718 0.80 3 4 3.2e-14 2e-11 45.6 0.0 8 107 743 846 738 849 0.84 4 4 3.7 2.4e+03 0.4 0.1 80 106 851 877 846 880 0.87
Sequence Information
- Coding Sequence
- ATGAGTAAGAACATAGATGTAGATTGCACTCGCCGATGCAAATCTAGAAGCCATGGCCAAGCACTTACTGGAGCCATTACGAAGAGATCAGTCAGTGATGAAGCGCTGGCCAGTTTCATCAAGGCAACATGTGCTAACTTCTTACAGGCTTTTGATTTTGAGGGTCGCACAGCACTCCACATGGCATGTTCTCGCGGCCGGGCAGCTCTCATGGAGTGGCTAGTCCACCACTCCTCTGAGGCCTTTATCAATGCAAGAGACAGAGAGTCTGGGTACACTCCACTGCATCGGAGCATCTTCTATGGGCAAATACATACTGCTGTAGCcttaatgaaaattgGCGTCAACACGGATATCGTCGACAAGGATGACTATCGGGCTCTAGAGCACGCCATGCTAGACCGGCATTACATGTACAAGCATGCCGGCAGCGAGCCGAGCGATGTATACGTGTGGGGCAGCAACTGCAACTACACACTGGGTACAGACACGCAGCAGCCACGCAGCGTGCCAGAGCTACTGGGGTGCTTCAGCCGGGCCAACGCGAGCGTACAACAGGTGTGCCTGGGCAAGTTCCACAGCATCTGGCTATGCGGTGGAGAAGCCTGGGCGTGCGGGCAGACGGGGCGCGCGGGGAGCGGTCGCGGCACGCTGCTACGCCCGGCGCCACTGCGGCTGCCAGAACCAGTGGTGCAAGTCGCTGTGCTGTTAGACTCCACTGTGTTCCTCATGCAGAGCGGAATGGTGCTCCAATATACCTTAAACAGCGCGGACACCTCCCCCATCACAAACAGCTCgaccctgaaactgccgtcaaCCAAGCCCATCCTGAAACTCTCTTCGCCGCTAGGCCTGTGCTCTGGGCGCGCCCACGCCGTCGTGTGGAACACTCACGCAGTTTACACGTGGGGTGTTAACTGGGGACAGCTTGGGCACTCGCAGGAGGACAAAGTCGTCACTGCGCCTAAACGAgttGCAATATCCATGAACAACAAAGAAGACGCGGGCATACAACTAGTGGGTGCAGGCGATGCGGCTACAGCAATAACTACTAGCCGTGGCGACGTCTACTTGCTACATAAACACATCTGCAAGAAGATCGCTATCAAaCAGATAAACCTACGGCAAGTGTGTGTGGAGGCGAAAGTGAACGAGACGGGGACATACTCGCGCGTCACCGTGTTATTGCTGACCAACGTGGGGCAGCTCCTGCTGTGGCAGGACACCACCAATCAGCTAACCAGATGCGTCTTCGGCTTAAGCCACCAGACAATCATAACCCACTTGGCGCTAACCCATGACGCTATCTACTTCACCACCAAATATGGCGAGGCATTCATTGGCTATATCTCGCGCAAGACCACGCCCACTGCGCCGCAGCCAATCAGAAAGGAAAAGGAGCGAGACAGCAACAAGAGCGCGCTGGTCAAGTTTCTTGAGAAGGATGATTGTACGTCGGTTCGGATTGTGAAGATACCGAACGTGCATAGGGCGGTATCGATAGTTGTTGACAATGAGGGATTGAACTTCGCCTGTCTGCAGATTAAACCTACGTGTGGGCTCACGGCACTGCCTGAGCTCTCTCCCACCAGTTTGCATAAACACATGGAAACTCTAATGGAAACTGCTACAGAAGATGACATTCTACATGACGTTATTTTCAAGGTTGGCACAAAACTCTATCCAGCCCACATTTTCATTATCGCCTCAAATAGCGAGCACCTCTACAAGTTGTACCAGGAAAACAGAAGGAACGAAGAGGATAAGCCAATCATCAACATAGAGATGCACCCAGAAGTGTTCGAGAGAATACTGCGGTACATGTACACTGGTACTTGCGATGTCGCCGAGTTAGGACCTTGCAGTTTGAAGATAAGGAGGGAAGATCTGAATACCTTGAAGAAGGAAAAGGAtgtagaaattgtaatagaagaTCCAAATGTCATTGACAATGCCTCAGAAATCTCAGCGTTCGAAGTACACAAGCACCAGAACAACAGAAACAAGAAGGGTCGCGCTCGGCGCAACCTCGAGACACCGCCGGCACCGCGGCAGAATCTGTACTGCGACCCGGTGAAGCTTGTGCAGGCCGCCGCCAAGCGGTTGCATGTCATGGGGCTGCATAAACTGCTGGAGAAATTCTTCTACAAAGACGGCACAATCTGCCTGAAAGAGAGCGCGACGTACGCCAAAAACCCTCCATTATACTGGGAGCGCAGCAGCCTACAGGATCTAGTGGACACGAGCGTGGTCGCCAAGGATGGCGCGCTCATACCGGCGCACAAGTGTGTGCTTGCCGCACGGCTGGAGTACTTCCACGGGATGTTCATGCACTCTTGGACTGAGAGTAAACTATCATCAAAAGTGACCTTACCCATCAACCACGGAATTCTCCAGCCAGTCATAGATTTCCTGTACACAGACACGTGTCCGGAATTAGAAAGCTCAGATAGCATAGACTTTATATGCAGTATGCTCATAGTCGCCGACCAACTCTTCATAAGTCGCCTAAGAGAGATATGTGAGGTCGCCCTTTCAAACCTCATCACACTGCGGAATTGCGCTGAGCTCTGCCAATTTGCTCACACTTACAACGCTACTCAGCTAAAACAGTGCTGTATGGAATTCATATCGCTAAATATATCAAGCGTACTTGAAAGTAGGTCCCTTGAAGTCTTAGAAGAAACACTGTTAGAAGACATTTCCAACTACTATTGCAAGTTTAACCCTATCATGTCTTCTAGAGTCATTACGCCCTTCTTCAACGCGCCAGACGATGAAGTCATCAATGAATGTGCTAAAAATAACCCTGTTGTTTTAAATGTCATTAACGAAGATCTGAAAAAGGACGATAGTGTTGTCGAAACAAGTAAGAAGAAGAAATCTAAGAAAATCGAATACACTGAGAGTGAGAAAACTAGGATGCAGTATGAATCCGTCAGTTCAGTGACGTCATTAGACCTGTCAAATGATATCTCAGGTGACGTCACGCTGTCTTTAAGTAATATATCTATTGAGACAGAGAAGAGTTCAAAAGCGAATAAGGATAAGTGGACCGAAGTGCCATCGGCGCAACAGAAACAACAGAAAGTCGTCCAGGCGAGACTGAAAGCCTTAAGCAGCGCTAAAGAGATCCTGAACGAAACTCCAGTAGAATCCTTCACTAAGCTAACTAGAAACAGTTCCTCAAGTGCCATCAACAACCCAGCCCACCCCAATACACCACCTTCCTCATCCCGCATGTCAGTATCGCCTAAAGAATCCTCCATAGCCGAGACGGCTTGGGGCTCGCCTGGTAACCTTGTTATTAACCACATAGGTCCCAAATTGTCCCAAAAGCAGCGAAAAAAGTTAGCCATGGAAGGTAACCATCCTACTCAGAACTTGGCTCACTACTTAGATGGTAAAGGAGTTGGGGGTCCTCCAGACAAGCCAAGAAATCCGTGGAAGATTGTGGAAGTGCCGGTGGCTAGTAGCAGTCCTAAGCAGAAGGACATGGGATTCAACCAGATCCTGGCTGATCAGAAGAAGCAGAAGGATGACTCGTCGAGGATCATGACTAAACCACTGTTTTTGACACAGctggAAGACAAAGCCATAGAAGAACTAGAAAGGTTCTACAATGTACATGAACTAGATGATGAACTTATCACGGTTCGGCGTATCGAATTGCAGGTGTCTTCGCCGCAATGGGTACACACTGCCAAATGA
- Protein Sequence
- MSKNIDVDCTRRCKSRSHGQALTGAITKRSVSDEALASFIKATCANFLQAFDFEGRTALHMACSRGRAALMEWLVHHSSEAFINARDRESGYTPLHRSIFYGQIHTAVALMKIGVNTDIVDKDDYRALEHAMLDRHYMYKHAGSEPSDVYVWGSNCNYTLGTDTQQPRSVPELLGCFSRANASVQQVCLGKFHSIWLCGGEAWACGQTGRAGSGRGTLLRPAPLRLPEPVVQVAVLLDSTVFLMQSGMVLQYTLNSADTSPITNSSTLKLPSTKPILKLSSPLGLCSGRAHAVVWNTHAVYTWGVNWGQLGHSQEDKVVTAPKRVAISMNNKEDAGIQLVGAGDAATAITTSRGDVYLLHKHICKKIAIKQINLRQVCVEAKVNETGTYSRVTVLLLTNVGQLLLWQDTTNQLTRCVFGLSHQTIITHLALTHDAIYFTTKYGEAFIGYISRKTTPTAPQPIRKEKERDSNKSALVKFLEKDDCTSVRIVKIPNVHRAVSIVVDNEGLNFACLQIKPTCGLTALPELSPTSLHKHMETLMETATEDDILHDVIFKVGTKLYPAHIFIIASNSEHLYKLYQENRRNEEDKPIINIEMHPEVFERILRYMYTGTCDVAELGPCSLKIRREDLNTLKKEKDVEIVIEDPNVIDNASEISAFEVHKHQNNRNKKGRARRNLETPPAPRQNLYCDPVKLVQAAAKRLHVMGLHKLLEKFFYKDGTICLKESATYAKNPPLYWERSSLQDLVDTSVVAKDGALIPAHKCVLAARLEYFHGMFMHSWTESKLSSKVTLPINHGILQPVIDFLYTDTCPELESSDSIDFICSMLIVADQLFISRLREICEVALSNLITLRNCAELCQFAHTYNATQLKQCCMEFISLNISSVLESRSLEVLEETLLEDISNYYCKFNPIMSSRVITPFFNAPDDEVINECAKNNPVVLNVINEDLKKDDSVVETSKKKKSKKIEYTESEKTRMQYESVSSVTSLDLSNDISGDVTLSLSNISIETEKSSKANKDKWTEVPSAQQKQQKVVQARLKALSSAKEILNETPVESFTKLTRNSSSSAINNPAHPNTPPSSSRMSVSPKESSIAETAWGSPGNLVINHIGPKLSQKQRKKLAMEGNHPTQNLAHYLDGKGVGGPPDKPRNPWKIVEVPVASSSPKQKDMGFNQILADQKKQKDDSSRIMTKPLFLTQLEDKAIEELERFYNVHELDDELITVRRIELQVSSPQWVHTAK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00680717;
- 90% Identity
- iTF_00657342;
- 80% Identity
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