Nudd019295.1
Basic Information
- Insect
- Notocelia uddmanniana
- Gene Symbol
- dmd-4
- Assembly
- GCA_905163555.1
- Location
- LR991058.1:22429580-22444671[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-25 3.5e-21 76.4 10.8 1 47 8 54 8 54 0.98 2 2 1.5 2.1e+04 -2.9 4.6 3 11 283 291 280 291 0.90
Sequence Information
- Coding Sequence
- ATGCTAAGTGGCGGGCGGGCGAGGGTGCCGAAGTGCGCGCGGTGTCGCAACCATGGACTCATCTCTAGTCTCCGCGGGCACAAAAAGGCGTGCCGGTACCGCACCTGCCAGTGCCCGAAGTGCGGTCTCATCAAGGAGCGGCAGCGGATCATGGCGGCTCAGGTGGCCTTAAAAAGGCAGCAGGCTGCTGAAGACAAGATAGCCCTGCACTTGGCCTCAGTAGAGAGCGGGACTGCTTTAGCAGCGTTGCCTCCTGGTCGCATATACGGCATGAGGGTAACGGGGCCCTGCCCGAGCCCCGACGAGCCAGATTCTGCGGCAGATGACCACACTCCTATACACATCGATAGCGAGACGAGTGACTCCCTGCCAGACTGCTGCGTGGCTTCTCCTGACTCTGGCGGCAACACTTCAACCTCTCCGAGACCACGCGTCAGTGCAAGCGAGGAGGCTGAAGCAGAGACGTCAGTGAGCACAGCCGGCCTTGAGATGCTGAGCAAACTGTTCCCGGGCAAGAAACGCTCCGTACTGGAACTGGTGCTGCGACGGTGCAACCACGATCTGCTGCGCGCTGTCGAGCATTGCAATGTGCAACATGCCCAGAATGACAAAACATTGCTGGCAAGCGCCGGAGCGAGCACCAGCTACGAGAGCCCCGTGTCGAGCTCAGAGGAGTCGCGATGGTCGGCGTTTCGACCTGTGGGACAGCGGCCGATGCTGCCTGCACTGGTAATGGGCCGCGTGTGTGGGTCCGAGTGGTTGGTGCCGCTGCCAGCATTACCAGCGCTATCGGGGCCGCTGCTGTTGCCACTGCAGCATCAGCCGCCGGTTTGCAATCCCTGTGCGCCTGACTGCAGGCAATGTAATCGGCATTAA
- Protein Sequence
- MLSGGRARVPKCARCRNHGLISSLRGHKKACRYRTCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTALAALPPGRIYGMRVTGPCPSPDEPDSAADDHTPIHIDSETSDSLPDCCVASPDSGGNTSTSPRPRVSASEEAEAETSVSTAGLEMLSKLFPGKKRSVLELVLRRCNHDLLRAVEHCNVQHAQNDKTLLASAGASTSYESPVSSSEESRWSAFRPVGQRPMLPALVMGRVCGSEWLVPLPALPALSGPLLLPLQHQPPVCNPCAPDCRQCNRH*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00412553;
- 90% Identity
- iTF_00660361; iTF_00658444; iTF_00656187; iTF_00659489; iTF_00148518; iTF_00149444; iTF_00772928; iTF_00412553; iTF_00411507; iTF_00411508; iTF_00410328; iTF_00871339; iTF_00289658; iTF_01135802; iTF_01134833; iTF_00462436; iTF_01464204;
- 80% Identity
- -