Cpom013333.1
Basic Information
- Insect
- Cydia pomonella
- Gene Symbol
- dmd-4
- Assembly
- GCA_033807575.1
- Location
- CM066350.1:17298167-17304756[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-25 2.7e-21 76.4 10.8 1 47 8 54 8 54 0.98 2 2 2.4 1.8e+04 -3.0 5.3 2 11 283 292 282 292 0.90
Sequence Information
- Coding Sequence
- ATGCTAAGCGGCGGACGGGCGAGGGTGCCAAAATGTGCCCGGTGCCGCAACCACGGGCTCATATCCAGCCTTCGAGGACACAAGAAGGCTTGCCGCTACCGCACCTGCCAGTGCCCGAAGTGCGGACTCATCAAGGAGCGGCAGCGTATCATGGCGGCTCAGGTAGCCTTAAAGAGGCAGCAGGCAGCGGAAGACAAAATAGCCCTGCATCTGGCCTCCGTTGAAAGCGGGACTGCGCTGGAGGCGCTGCCCCCTGGCCGCATATACGGCATGAGGGTCACCGGGCCATGTCCAAGCCCTGACCAGCCCGATTCAGCGGCCGATGACCACACGCCTATACACATCGACAGCGAGACGAGCGATTCTCTGCCCGACTGCTGCGCGGCTTCTCCGGATTCCTGCGGCAACACCTCAACCTCTCCGAGGCCACGtGTTAGTGGCAGCGAAGAAGCCGAGGCAGAAGCTTCCGTGAGCACAGCAGGTCTCGAGATGCTGAGCAAGTTGTTCCCGGGCAAGAAGCGCTCAGTGCTGGAGCTAGTTCTACGTCGGTGCAATCACGATCTGCTGCGTGCTGTTGAGCATTGCAATGTGCAACATGCCCAAACCGACAAAACATTACTGGCCAGCGCCGGTGCAAGCACCAGCTACGATTCCGTATCGAGCTCCGAAGAGCGCTGGTCAGCTTTTAGACCAGTCGGGCCGCGGCCATTGCTACAGCAACTACCTGCGTTAGTCATGGGCCGGGTCTGTGGTTCAGAGTGGTTGGTGCCCCTGCCTGCGCTGCCGGCGCTGTCTGGACCTCTGCTACTGCCATTGCAGCATCAACCTCCGGTGTGCAACCCCTGCACGCCTGACTGTAGGCAATGTAATCGACACTAA
- Protein Sequence
- MLSGGRARVPKCARCRNHGLISSLRGHKKACRYRTCQCPKCGLIKERQRIMAAQVALKRQQAAEDKIALHLASVESGTALEALPPGRIYGMRVTGPCPSPDQPDSAADDHTPIHIDSETSDSLPDCCAASPDSCGNTSTSPRPRVSGSEEAEAEASVSTAGLEMLSKLFPGKKRSVLELVLRRCNHDLLRAVEHCNVQHAQTDKTLLASAGASTSYDSVSSSEERWSAFRPVGPRPLLQQLPALVMGRVCGSEWLVPLPALPALSGPLLLPLQHQPPVCNPCTPDCRQCNRH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00412553;
- 90% Identity
- iTF_01072542;
- 80% Identity
- iTF_00411508;