Basic Information

Insect: Nomada ruficornis
Gene Symbol: rxraa
Assembly: GCA_951802695.1
Location: OX637857.1:8499226-8511331[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.8e-45 1.1e-41 144.1 0.1 202 407 210 411 162 413 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.8e-45	1.1e-41	144.1	0.1	202	407	210	411	162	413	0.90

Sequence Information

Coding Sequence: ATGTTGAATTCGCAGGAAGATTTTTGGTATCACCGAGCCCGTTTAGgGCTGAGCCTGGACAACAGTAATATGTCCATGTCCTCTGTGGGCCCACAGAGTCCACTGGACATGAAGCCTGACACAGCGAGCCTCATCAACCCTGGAAACTTCAGCCCCTCTGGTCCCAATAGTCCAGGATCCTTCACCGCTGGTTGTCACAGCAACCTCCTGAGTACGTCGCCGAGTGGGCAGAACAAAGCTGTCGCCCCATATCCACCGAACCACCCTCTTTCCGGAAGCAAACACCTCTGCTCGATCTGTGGTGACCGTGCCAGTGGCAAGCATTATGGCGTCTATAGCTGCGAGGGTTGCAAAGGATTTTTCAAGAGGACCGTGCGCAAGGACCTGTCGTACGCGTGTCGAGAGGAAAAATCCTGCATCATCGACAAACGGCAGAGAAATCGATGTCAGTATTGCAGATATCAGAAATGCCTGGCGATGGGCATGAAGAGGGAGGCAGTACAAGAAGAACGCCAACGTACCAAGGAAAGGGATCAGAGTGAAGTGGAGAGTACCAGCAGTTTGCACTCGGACATGCCGATCGAGCGCATCCTGGAAGCGGAGAAGCGTGTCGAGTGCAAGATGGAGCAGCAGGGGAATTACGAGAATGCAGTGTCGCACATTTGCAACGCCACGAACAAACAGCTGTTCCAGCTGGTAGCATGGGCGAAACACATCCCGCATTTTACGTCGTTGCCACTGGAGGATCAGGTACTTCTGCTCAGGGCCGGTTGGAACGAGCTGCTGATAGCCTCCTTTTCCCATCGTTCCATCGACGTGAAGGACGGTATCGTGCTGGCAACGGGGATCACCGTGCACAGGAACTCGGCGCAACAGGCTGGCGTGGGCACGATATTCGACCGAGTGCTTTCCGAGCTTGTGTCGAAGATGCGCGAGATGAAGATGGACAGGACCGAACTCGGCTGTCTGAGATCCATCATACTCTTCAACCCGGAAGTTCGAGGGCTGAAATCCATCCAGGAAGTCACTCTGCTTCGCGAGAAGATCTACGCGGCCCTGGAGGGTTACTGTCGCGTCGCCTGGCCCGACGATGCCGGGAGATTCGCGAAACTATTATTACGCCTGCCAGCGATCCGATCGATCGGACTGAAGTGCCTGGAGTACCTGTTCTTTTTCAAAATGATCGGCGACGTGCCCATCGATGATTTCCTCGTCGAGATGCTCGAGTCGCGGTCAGACCCTTAG
Protein Sequence: MLNSQEDFWYHRARLGLSLDNSNMSMSSVGPQSPLDMKPDTASLINPGNFSPSGPNSPGSFTAGCHSNLLSTSPSGQNKAVAPYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDVKDGIVLATGITVHRNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSIILFNPEVRGLKSIQEVTLLREKIYAALEGYCRVAWPDDAGRFAKLLLRLPAIRSIGLKCLEYLFFFKMIGDVPIDDFLVEMLESRSDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00306305;
90% Identity: iTF_00216420;
80% Identity: iTF_00982344;