Nruf000959.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nomada ruficornis
Gene Symbol
Hr39
Assembly
GCA_951802695.1
Location
OX637846.1:4735236-4740497[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.45 2.8e+03 -2.2 4.6 115 156 39 82 17 102 0.53
2 5 1.5 9.3e+03 -3.9 9.1 54 163 295 405 284 439 0.60
3 5 4 2.5e+04 -6.6 9.8 70 151 440 521 411 546 0.44
4 5 2.1e-08 0.00013 22.0 0.1 1 28 613 640 613 693 0.73
5 5 7.2e-70 4.5e-66 224.4 0.0 194 408 780 989 761 989 0.94

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCTGGCCCAGGCCCAGGTCCTGGCTGGTGGCCAGCCTCGCAGTCCTGGAAGACGAACTCCTGCACCGCCGCCTCCACGTCCGCCACGTCCGCTAGTTCCGTCAGTTCCGCCGCTCCAGACAACTCCGCCTCCGTCTCTTCGTCCTGCACCACCTCTACCTCCTCCTTGGCGACCACAACTTCGGTCACTTCTTCGACCAGTTGCTGTACCTCGACCCCTGGCGGACCGTCGTGCACGATCACCGCGGCCCGTTCCTGCGAGACAGGAAAGAATGTCTCTGTCACGACGATCAGTGTCCCACCTAACCAGGATATACACGACGGGAAGGGTATATGCAAGTATCTTGCCGGCCAAAATGGCGTGACGGTATCCGTAGTCTCCAACTGTGGCTCGGTATTAGGTTGTGGAAACGCCAATGTCGTGTCCACCACGGGAATCGGAACCAACACCGGATCGCAGAGTATCGGTATCGGCATCGGAGTCAATGTCCTGACCCAGAACACCGCGGATGACGACGCAGAGGACAGTGACGTCGAGATCAGCAAAATCGACTTCCGAGGGGTGAATTTGCGcacaaaaaagaaacgagactTGTCGGGTAGCCAAAGCGGGGAAAAAATCGGCGATAGGGACACCGAGGATGGGAATGGTTGTTACGATGGGAACGACGTGTCCCAGCAGCAACCAGAAAGACCGATGTCATGGGAAGGGGAACTATCTGACCAAGAAATGTCCTCTAATACAATTACGAATCAAGATACGCATGAAGATACGTCAATGGAGGGAGTTCAAGTATGTGGCGCAAGTCCTGGGCCCGTGGAACAGAAATTTCCAATAAAGACGGAACCAGACTTTCAATCTAGCCCGGGATTCGCATTTGCTTCTTTCCACGAGGCCGGATTACCTTTGGCGCATGGCCAACAAATGccgcagcagcagcaacagcagcaacacaATATTGAAAATCTGGAACAGACTCAACAAAACGATTTGCCTCTTCTCGTAGGAAAACTACTTGGTGGTTACAATAGTTCTACTCCAAACCATAGCCCAGTGTTAAATCCAAGACATCATCTGACAAAGCATAGCCATACGAGATCGCAGGTCCCATCGCCGGACTCAGCGATTCATTCCGCATACAGCGTGTTCAGCTCGCCGACGCAAAGTCCCCATGCAGCTCGTCACTCCGCGTTAGGCGCAGGAAGCCCGGTTCCATCCTCGTCGTTATCCCTCTCGCGGCACAGCTTCAACAATTCGACGTCCTCGTTGTCATTGTCGCTGTCACACTCCCTCTCGAGGAACAATTCCGATGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTTAGTCCACCCACGCATTCACCCGTCCAGCAACCAAGGCATCCGCAACATCATCAGCACCAGGTGACTCAAGGAAGTCCTCTTCATCTGCCCACAACAGCCTCCCCCGCCATTGCACACCATTACACTTCCTCTGCACCGGGTTCTGAGCTGTCACCGGAAGGACACGCCACCACAGACGACCAGGAAGATTGTCGAATACCATCAGCGCCTTCTGGTATTTCTACTAGGCAGCAACTGATCAATAGCCCATGTCCAATTTGCGGAGACAAGATCAGTGGTTTTCATTACGGAATCTTCTCGTGCGAGTCGTGCAAGGGATTTTTTAAACGCACCGTCCAGAATCGAAAGAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCGGTCACTGTTGCTACCAGGAAGAAATGCCCCGCCTGCCGCTTTGACAAGTGCCTCAATATGGGTATGAAGCTGGAGGCAATCAGAGAGGATCGCACCAGAGGTGGACGAAGTACGTATCAATGTACGTACACTCTTCCAGCAAGTCTGGTAGGTAGTCCTGCGAGCAGCATGGCCAGTGACAAGTTAGCCACTAGTGGAAACTGTAGTCCAGCCCCAGCCGGCAGTGAGCATCACTATACAGCCAGGCACCACTCAAATCACTCTCATAagattcaggtggtgccgcaACTACTGCAGGATATCATGGATGTGGAGCACTTGTGGCATTACAATGATAACGATCGTATGTCCGGGGTTCAAGCTGGAGGAGCAAACGCTGGGAGAAACAATGACATGTTACTTGGAGCCGGAAACAGGGGAGGTTCGGGAACAGGAAGTGATACATGTCCAGGTGTCGAATGTTCTTCCAACGGAACCGCGGGAAACGGGAATCCTAGTAACAGAAGAGACGACAGGTCGTGCTCTAACGTTACTACAGTGGGCAACGAACAACGTGCTGCGCCCATTAACAGCAGCCCCCAAATCAGTAATACGAACGGTAACCCCACGCAGCATCCTGACTTTCTGTCGAACCTCTGCAACATCGCTGACCACCGACTCTATAAAATAGTGAAATGGTGCAAGAGTTTACCGTTGTTTAAGAACATTTCCATCGACGATCAGATATGCCTGTTAATCAACTCCTGGTGCGAGCTGTTGCTCTTCTCGTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACATTAGAACAGGCTAGACAGCTTGGTTTGGCGACCTGCATCGAGAGGATGCTCGCCTTTACTAATAATCTGAGAAGGCTTCGAGTAGATCAGTACGAATACGTGGCTATGAAgGTAATAGTACTGTTGACCTCTGATACGAGTGAATTGAAGGAACCTGAAAAAGTTCGAGCATCTCAGGAAAAGGCTTTACAAGCATTGCAACAGTATACCATAGCAAGGTACCCGGAAATGCCTGCCAAGTTTGGTGAATTGCTATTGAGAATTCCGGATTTGCAAAGGACATGCCAAGCAGGAAAGGAATTGTTAAGCGCGAAACGTGCTGAAGGAGAAGGCAGCTCATTCAATTTGTTGATGGAATTATTGAGAGGGGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGPGPGWWPASQSWKTNSCTAASTSATSASSVSSAAPDNSASVSSSCTTSTSSLATTTSVTSSTSCCTSTPGGPSCTITAARSCETGKNVSVTTISVPPNQDIHDGKGICKYLAGQNGVTVSVVSNCGSVLGCGNANVVSTTGIGTNTGSQSIGIGIGVNVLTQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDLSGSQSGEKIGDRDTEDGNGCYDGNDVSQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGASPGPVEQKFPIKTEPDFQSSPGFAFASFHEAGLPLAHGQQMPQQQQQQQHNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVTQGSPLHLPTTASPAIAHHYTSSAPGSELSPEGHATTDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASSMASDKLATSGNCSPAPAGSEHHYTARHHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRMSGVQAGGANAGRNNDMLLGAGNRGGSGTGSDTCPGVECSSNGTAGNGNPSNRRDDRSCSNVTTVGNEQRAAPINSSPQISNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733987;
90% Identity
iTF_01539632;
80% Identity
iTF_01070421;