Nruf006286.1
Basic Information
- Insect
- Nomada ruficornis
- Gene Symbol
- retn_1
- Assembly
- GCA_951802695.1
- Location
- OX637849.1:17135584-17145271[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-20 5.5e-17 62.4 0.0 11 89 31 107 22 107 0.94
Sequence Information
- Coding Sequence
- ATGGAAGGAAAGAAGACTACCAGCGAAGCTCGGCGCAACCCCTTGCTCTCGGCCTCGACGTTCCTACGCGACTACTCCCCTTTGGCAGTTAACTTCGCTAAGACGGACCGGACCCCGATCAATCGGCTACCAATCATGGCGAAATCGGTGCTGGATCTGTACGAGCTGTACAATTTGGTGATCGCAAGGGGAGGCCTGGTCGACGTAATCAACAAGAAACTCTGGCAGGAAATCATCAAAGGCCTTCACCTGCCATCGAGCATCACTTCCGCGGCGTTCACTCTGCGCACCCAATACATGAAATACCTGTACCCGTACGAGTGCGAGAAGAGACGACTGTCAACGCCGGCAGAGTTGCAGGCAGCGATCGACGGAAATCGACGAGAAGGACGCCGAAGCAGCTACGGGGCGTACGCGGCCGGCGGTGGCGCGACGGCCGATGGTCTGATACAAAGAAGTCCGCACACCCCGAGTTCGCTCGCGTTGCACGCGCAAATGTCACCGCTGTCGTTGGTGACGGCGGTGGCGGCTGGTGGCCAACACCATGGTCCGCAATCGCTGGTGAACGGAAGTGCCGCGCACACGCCTCTGTCACACCACCCGCATCATCCCCAACACCCTCAGGGCCTCCCTGGACAGCCAGCGAACGCAGGCCCTATCCCAGGAATGGCACCATCCGAGTTCGAAGCACGCATGGTCGAGTACGTGAAACTGCTGAACAAGGAATTGAGAAGCGCTGGCGCCGGAACACCACCACCGATGATCCATAGACAAGGAAGCGCGTCACCACAATCCACCACGCCACCCAGAGACGGGGGATTCAGTGCCCTGGAAATGTCCAGACTCACCTTGTGGAACATGTACAACAACAACACTCTGTATCCAGGAGTTGGTCACCCGCCACCCTTGTCTCCCCAAGCGCCGCAATCGCCAGTGGCCCTTCCAGCATCGAGCCCTGAACCTCAGAGGGAGGCTCTCGATCTTGGACTCAGGTCATCGCCCATGTCCCAGTCGCCAGTCAGACAGGGTTCACCCTCTTCGGGAGGTAGTGTGCAAGTAAAGAAGGATCAAGATCTTCTCAGCATTGGACCACCGCCAATGAAGAGATCACTCTCTGACGACGAGAATCCCGCAGAGAAGGCCGCCGCTGTATCTCCCGTTGGCACGcatattaaaatttccaatCGGGGGGACGGAAGGAACGGCGACAATTCGTTGGTAGTCAGTATGGAGCTGAACGGAGTGATGTACCAAGGTGTTCTGTTCGCCCAAACTGAGAGCAAGTCCGCCAGCAGTGCAGTAACATCCAACAGCAGCATGAGAGTGTCGCGGAGCATTGTCTCGTGA
- Protein Sequence
- MEGKKTTSEARRNPLLSASTFLRDYSPLAVNFAKTDRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAAGGGATADGLIQRSPHTPSSLALHAQMSPLSLVTAVAAGGQHHGPQSLVNGSAAHTPLSHHPHHPQHPQGLPGQPANAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPQSTTPPRDGGFSALEMSRLTLWNMYNNNTLYPGVGHPPPLSPQAPQSPVALPASSPEPQREALDLGLRSSPMSQSPVRQGSPSSGGSVQVKKDQDLLSIGPPPMKRSLSDDENPAEKAAAVSPVGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTESKSASSAVTSNSSMRVSRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_01068070;
- 80% Identity
- -