Nhir011384.1
Basic Information
- Insect
- Nomada hirtipes
- Gene Symbol
- retn
- Assembly
- GCA_951802735.1
- Location
- OX637922.1:17284807-17304027[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-26 1.1e-22 80.6 0.0 2 89 43 128 42 128 0.96
Sequence Information
- Coding Sequence
- ATGCTGTCCGTCCATCCGTTCGTTTGTCCAGTTGCTCGTTTCGACGCTGCTGCAGGGGTGGATAGGATCCAGCTAGGGCGTTGCCATCGACACAGAATGCTGTACGAGATCAACGACGACCCGAAAAGAAAGGAATTCCTGGACGATCTGTTCAGTTACATGCAGAAACGTGGGACCCCGATCAATCGGCTACCAATCATGGCGAAATCGGTGCTGGATCTGTACGAGCTGTACAATTTGGTGATCGCGAGGGGAGGCCTGGTCGACGTAATCAACAAGAAACTCTGGCAGGAAATCATCAAAGGCCTCCACCTGCCATCGAGCATCACTTCCGCGGCGTTCACTCTGCGCACCCAATACATGAAATACCTGTACCCTTACGAGTGCGAGAAGAGACGACTGTCAACGCCGGCAGAGTTGCAGGCAGCGATCGACGGAAATCGACGAGAAGGACGCCGTAGCAGCTACGGGGCGTACGCGGCCGGCGGTGGCGCGACGGCCGATGGTCTGATACAAAGAAGTCCGCACGCCCCGAGTTCGCTCGCGTTGCACGCGCAAATGTCACCGCTGTCGTTGGTGACGGCCGTGGCGGCTGGTGGCCAACACCATGGTCCGCAATCGCTGGTGAACGGAAGTGCCGCGCACACGCCTCTGGCACACCACCCGCATCATCCCCAACACCCTCAGGGCCTCCCTGGACAGCCAGCGAACGCAGGACCTATCCCAGGAATGGCACCATCCGAGTTCGAAGCACGCATGGTCGAGTACGTGAAACTGCTGAACAAGGAATTGAGAAGCGCTGGCGCCGGAACACCGCCCCCGATGATCCATAGACAAGGAAGCGCGTCGCCACAATCCACCACGCCACCCAGAGACGGGGGATTCAGTGCCCTGGAAATGTCCAGACTCACCTTGTGGAACATGTACAACAACAACACTCTGTATCCAGGAGTTGGTCACCCGCCACCCCTGTCTCCCCAAGCGCCGCAATCGCCAGTGGCCCTTCCAGCATCGAGCCCTGAACCTCAGAGGGAGGCTCTCGATCTTGGACTCAGGTCATCGCCCATGTCCCAGTCGCCAGTCAGACAGGGTTCACCCTCTTCGGGAGGTAGTGTGCAAGTAAAGAAGGATCAAGATCTTCTCAGCATTGGACCACCGCCAATGAAGAGATCACTCTCGGACGACGAGAATCCCGCGGAGAAGGCCGCCGCTGTATCTCCCGTTGGCACgcatattaaaatttccaatCGGGGGGACGGAAGGAACGGCGACAATTCGTTGGTAGTCAGTATGGAGCTGAACGGAGTGATGTACCAAGGTGTTCTGTTCGCCCAAACTGAGAGCAAGTCCGCCAGCAGTGCAGTAACATCCAACAGCAGCATGAGAGTGTCGCGGAGCATTGTCTCGTGA
- Protein Sequence
- MLSVHPFVCPVARFDAAAGVDRIQLGRCHRHRMLYEINDDPKRKEFLDDLFSYMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGAYAAGGGATADGLIQRSPHAPSSLALHAQMSPLSLVTAVAAGGQHHGPQSLVNGSAAHTPLAHHPHHPQHPQGLPGQPANAGPIPGMAPSEFEARMVEYVKLLNKELRSAGAGTPPPMIHRQGSASPQSTTPPRDGGFSALEMSRLTLWNMYNNNTLYPGVGHPPPLSPQAPQSPVALPASSPEPQREALDLGLRSSPMSQSPVRQGSPSSGGSVQVKKDQDLLSIGPPPMKRSLSDDENPAEKAAAVSPVGTHIKISNRGDGRNGDNSLVVSMELNGVMYQGVLFAQTESKSASSAVTSNSSMRVSRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00253343;
- 90% Identity
- iTF_01067399; iTF_01065341; iTF_01068765; iTF_01069437; iTF_01070143;
- 80% Identity
- -