Basic Information

Insect: Nomada panzeri
Gene Symbol: -
Assembly: GCA_951802685.1
Location: OX637838.1:9692720-9696109[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00044 0.05 14.6 1.2 1 23 101 124 101 124 0.94

2 13 0.0099 1.1 10.3 4.6 2 23 251 273 251 273 0.91

3 13 0.0031 0.35 11.9 1.6 2 23 317 339 316 339 0.96

4 13 7.4 8.3e+02 1.3 7.0 3 23 424 445 423 445 0.94

5 13 0.22 24 6.1 1.5 1 19 494 512 494 517 0.89

6 13 0.0048 0.53 11.3 0.9 2 23 565 587 564 587 0.95

7 13 0.00016 0.018 16.0 0.0 2 23 610 632 610 632 0.91

8 13 0.0073 0.81 10.8 3.6 2 23 674 696 673 696 0.96

9 13 0.098 11 7.2 4.2 3 23 711 732 709 732 0.92

10 13 0.00025 0.028 15.4 0.1 2 23 777 799 777 799 0.94

11 13 0.089 9.9 7.4 0.9 1 23 879 901 879 901 0.98

12 13 0.00067 0.075 14.0 1.3 2 23 915 937 914 937 0.96

13 13 0.0064 0.72 10.9 0.8 1 23 1011 1034 1011 1034 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00044	0.05	14.6	1.2	1	23	101	124	101	124	0.94
2	13	0.0099	1.1	10.3	4.6	2	23	251	273	251	273	0.91
3	13	0.0031	0.35	11.9	1.6	2	23	317	339	316	339	0.96
4	13	7.4	8.3e+02	1.3	7.0	3	23	424	445	423	445	0.94
5	13	0.22	24	6.1	1.5	1	19	494	512	494	517	0.89
6	13	0.0048	0.53	11.3	0.9	2	23	565	587	564	587	0.95
7	13	0.00016	0.018	16.0	0.0	2	23	610	632	610	632	0.91
8	13	0.0073	0.81	10.8	3.6	2	23	674	696	673	696	0.96
9	13	0.098	11	7.2	4.2	3	23	711	732	709	732	0.92
10	13	0.00025	0.028	15.4	0.1	2	23	777	799	777	799	0.94
11	13	0.089	9.9	7.4	0.9	1	23	879	901	879	901	0.98
12	13	0.00067	0.075	14.0	1.3	2	23	915	937	914	937	0.96
13	13	0.0064	0.72	10.9	0.8	1	23	1011	1034	1011	1034	0.98

Sequence Information

Coding Sequence: ATGTCTACGACGACGGCACAAGAGGCGACGATCCCGGAATCAACGGAGTTGGACAGCGACGGATCGAGTTGCGGCGAACGCGACACCAGGAAACGTCTTCGTTTTGACACGGATTCGACGGGGCCGAAGAAGAGGCGAAAACAAACGACACCCGTTAGATTCTCCTCCACGTTAATGAGCGATGTACACGAAGACTCAAACGAGGACGAGGATGACGACGAAGACAGCGAAGGTAAGCTGTCGTTACAGTCACTCATACAAACTCAGTCGTCGATCAGAGATGAGAACCTAAATAACGAATTCCGTTGCCAGTATTGTAGTCAGTTTTTCGATAGCAAGGAAACGTTGAACGTTCACCTCGATAACGAGCACGGTTCCGCGAATCAGTTGTCGCAACAAAATAACCAAAGTAATTCTCCGAATGCCACGATCAAAACGGAACCGTCTCAGCAACTGGACCAATCAGAGAACTCTGTTAATGTACTTAGTGTAAAAAATTTCGGGATAAACTGGCTAGCCGGCGGGCAACACGTGCAATCGCACACACATATGCAGACGCAGAACGAAGAATCCTGGCCCGTCCCTCCGAATCAAATGACCGCTTTACCCAATCACTTGCAAGTGCTCTCTGGCTTTCCCGGCGCCTTGGCGCAATATTTACCTATGCCCACGTTCCCTTTAACCGAGTCTGGTTCCATTCCGAGAACCTCGTTAGGACCAACACCGATGAGAATCTTCAATCCGGACGCGTATTGCGATTTGTGTAACAAAGAATTTTGCAACAAGTATTTCCTCAAAACGCACAAAGCTAACAAGCATGGAATTTACGATTCACCTGGGCCTAGTACAGTAGATAGTAACGTACCCCCCGGGCCACTGTATCCAACTAACTTTCCTAGCAATGTGATTAAATTAGAACCGCCAAGCACTCCACCGACACCGAGCGTTACGTGCGACCTCTGCCAAAAGCGCTTCAAAAGTGACGAATTGATGCGCAAGCACAAGCAAAAGGTGCACATCGATTTACCAGAGCAGTCGCAAGAGTTGCAGCTTAACTTGTCACAGAACGAAGACGATGGGGACACGCCGAGGGACAGCCTTAGCGCCATGGAAACACTATTCAAGCAAGAGTACAACGTGGAGCAAGAGGATGCAACATTCATGCCAGCGCCCAGACATCTATCGCCTCAATCGATTCAGCAGGCACGAGATTCCGGTTTTAACGCCGATCGCCTCCGTCGTTTAGGGGTCATAAATCCAGACGCGTTCTGCGAGATATGCTGTAAAGAGTACTGTAATAAGTACTTCCTGCGAACGCATAAAATAAAGAGGCACGGTATGATCGTTCAAGACAACGATAGGTCGCCCAGTAATCCGGGATCAGCGCCCACTTGGCATCAAGTACAGACGAGCCCTCTGAATTTGATCGTGGCAGACAACGCTGGTGGCAGCGAGTCCAACGATCGGCCCGGTGAAGATTACGAGTGCAAATCGTGCGGAATACGATTTCAAACGATCGGCCTGTATCAGGCCCACTGTAGTAAGATGCACGAGGGCGAGGAACAACAGTCGCCCAAACAAGAGGGCGAATTGGAAGCGCCGGATCAACGAAACGATTCGATCTCGGAGGACCTTCAGAAGTTGCAGACCATGCTGTTGCAACTGAACGGACTCAAGCCGAGCAAGGGATTATCGTGCAACGTGTGCGGAAAAGAATGCGAGTCCAGAGCGGTTTTGCATATTCATATGGTGACGGAGCACGGCGCCGTCAACGACGATCCAATATCCTCGCCGCAAGTGAAATCTCCGTTAACCGGGAATTCCGCGGTTTGCACCTTGTGCGGCAAAGATTACGCGACCCAGGACGCCCTTAGGAGACACGTCGCCGAGGTACATCAGCCGGCaatttcaatttccgttcctcatacGCCCACTACCACCGCCACAACGACCATTTCGAATTCAACGAGCCAGACCCCAACCGAGAGGAAAGTGACGTCCATGACCCCAACGTCCAGCTACTGTGAGATATGCAACAAGGAATTGTGTAACAAGTACTTCATGAAAACGCACATGCAAAGGATGCACGGTATCGAGATCGAGAACGGAGCACAGATCGGTGGTGTGATATGCAATATCTGCAATAAAGAGCTGTGCAGCAAATACTTTTTGCGTGTGCACAAGCATAATACGCACGGCATCGTCGACGAAAATACTCCCAGCTCGGTGAAGCAGGAGAGCCACGACGCAACGAACACGGACGACTCTTCCTTGAAACCGGAACAACTCGGCGACCTTAGTCACAGATATTTCACTCACTTTACAGAGGTTTGTCCGATCTGCAGTAGGAGGTTCCGCAGCATAAAATGGTTGAAAGCGCACTTGATGGGTGATCACGGGAAAGCAGGTATCGATAAGTGGCGCGAAATGGAACAACAATATCAAACGACTGCCAAGACAGCAAACAGACCAGGTAACGTGCCGTCGAAGAATACTCAGCAGAGCTTAAATTTGAAGATACCGAACGGCTTCGAAGTAGCACAGCAATTGAAACCTATCGATTACACGGGCCTAGGTAATCAAGTGTTATCGAATTTCTTGGGCTCATCATCGGATGATCAGCAATTGAAAAGTTATCGTTGCTCCTATTGCAATTTCACCACTCCCGTGTTGCCGTTTCTCTTTCTGCACGAACGGTCCCACGCGAATTCTCGGGAGAGCGCGGAGGGCGAGAAAACGCTTCAATGTCCGATTTGCTCGCAAGGATTTCATCAACCAGAGATGCTACATCAACACTTACTCACGTCGCATCAGTTTCCCACGTTGCTGTCCCATTTTCCACCCCCTCTGCTGAATAATTTAGGATTGGACACGGAGAAACTGAACGAGGCCAAAGAGACACTAGATATAGAAACGAAAGAGGACCGAACTGAGAATAACCCTAAAGTCACTGCCAATCAGAATATTCCTGAACCAATGAAAAATCAGAAACAGGAGGACACAGCGGTCCGAGTGACTCCTCAGGGTGTGTATAAgtgcgcgcaatgcggttacGCGACGACCAATTTAAATAGGATTAAAAAACACGTGAGAAAGGATCACAAGGCGATCGGTGACCCCACTGAGACTGTAATTGCTGAACTCAGTAAAACTTTGAAGGATGTTGCCAACAAGAACAAGCTGCCAGCTTGCTACGCGATGCCGCAGGACATGAACTCGAATCCTGATAAAACGATCATGCAGCCATTTGTAATCGAAGAACAGGACACGATGCAGGCGGGCGAGGAGTCCAGCTCAGAAAAAAGATTCGCACCGGCTTTGGTTTATCTACCGGTGAAGTCACGAATTAGCAACACACTCACTGCATCGTTCACCCTCAGTCCTGCTTGA
Protein Sequence: MSTTTAQEATIPESTELDSDGSSCGERDTRKRLRFDTDSTGPKKRRKQTTPVRFSSTLMSDVHEDSNEDEDDDEDSEGKLSLQSLIQTQSSIRDENLNNEFRCQYCSQFFDSKETLNVHLDNEHGSANQLSQQNNQSNSPNATIKTEPSQQLDQSENSVNVLSVKNFGINWLAGGQHVQSHTHMQTQNEESWPVPPNQMTALPNHLQVLSGFPGALAQYLPMPTFPLTESGSIPRTSLGPTPMRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYDSPGPSTVDSNVPPGPLYPTNFPSNVIKLEPPSTPPTPSVTCDLCQKRFKSDELMRKHKQKVHIDLPEQSQELQLNLSQNEDDGDTPRDSLSAMETLFKQEYNVEQEDATFMPAPRHLSPQSIQQARDSGFNADRLRRLGVINPDAFCEICCKEYCNKYFLRTHKIKRHGMIVQDNDRSPSNPGSAPTWHQVQTSPLNLIVADNAGGSESNDRPGEDYECKSCGIRFQTIGLYQAHCSKMHEGEEQQSPKQEGELEAPDQRNDSISEDLQKLQTMLLQLNGLKPSKGLSCNVCGKECESRAVLHIHMVTEHGAVNDDPISSPQVKSPLTGNSAVCTLCGKDYATQDALRRHVAEVHQPAISISVPHTPTTTATTTISNSTSQTPTERKVTSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENTPSSVKQESHDATNTDDSSLKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLMGDHGKAGIDKWREMEQQYQTTAKTANRPGNVPSKNTQQSLNLKIPNGFEVAQQLKPIDYTGLGNQVLSNFLGSSSDDQQLKSYRCSYCNFTTPVLPFLFLHERSHANSRESAEGEKTLQCPICSQGFHQPEMLHQHLLTSHQFPTLLSHFPPPLLNNLGLDTEKLNEAKETLDIETKEDRTENNPKVTANQNIPEPMKNQKQEDTAVRVTPQGVYKCAQCGYATTNLNRIKKHVRKDHKAIGDPTETVIAELSKTLKDVANKNKLPACYAMPQDMNSNPDKTIMQPFVIEEQDTMQAGEESSSEKRFAPALVYLPVKSRISNTLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00224784;
90% Identity: iTF_01066497; iTF_01065802; iTF_01070602; iTF_01068527; iTF_01067169; iTF_01067842; iTF_01069203;
80% Identity: -