Basic Information

Insect: Nomada hirtipes
Gene Symbol: -
Assembly: GCA_951802735.1
Location: OX637922.1:8084578-8087970[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00045 0.046 14.6 1.2 1 23 101 124 101 124 0.94

2 13 0.01 1 10.3 4.6 2 23 251 273 251 273 0.91

3 13 0.0031 0.32 11.9 1.6 2 23 318 340 317 340 0.96

4 13 7.5 7.7e+02 1.3 7.0 3 23 425 446 424 446 0.94

5 13 0.22 22 6.1 1.5 1 19 495 513 495 518 0.89

6 13 0.0048 0.49 11.3 0.9 2 23 566 588 565 588 0.95

7 13 0.00026 0.026 15.4 0.1 3 23 612 633 611 633 0.91

8 13 0.0073 0.75 10.8 3.6 2 23 675 697 674 697 0.96

9 13 0.099 10 7.2 4.2 3 23 712 733 710 733 0.92

10 13 0.00025 0.026 15.4 0.1 2 23 778 800 778 800 0.94

11 13 0.089 9.2 7.4 0.9 1 23 880 902 880 902 0.98

12 13 0.00068 0.07 14.0 1.3 2 23 916 938 915 938 0.96

13 13 0.0065 0.67 10.9 0.8 1 23 1012 1035 1012 1035 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00045	0.046	14.6	1.2	1	23	101	124	101	124	0.94
2	13	0.01	1	10.3	4.6	2	23	251	273	251	273	0.91
3	13	0.0031	0.32	11.9	1.6	2	23	318	340	317	340	0.96
4	13	7.5	7.7e+02	1.3	7.0	3	23	425	446	424	446	0.94
5	13	0.22	22	6.1	1.5	1	19	495	513	495	518	0.89
6	13	0.0048	0.49	11.3	0.9	2	23	566	588	565	588	0.95
7	13	0.00026	0.026	15.4	0.1	3	23	612	633	611	633	0.91
8	13	0.0073	0.75	10.8	3.6	2	23	675	697	674	697	0.96
9	13	0.099	10	7.2	4.2	3	23	712	733	710	733	0.92
10	13	0.00025	0.026	15.4	0.1	2	23	778	800	778	800	0.94
11	13	0.089	9.2	7.4	0.9	1	23	880	902	880	902	0.98
12	13	0.00068	0.07	14.0	1.3	2	23	916	938	915	938	0.96
13	13	0.0065	0.67	10.9	0.8	1	23	1012	1035	1012	1035	0.98

Sequence Information

Coding Sequence: ATGTCTACGACGACGGCACAAGAGGCGACGATCCCGGAATCAACGGAGTTGGACAGCGACGGATCGAGTTGCGGCGAACGCGACACCAGGAAACGTCTTCGTTTTGACACGGATTCGACGGGGCCGAAGAAGAGGCGAAAACAAACGACACCCGTAAGATTCTCCTCCACGTTAATGAGCGATGTACACGAAGACTCAAACGAGGACGAGGATGACGACGAAGACAGCGAAGGTAAGCTGTCGTTACAGTCACTCATACAAACTCAGTCGTCGATCAGAGATGAGAACCTAAATAACGAATTCCGTTGCCAGTATTGTAGTCAGTTTTTCGATAGCAAGGAAACGTTGAACGTTCACCTCGATAACGAGCACGGTTCCGCGAATCAGTTGTCGCAACAAAATAACCAAAGTAATTctccgaatgccacgatcaaAACGGAACCGTCTCAGCAACTGGACCAATCAGAGAACTCTGTTAATGTACTTAGTGTAAAAAATTTCGGGATAAACTGGCTAGCCGGCGGGCAACACGTGCAATCGCACACACATATGCAGACGCAGAACGAGGAATCCTGGCCCGTCCCTCCGAATCAAATGACCGCTTTACCCAATCACTTGCAAGTGCTCTCTGGCTTTCCCGGCGCCTTGGCGCAATATTTACCTATGCCCACGTTCCCTTTAACCGAGTCTGGTTCCATTCCGAGAACCTCGTTAGGACCAACACCGATGAGAATCTTCAATCCGGACGCGTATTGCGATTTGTGTAACAAAGAATTTTGCAACAAGTATTTCCTCAAAACGCACAAAGCTAACAAGCATGGAATTTACATCGATTCGCCTGGGCCTAGTACAGTAGATAGTGACGTACCCCCCGGGCCACTGTATCCAACTAACTTTCCTAGCAACGTGATTAAATTAGAACCGCCAAGCACTCCACCGACACCGAGCGTTACGTGCGACCTCTGTCAAAAGCGCTTCAAAAGTGACGAATTGATGCGCAAGCACAAGCAAAAGGTGCACATCGATTTACCAGAGCAGTCACAAGAGTTGCAGCTTAACTTGTCACAGAACGAAGACGATGGGGACACGCCGAGGGACAGCCTTAGCGGCATGGAAACACTATTCAAGCAAGAGTACAACGTGGAGCAAGAGGATGCAACATTCATGCCAGCGCCCAGACATCTATCGCCTCAATCGATTCAGCAGGCACGAGATTCCGGTTTTAACGCCGATCGCCTCCGTCGTTTAGGGGTCATAAATCCAGACGCGTTCTGCGAGATATGCTGTAAAGAGTACTGTAATAAGTACTTCCTGCGAACGCATAAAATAAAGAGGCACGGTATGATCGTTCAAGACAACGATAGGTCGCCCAGTAATCCGGGATCAGCGCCCACTTGGCATCAAGTACAGACGAGCCCTCTGAATTTGATCGTGGCGGACAACGCTGGTGGCAGCGAGTCCAACGATCGGCCCGGTGAAGATTACGAGTGCAAATCGTGCGGAATACGATTTCAAACGATCGGCCTGTATCAGGCCCACTGTAGCAAGATGCACGAGGGCGAGGAACAGCAGTCGCCCAAACAGGAGGGCGAATTGGAAGCGCCGGATCAACGAAACGATTCGATCTCGGAGGACCTTCAGAAGTTGCAGACCATGCTGTTGCAACTGAACGGACTCAAGTCGAGCAAGGGATTATCGTGCAACGTGTGCGGAAAAGAATGCGAGTCCAGAGCGGTTTTGCATATTCATATGGTGACGGAGCACGGCGCCGTCAACGACGATCCAATATCCTCGCCGCAAGTGAAATCTCCGTTAACCGGGAATTCCGCGTTTTGCACCTTGTGCGGCAAAGATTATGCGACCCAGGACGCCCTTAGGAGACACGTCGCCGAGGTACATCAGCCGGCAATTTCAATTTCCGTTCCTCATACGCCCACTACCACCGCCACGACGACCATTTCGAATTCAACGAGCCAGACCCCAACCGAGAAGAAAGTGACGTCCATGACCCCAACGTCCAGCTACTGTGAGATATGCAACAAGGAATTGTGTAACAAGTACTTCATGAAAACGCACATGCAAAGGATGCACGGTATCGAGATCGAGAACGGAGCACAGATCGGTGGTGTGATATGCAATATCTGCAATAAAGAGCTGTGCAGCAAATACTTTTTGCGTGTGCACAAGCATAATACGCACGGCATCGTCGACGAAAATACTCCCAGCTCGGTGAAGCAGGAGAGCCACGACGCGACGAACACGGACGACTCTTCCTTGAAACCGGAACAACTCGGCGACCTTAGTCACAGATATTTCACTCATTTTACAGAGGTTTGCCCGATCTGCAGTAGGAGGTTCCGTAGCATAAAATGGTTGAAAGCGCACTTGATGGGTGATCACGGGAAAGCAGGTATCGATAAGTGGCGCGAAATGGAGCAACAATATCAAACGACTGCCAAGACAGCAAACAGACCAGGAAACGTGCCGCCGAAGAATACTCAGCAGAGCTTAAATTTGAAGATACCGAACGGCTTCGAAGTTGCACAGCAATTGAAACCTATCGATTACACGGCCCTAGGTAATCAAGTGTTATCGAATTTCTTGGGCTCATCATCGGATGATCAGCAATTGAAAAGCTATCGTTGCTCCTATTGCAATTTCACCACTCCCGTGTTACCGTTTCTCTTCCTGCACGAACGGTCCCACGCGAATTCTCGGGAGAGCGCGGAGTGCGAGAAAACGCTTCAATGTCCGATTTGCTCGCAAGGATTTCATCAACCAGAGATGCTACATCAACACTTACTCACGTCGCATCAGTTTCCCACGTTGCTGTCCCATTTTCCACCCCCCCTGCTGAATAACTTAGGATTGGACACGGAGAAACTGAACGAGGCCAAAGAGACACTAGATATAGAAACGAAAGAGGACCGAACTGAGAATAACCCTCAAGTCACCGCCAATCAGAATATTCCTGAACCAATGAAAAATCAGAAACAAGAGGACACAGCGGTCCGAGTGACTCCTCAGGGAGTGTATAAgtgcgcgcaatgcggttacGCGACGACCAATTTAAATAGGATTAAAAAACACGTGAGAAAGGATCACAAGGCGATCGGTGACCCCACCGAGACTGTAATTGCTGAACTCAGTAAAACTTTGAAGGATGTTGCCAACAAGAATAAGCTGCCAGCTTGCTACGCGATGCCGCAGGACATGAACTCGAATCCTGATAAAACGATCATGCAGCCATTTTTAATCGAAGAACAGGACACGATGCAGGCGGGCGAGGAGTCCAGCTCAGAAAAAAGATTCGCACCGGCTTTGGTTTATCTACCGGTGAAGTCACGAATTAGCAACACACTCACTGCATCGTTCACCCTAAGTCCTGCTTGA
Protein Sequence: MSTTTAQEATIPESTELDSDGSSCGERDTRKRLRFDTDSTGPKKRRKQTTPVRFSSTLMSDVHEDSNEDEDDDEDSEGKLSLQSLIQTQSSIRDENLNNEFRCQYCSQFFDSKETLNVHLDNEHGSANQLSQQNNQSNSPNATIKTEPSQQLDQSENSVNVLSVKNFGINWLAGGQHVQSHTHMQTQNEESWPVPPNQMTALPNHLQVLSGFPGALAQYLPMPTFPLTESGSIPRTSLGPTPMRIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYIDSPGPSTVDSDVPPGPLYPTNFPSNVIKLEPPSTPPTPSVTCDLCQKRFKSDELMRKHKQKVHIDLPEQSQELQLNLSQNEDDGDTPRDSLSGMETLFKQEYNVEQEDATFMPAPRHLSPQSIQQARDSGFNADRLRRLGVINPDAFCEICCKEYCNKYFLRTHKIKRHGMIVQDNDRSPSNPGSAPTWHQVQTSPLNLIVADNAGGSESNDRPGEDYECKSCGIRFQTIGLYQAHCSKMHEGEEQQSPKQEGELEAPDQRNDSISEDLQKLQTMLLQLNGLKSSKGLSCNVCGKECESRAVLHIHMVTEHGAVNDDPISSPQVKSPLTGNSAFCTLCGKDYATQDALRRHVAEVHQPAISISVPHTPTTTATTTISNSTSQTPTEKKVTSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENTPSSVKQESHDATNTDDSSLKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLMGDHGKAGIDKWREMEQQYQTTAKTANRPGNVPPKNTQQSLNLKIPNGFEVAQQLKPIDYTALGNQVLSNFLGSSSDDQQLKSYRCSYCNFTTPVLPFLFLHERSHANSRESAECEKTLQCPICSQGFHQPEMLHQHLLTSHQFPTLLSHFPPPLLNNLGLDTEKLNEAKETLDIETKEDRTENNPQVTANQNIPEPMKNQKQEDTAVRVTPQGVYKCAQCGYATTNLNRIKKHVRKDHKAIGDPTETVIAELSKTLKDVANKNKLPACYAMPQDMNSNPDKTIMQPFLIEEQDTMQAGEESSSEKRFAPALVYLPVKSRISNTLTASFTLSPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00224784;
90% Identity: iTF_01069904;
80% Identity: -