Basic Information

Insect: Nomada lathburiana
Gene Symbol: -
Assembly: GCA_963667235.1
Location: OY763905.1:6517038-6524294[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0013 0.1 13.1 0.3 2 23 175 197 174 197 0.91

2 27 0.56 43 4.9 0.3 1 23 209 232 209 232 0.95

3 27 0.062 4.8 7.9 3.5 1 23 245 268 245 268 0.93

4 27 0.00022 0.017 15.5 5.8 1 23 274 296 274 297 0.95

5 27 0.0098 0.75 10.4 0.4 3 23 304 325 302 325 0.94

6 27 0.0011 0.085 13.4 1.5 1 23 330 353 330 353 0.98

7 27 5e-07 3.8e-05 23.9 0.4 2 23 360 381 359 381 0.96

8 27 4.2e-06 0.00032 21.0 1.3 1 23 387 409 387 409 0.97

9 27 5.4e-05 0.0042 17.5 1.0 1 23 415 437 415 437 0.98

10 27 0.02 1.5 9.4 3.5 2 23 550 571 549 571 0.97

11 27 0.00028 0.022 15.2 2.7 1 23 573 596 573 596 0.96

12 27 0.0043 0.33 11.5 0.9 1 23 601 624 601 624 0.96

13 27 0.00049 0.037 14.5 2.2 1 23 630 653 630 653 0.95

14 27 0.0018 0.14 12.7 2.0 2 23 660 682 659 682 0.95

15 27 0.0067 0.51 10.9 0.3 1 23 687 709 687 709 0.96

16 27 0.0011 0.081 13.4 0.5 3 23 717 736 716 736 0.98

17 27 8.6e-06 0.00066 20.0 0.1 1 23 742 764 742 764 0.97

18 27 0.00082 0.063 13.8 0.4 1 23 770 792 770 792 0.97

19 27 0.00034 0.026 15.0 0.2 1 23 888 910 888 910 0.98

20 27 0.0071 0.55 10.8 3.4 1 23 912 935 912 935 0.94

21 27 0.02 1.6 9.4 1.0 1 23 940 963 940 963 0.95

22 27 8.8e-05 0.0068 16.8 1.3 1 23 969 992 969 992 0.96

23 27 0.0024 0.18 12.3 1.5 3 23 1000 1021 998 1021 0.95

24 27 0.0015 0.12 12.9 2.0 1 23 1026 1048 1026 1048 0.96

25 27 9e-06 0.00069 19.9 0.1 2 23 1055 1076 1054 1076 0.97

26 27 4.5e-05 0.0035 17.7 0.1 1 23 1082 1104 1082 1104 0.97

27 27 0.0015 0.11 13.0 0.4 1 23 1110 1132 1110 1132 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0013	0.1	13.1	0.3	2	23	175	197	174	197	0.91
2	27	0.56	43	4.9	0.3	1	23	209	232	209	232	0.95
3	27	0.062	4.8	7.9	3.5	1	23	245	268	245	268	0.93
4	27	0.00022	0.017	15.5	5.8	1	23	274	296	274	297	0.95
5	27	0.0098	0.75	10.4	0.4	3	23	304	325	302	325	0.94
6	27	0.0011	0.085	13.4	1.5	1	23	330	353	330	353	0.98
7	27	5e-07	3.8e-05	23.9	0.4	2	23	360	381	359	381	0.96
8	27	4.2e-06	0.00032	21.0	1.3	1	23	387	409	387	409	0.97
9	27	5.4e-05	0.0042	17.5	1.0	1	23	415	437	415	437	0.98
10	27	0.02	1.5	9.4	3.5	2	23	550	571	549	571	0.97
11	27	0.00028	0.022	15.2	2.7	1	23	573	596	573	596	0.96
12	27	0.0043	0.33	11.5	0.9	1	23	601	624	601	624	0.96
13	27	0.00049	0.037	14.5	2.2	1	23	630	653	630	653	0.95
14	27	0.0018	0.14	12.7	2.0	2	23	660	682	659	682	0.95
15	27	0.0067	0.51	10.9	0.3	1	23	687	709	687	709	0.96
16	27	0.0011	0.081	13.4	0.5	3	23	717	736	716	736	0.98
17	27	8.6e-06	0.00066	20.0	0.1	1	23	742	764	742	764	0.97
18	27	0.00082	0.063	13.8	0.4	1	23	770	792	770	792	0.97
19	27	0.00034	0.026	15.0	0.2	1	23	888	910	888	910	0.98
20	27	0.0071	0.55	10.8	3.4	1	23	912	935	912	935	0.94
21	27	0.02	1.6	9.4	1.0	1	23	940	963	940	963	0.95
22	27	8.8e-05	0.0068	16.8	1.3	1	23	969	992	969	992	0.96
23	27	0.0024	0.18	12.3	1.5	3	23	1000	1021	998	1021	0.95
24	27	0.0015	0.12	12.9	2.0	1	23	1026	1048	1026	1048	0.96
25	27	9e-06	0.00069	19.9	0.1	2	23	1055	1076	1054	1076	0.97
26	27	4.5e-05	0.0035	17.7	0.1	1	23	1082	1104	1082	1104	0.97
27	27	0.0015	0.11	13.0	0.4	1	23	1110	1132	1110	1132	0.97

Sequence Information

Coding Sequence: ATGAAGAAATGGCAGATCCTGGAATTCGATGGAAAGCCGTACTACGCGTTTGTACCTGAAGGCGACACGCCGATGGCCGACGAAGACATACCCGAGCAGATGGACGAGACGGCGAGCAAGGAAGAGAAGCAGAACAACGTCAAGGTCGAGTGTCTGTACAACGACGAGGATCTGCAGTACGATTCGTCCGACGAGAAGCTGTACGAAGAGGAGCACCTGTTAAACGGAAGCTCCGAGCAAcgggacgaggacgaggacgtgAAGCCGATTATCCTGAACGGCAGCATCGATGGCGAGAACGACAAGGCAATTGGCGACCTGTACCAGGTGAAGGTGCAGGGCAGCATGGTGACGATAGAGAAGCTGATGTCCAATGAGGACGATCAGGTTGACCGGGATCAAGATCAGGACCAGGTGGAGGAGGTGGAATACTTGGAGGAGGAGATGTTGGAGCCCGTGAACAATCATTCGACGCCAACGAAGACCCGCCGAAAGGTGTCCAGGAGCGCGGCCGGCGCGCTGAAGTGCAAGGTATGCTCGGAGATGTTCAGCTCGGCGATTTCGTTCAGGAAACACGTGGCGTGGACGCACAAGAAGAAGGTGTGCATACAGGAGGACGGCGCGTACATATGCGCGGTCTGCGACTACAGAACGTTGAAGAAGAGCCTGTTCGCCGCGCACCTGGAGAGGAAACACGAGACATGGTCACGCAAACGACCCAACAACGTGCTGTTCCCGTGTGCCGCTTGCGGGTTCGTTTGCCGATCGAAACACTCGTTGCAGTCGCACTTCATCAGAAAGCACACCGACCGGTACGAGCACCAGTGCAAATTCTGCCCGAAGAAGTTCAAAGTGAAGGGCGACCTGACGAACCACGTGCGATTTCACCATAAGGAGAAACCGATCAACTGCGACGTGTGCGGTAAATTGTGCCAGAACAGCGGCTCCCTTTACGTGCACCAGAAGTGGGCGCATTACAAGCCCAAATACGAGTGTCACATTTGCAAGAGGCGCATGGTAACGCAGGAGAACCTCGATCAACATTTGCTCACGCAGCACGAGAAGAGGGAGAAGATTGTATGCGCCGAATGCGGCAAGACGTTCACCAAGAAGGACTCGTTTAAAAGGCACATGGCTGTGCACACCGGGTGCAAGCCTCATTCCTGTCTGATATGCAACAAACCGTTCGCAAGGAGGTCACAGTTGCGCCAGCACTTGCTCATCCATACCGGGAAGAGGCCGTTCGTTTGCGATATCTGCGGCAAAGCGTTCACGCAGAAGCCCGGTCTGATTTGTCACAGGAAGACGCATCCCGGCCCTCATCCTCCGTTGCCGGTTATGCCGATCGCGGATATCGTGAAGGAATTCACGGAGGGATACGTGCAGGAGATAAACGCGAGAGAGAACGAGGAGAGAATCGAAGAGGAAGCAATCCTGGATCCCCTGAGCGAAGAATTCAAATCGGACTCCCGCTCGAACTCCCTGATAGATTTCCCCGAAGGATACATAAATTGGATCGGCAAGGAGAACTTGGATGTCGTGCACGAAAAGCAACAAGAGAACGATCTGGACAATCCGGCAGAAACAGACGCCGGACTGCGTCTGTCGGGCAACTCTAACGATCAATACAAGAGGAAAGTTCGCTTAGAATGCGACCACTGTCGACGCAAGTTCCTGAAGAAGACCAATCTGGCCGAGCACTTGAAGAAACACCGGCACAAATGCCCCGACTGTTCGAAGACGTTCCGGCTTCGTCGATACCTGTCCACCCACGTCGAGAAGATTCACCGCCGTCAGGTGTACGATTGCAGCGTTTGCGAGTACAAGAGCAACAACAAAGGCACACTGAAGAACCATTACATCCGTTTGCACACGACGAGCTACAACTTCGCCTGCGACACTTGCGGCAAGCAATTCAAAATCAAGAAAGCGTTGAACCACCACGTGAAACAGAATCACAGCGACGCACCGCCCATAGTGTGCGACGTTTGCGGTCATTTCAGTAAAAATCTGCACGCGTTGAAGGCCCACATGAAGTACAGGCACTACAAGCCCGAGTTCGTCTGTCGGATTTGTCGACGGGGTATGACCACGCAGGAAAATCTCGAGCAGCATCTAACGTGGCACGAAACGCGAGAGAAGGTGCTGTGCCCCACCTGTGGGAAGAGGTTCAGGGGTCGGGATCTTGACTCTCACATGCGGGTGCACACCGGGGTGAAACCATTTCCCTGTCCGGTTTGCGGGAAATCGTTTCGACGGCAAACCGCTCAGGAACAGCACGTATTGATTCACACGGGGAAGAGGCCGTACGTCTGCGACATTTGTGGCCAGGCGTTCGCACAGAAGCCGGGGCTGATTTGTCACAGGAAACGTCATCCTGGACCGTTGCCGCCATTGCCCGTCGTCTCGATCAAGAACATCGTGACGGAGTTCACGAAGGACTCCCCGCGAGATCCACTGAACAGCGGCGGTGCGAACCCGTTGGAGGAGCTGTGCTACATCAAGATAGAGAACTCCTATTCCCTGAACAGACGGGAGCGCAAACGGGAAAGGGACCGGATCCgaagaatgaaattgaaaatcctCGCGAATCCGTCACGGAGCCCGACAGCGTCGAAGATCCTCGAAACGATAACGCCAAAGAGAGAGACCGATCAGCTGTACGAGTGCGACTTCTGCGGCGATCAATTCGACCGGAAACCGTACCTGGTGGCCCACATGAAGATACACAAGCACCGTTGCAGGACCTGCGATCAAACGTTCAAGCTGCGGAAAGACTTGAAGCTGCACACGCTGCAGGCCCACGGACCGGTGTTGTATCCGTGCACCATATGCGAGTACAAGAGCAACAACAGATGGACGCTGAAGGACCATTTCATCAGGAAGCACACGAGCAGCTTCGAGTACTCGTGCACGATCTGCGGGAAGCAGTTCAAAATCAAGAACGACCTGCTGCAGCACACGAAACAGATGCACAGCAACGCGCCGCCAATTATTTGCACCGTCTGCGGTCATGCTTGCAAGAGCGTGCCCTCGTTGAAGGCGCACATGAAGTACAGACACTACAAGCCCGCGTACGAGTGCAGCATATGCAAGCGTTGCATGACGACGCAGAAGAACCTCGAGCTGCACACGATATGGCATCAGACGAAGGAGAAAGTGGTTTGCCCGACATGCGGCAAGACCTTCGGTCAGAAGAGGGATCTGGATCTTCATTTGAGGATCCACGAGGGTATCAGGCCGTTCGCCTGTCCGGTTTGCGGGAAGAAATTTCCAAGGAGGACCGCCCAGGAACAGCACATACTGATACACACGGGACAACGGCCGTACATTTGTGATATATGCGGGCAGGCGTTTGCACAGAAGCCGGGTTTGATCTGCCACCGGAAGCGTCATCCTGGACCCCTGCCGCCGCTGCCTGTGGTCTCCATTAAGAAGATCATCGCGGACTTCACTCAGGGATtgaacgacgcgacgacggAGAAGAAGGAGAATTGA
Protein Sequence: MKKWQILEFDGKPYYAFVPEGDTPMADEDIPEQMDETASKEEKQNNVKVECLYNDEDLQYDSSDEKLYEEEHLLNGSSEQRDEDEDVKPIILNGSIDGENDKAIGDLYQVKVQGSMVTIEKLMSNEDDQVDRDQDQDQVEEVEYLEEEMLEPVNNHSTPTKTRRKVSRSAAGALKCKVCSEMFSSAISFRKHVAWTHKKKVCIQEDGAYICAVCDYRTLKKSLFAAHLERKHETWSRKRPNNVLFPCAACGFVCRSKHSLQSHFIRKHTDRYEHQCKFCPKKFKVKGDLTNHVRFHHKEKPINCDVCGKLCQNSGSLYVHQKWAHYKPKYECHICKRRMVTQENLDQHLLTQHEKREKIVCAECGKTFTKKDSFKRHMAVHTGCKPHSCLICNKPFARRSQLRQHLLIHTGKRPFVCDICGKAFTQKPGLICHRKTHPGPHPPLPVMPIADIVKEFTEGYVQEINARENEERIEEEAILDPLSEEFKSDSRSNSLIDFPEGYINWIGKENLDVVHEKQQENDLDNPAETDAGLRLSGNSNDQYKRKVRLECDHCRRKFLKKTNLAEHLKKHRHKCPDCSKTFRLRRYLSTHVEKIHRRQVYDCSVCEYKSNNKGTLKNHYIRLHTTSYNFACDTCGKQFKIKKALNHHVKQNHSDAPPIVCDVCGHFSKNLHALKAHMKYRHYKPEFVCRICRRGMTTQENLEQHLTWHETREKVLCPTCGKRFRGRDLDSHMRVHTGVKPFPCPVCGKSFRRQTAQEQHVLIHTGKRPYVCDICGQAFAQKPGLICHRKRHPGPLPPLPVVSIKNIVTEFTKDSPRDPLNSGGANPLEELCYIKIENSYSLNRRERKRERDRIRRMKLKILANPSRSPTASKILETITPKRETDQLYECDFCGDQFDRKPYLVAHMKIHKHRCRTCDQTFKLRKDLKLHTLQAHGPVLYPCTICEYKSNNRWTLKDHFIRKHTSSFEYSCTICGKQFKIKNDLLQHTKQMHSNAPPIICTVCGHACKSVPSLKAHMKYRHYKPAYECSICKRCMTTQKNLELHTIWHQTKEKVVCPTCGKTFGQKRDLDLHLRIHEGIRPFACPVCGKKFPRRTAQEQHILIHTGQRPYICDICGQAFAQKPGLICHRKRHPGPLPPLPVVSIKKIIADFTQGLNDATTEKKEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00220718;
90% Identity: iTF_01067746;
80% Identity: -