Nhir001800.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nomada hirtipes
Gene Symbol
Hr39
Assembly
GCA_951802735.1
Location
OX637916.1:14958993-14964235[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.64 3.8e+03 -2.7 4.9 115 153 39 79 17 105 0.50
2 5 2.5 1.5e+04 -4.6 9.9 54 163 296 406 284 442 0.59
3 5 4 2.4e+04 -7.6 11.3 70 160 441 531 414 548 0.49
4 5 2.1e-08 0.00013 22.0 0.1 1 28 614 641 614 694 0.73
5 5 7.2e-70 4.3e-66 224.4 0.0 194 408 781 990 762 990 0.94

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCTGGCCCAGGCCCAGGTCCTGGCTGGTGGCCAGCCTCGCAGTCCTGGAAGACGAACTCCTGCAGCGCCGGCTCCACGTCCGCCACGTCCGCTAGTTCCGTCAGTTCCGCCGCTCCAGACAACTCCGCCTCCGTCTCTTCGTCCTGCACCACCTCTACCTCCTCCTCTTTGGCGACCACAACTTCGGCCACTTCTTCGACCAGTTGCTATACCTCGACCCCTGGCGGACCGTCGTGCACGATCACCGCGGCCCGTTCCTGCGAGACAGGAAAGAATGTCTCTGTCACGACGATCAGTGTCCCACCTAACCAGGATATACACGACGGGAAGGGTATATGCAAGTATCTTGCCGGCCAAAATGGCGTGACGGTATCCGTAGTCTCCAACTGTGGCTCGGTATTAGGTTGTGGAAACGCCAATGTCGTGTCCACCACGGGAATCGGAACCAACACCGGATCGCAGAGTATCGGTATCGGCATCGGAGTCAATGTCCTGACCCAGAACACCGCGGATGACGACGCAGAGGACAGTGACGTCGAGATCAGCAAAATCGACTTCCGAGGGGTGAATTTGCgcacaaaaaagaaacgagactTGTCGGGTAGCCAAAGCGGGGAAAAAATCGGCGATAGGGACACCGAGGATGGGAATGGTTGTTACGATGGGAACGACGTGTCCCAGCAGCAACCAGAAAGACCGATGTCATGGGAAGGGGAACTATCTGACCAAGAAATGTCCTCTAATACAATTACGAATCAAGATACGCATGAAGATACGTCAATGGAGGGAGTTCAAGTATGTGGCGCAAGTCCTGGGCCAGTGGAACAGAAATTTCCAATAAAGACGGAACCAGACTTTCAATCTAGCCCGGGATTCGCATTTGCTTCTTTCCACGAGGCCGGATTACCTTTGGCGCATGGCCAACAAATGccacagcagcagcaacagcagcaacacaATATTGAAAATCTGGAACAGACTCAACAAAATGATTTGCCTCTTCTCGTAGGAAAACTACTTGGTGGTTACAATAGTTCTACTCCAAACCATAGCCCAGTGTTAAATCCAAGACATCATCTGACAAAGCATAGCCATACGAGATCGCAGGTCCCATCGCCGGACTCAGCGATTCATTCCGCATACAGCGTGTTCAGCTCGCCGACGCAAAGTCCCCATGCAGCTCGTCACTCCGCGTTAGGCGCAGGAAGCCCGGTTCCATCCTCGTCGTTATCCCTCTCGCGGCACAGCTTCAACAATTCGACGTCCTCGTTGTCGTTGTCGCTGTCACACTCCCTCTCGAGGAACAATTCCGATGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTTAGTCCACCCACGCATTCACCCGTCCAGCAACCAAGGCATCCGCAACATCATCAGCACCAGGTGACTCAAGGAAGTCCTCTTCATCTGCCCACAACAGCCTCCCCCGCCATTGCACACCATTACACTTCCTCTGCACCGGGTTCTGAGCTGTCACCGGAAGGACACCCCACCACAGACGACCAGGAAGATTGTCGAATACCATCAGCGCCTTCTGGTATTTCTACTAGGCAGCAACTAATCAATAGCCCATGTCCAATTTGCGGAGACAAGATCAGTGGTTTTCATTACGGAATCTTCTCGTGCGAGTCGTGCAAGGGATTTTTTAAACGCACCGTCCAGAATCGAAAGAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCGGTCACTGTTGCTACCAGGAAGAAATGCCCCGCCTGCCGCTTTGACAAGTGCCTCAATATGGGTATGAAGCTGGAGGCAATCAGAGAGGATCGCACCAGAGGTGGACGAAGTACGTATCAATGTACGTACACTCTTCCAGCAAGTCTGGTAGGTAGTCCTGCGAGCAGCATGGCCAGTGACAAGTTAGCCACTAGTGGAAACTGTAGTCCAGCCCCAGCCGGCAGTGAGCATCACTATACAGCCAGGCACCACTCAAATCACTCTCATAAGATTCAGGTGGTGCCGCAACTACTGCAGGATATCATGGATGTGGAGCACTTGTGGCATTACAATGATAACGATCGTATGTCCGGGGTTCAAGCTGGAGGAGCAAACGCTGGGAGAAACAATGATATGTTACTTGGAGCCGGAAACAGGGGAGGTTCCGGAACAGGAAGTGATACATGTCCAGGTGTCGAATGTTCCTCCAACGGAACCGCGGGAAACGGGAATCCTAGTAACAGAAGAGACGACAGGTCGTGCTCTAACGTTACTACAGTGGGCAACGAACAACGTGCTGCGCCCATTAACAGCAGCCCCCAAATCAGTAATACGAACGGTAACCCCACGCAGCATCCTGATTTTCTGTCGAACCTCTGCAACATCGCTGACCACCGACTCTATAAAATAGTGAAATGGTGCAAGAGTTTACCGTTGTTTAAGAACATTTCCATCGACGATCAGATATGCCTGTTAATCAACTCCTGGTGCGAGCTGTTGCTCTTCTCGTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACATTAGAACAGGCTAGACAGCTTGGTTTGGCGACCTGCATCGAGAGGATGCTCGCCTTTACTAATAATCTGAGAAGGCTTCGAGTAGATCAGTACGAATACGTGGCTATGAAGGTAATAGTACTGTTGACCTCTGATACGAGTGAATTGAAGGAACCTGAAAAAGTTCGAGCATCTCAGGAAAAGGCTTTACAAGCATTGCAACAGTATACCATAGCAAGGTACCCGGAAATGCCTGCCAAGTTTGGTGAATTGCTATTGAGAATTCCGGATTTGCAAAGGACATGCCAAGCAGGAAAGGAATTGTTAAGCGCGAAACGTGCTGAAGGAGAAGGCAGCTCATTCAATTTGTTGATGGAATTATTGAGAGGGGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGPGPGWWPASQSWKTNSCSAGSTSATSASSVSSAAPDNSASVSSSCTTSTSSSLATTTSATSSTSCYTSTPGGPSCTITAARSCETGKNVSVTTISVPPNQDIHDGKGICKYLAGQNGVTVSVVSNCGSVLGCGNANVVSTTGIGTNTGSQSIGIGIGVNVLTQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDLSGSQSGEKIGDRDTEDGNGCYDGNDVSQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGASPGPVEQKFPIKTEPDFQSSPGFAFASFHEAGLPLAHGQQMPQQQQQQQHNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVTQGSPLHLPTTASPAIAHHYTSSAPGSELSPEGHPTTDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASSMASDKLATSGNCSPAPAGSEHHYTARHHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRMSGVQAGGANAGRNNDMLLGAGNRGGSGTGSDTCPGVECSSNGTAGNGNPSNRRDDRSCSNVTTVGNEQRAAPINSSPQISNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733987;
90% Identity
iTF_01539632;
80% Identity
iTF_01068354;