Ngoo001058.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nomada goodeniana
Gene Symbol
Hr39
Assembly
GCA_963969485.1
Location
OZ018299.1:13344584-13349738[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.45 1.9e+03 -2.2 4.2 116 160 40 78 17 106 0.52
2 5 0.22 9.3e+02 -1.2 8.1 51 163 292 405 277 424 0.75
3 5 4 1.7e+04 -7.0 9.6 71 143 441 513 412 546 0.46
4 5 2.9e-08 0.00012 21.5 0.1 1 25 613 637 613 683 0.81
5 5 6.8e-70 2.9e-66 224.5 0.0 192 408 778 989 756 989 0.94

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCTGGCCCAGGCCCAGGTCCTGGCTGGTGGCCAGCCTCGCAGTCCTGGAAAACGAACTCCTGCACCGCCGCCTCCACGTCCGCCAGTTCCGCTAGTTCCGTCAGTTCCGCCGCCCCAGACAACTCCGCCTCCGTCTCTTCGCCCTGCACCACCTCTACCTCCTCCTTGGCGACCACAACTTCGGCCACTTCTTCGACCAGTTGCTGTACCTCGACCCCTGGCGGACCGTCGTGCACGATCACCGCGGCCCGTTCCTGCGAGACAGGAAAGAATGTCTCTGTCACGACGATCAGTGTCCCACCTAACCAGGATATACACGATGGGAAGGGTATATGCAAGTATCTTGCCGGCCAAAATGGCGTGACGGTGTCCGTAGTCTCGAACTGCGGCTCGGTATTAGGTTGTGGAAACGCCAATGTCGTGTCCACCACGGGAATCGGAACCAACACCGGATCGCAGAGTATCGGTATCGGCATCGGAGTCAATGTCCTGACCCAGAACACCGCGGATGACGACGCAGAGGACAGCGACGTGGAGATCAGCAAAATCGACTTCCGAGGGGTGAATTTGCgcacaaaaaagaaacgggactTGTCGGGTGGCCAGAGCGGAGAAAAAATCGGCGATAGGGACACCGATGATGGAAATGGTTGTTACGATGGGAACGACGTGTCCCAGCAGCAACCAGAAAGACCGATGTCATGGGAAGGAGAACTATCTGACCAAGAAATGTCCTCCAATACAATTACGAATCAAGATACGCATGAAGATACATCAATGGAGGGAGTTCAAGTATGTGGCGCAAGTCCTGGGCCCGTTGAACAGAAATTTCCAATAAAGACGGAACCAGACTTCCAATCTAGCCCGGGATTCGCATTTGCTTCTTTCCACGAGGCCGGATTACCTTTGACACATGGCCAACAAATGccacagcagcagcaacagcagcaacacaATATTGAAAGTCTGGAACAGACTCAACAAAATGATTTGCCACTTCTCGTAGGAAAGTTACTTGGTGGTTACAATAGTTCAACTCCAAACCATAGCCCAGTGTTAAATCCAAGACATCATCTGACAAAGCATAGCCATACGAGATCGCAGGTCCCATCGCCGGACTCAGCGATTCATTCCGCATACAGCGTGTTCAGCTCGCCGACGCAAAGTCCCCATGCAGCTCGTCACTCCGCGTTAGGCGCAGGAAGCCCGGTTCCATCCTCGTCGTTATCCCTCTCGCGGCACAGCTTCAACAATTCGACGTCCTCGTTATCGTTGTCGCTGTCACACTCCCTATCGAGGAACAATTCCGATGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTTAGTCCACCCACGCATTCACCCGTCCAGCAACCAAGGCATCCGCAGCATCATCAGCACCAGGTGACTCAAGGAAGTCCTCTTCATCTGCCCACAACAGCCTCCCCCGCCATTGCACACCATTACACATCCTCTGCACCGGGTTCTGAGCTATCACCGGAAGGACACGCCGTCACAGACGATCAGGAAGACTGTCGAATACCATCGGCGCCTTCTGGTATTTCTACTAGGCAGCAACTAATCAATAGCCCGTGTCCAATTTGCGGCGACAAGATCAGTGGTTTTCATTACGGAATATTCTCGTGCGAGTCGTGCAAGGGATTTTTCAAACGCACCGTCCAGAATCGAAAGAATTATGTGTGCCTTAGAGGCGCGGGCTGTCCGGTCACTGTTGCTACCAGGAAGAAATGCCCCGCCTGCCGCTTTGACAAGTGCCTCAATATGGGTATGAAGCTTGAGGCAATCAGGGAGGATCGCACCAGAGGTGGACGAAGTACGTATCAATGTACGTACACTCTTCCAGCAAGTCTGGTAGGTAGTCCTGCGAGCAGCATGGCCAGTGACAAGTTAGCCACTGGTGGAAACTGTAGTCCAGCCCCAGCTGGCAGTGAGCATCACTATACAGCCAGGCACCACTCAAATCACTCTCATAAGATTCAGGTGGTGCCGCAACTACTGCAGGATATCATGGATGTGGAGCACTTGTGGCATTACAATGATAACGATCGTATGTCCGGGGTTCAAGCTGGAGGACCAAACGCTGGGAGAAACAATGATATGTTACTTGGATCCGGAAACAGGGGTGGTTCTGGAACAGGAAGTGATACATGTCCAGGTGTCGAATGTTCCTCCAACGGAACCGCGGGAAACGGGAATCCTAGTAACAGAAGAGACGACAGGTCGTGCTCTAACGTTACTACAGTGGGCAACGAACAACGTGCTGCGCCCATTAACAGCAGCCCACAAATCAGTAATACGAATGGTAACCCCACGCAGCATCCTGACTTTCTGTCGAACCTCTGCAACATCGCTGACCACCGACTCTATAAAATAGTGAAATGGTGCAAGAGTTTACCGTTGTTTAAGAACATTTCCATCGACGATCAGATATGCCTGCTAATCAACTCCTGGTGCGAGCTGTTGCTCTTTTCGTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACATTAGAACAGGCTAGACAGCTTGGTTTGGCGACCTGCATCGAGAGGATGCTCGCTTTTACTAATAACCTGAGAAGGCTTCGAGTAGATCAGTACGAATACGTGGCTATGAAGGTAATAGTGCTGTTGACCTCTGATACGAGTGAATTGAAGGAACCTGAAAAAGTTCGAGCATCTCAGGAAAAGGCTTTACAAGCATTGCAACAGTATACCATAGCAAGGTACCCGGAAATGCCTGCCAAGTTTGGTGAATTGCTATTGAGAATTCCGGATTTGCAAAGAACATGTCAGGCAGGAAAGGAATTGTTAAGCGCGAAACGTGCTGAAGGAGAAGGCAGCTCATTCAATTTGTTGATGGAATTATTGAGAGGGGATCACTGA
Protein Sequence
MSEQNGPSEGPGPGPGPGPGWWPASQSWKTNSCTAASTSASSASSVSSAAPDNSASVSSPCTTSTSSLATTTSATSSTSCCTSTPGGPSCTITAARSCETGKNVSVTTISVPPNQDIHDGKGICKYLAGQNGVTVSVVSNCGSVLGCGNANVVSTTGIGTNTGSQSIGIGIGVNVLTQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDLSGGQSGEKIGDRDTDDGNGCYDGNDVSQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGASPGPVEQKFPIKTEPDFQSSPGFAFASFHEAGLPLTHGQQMPQQQQQQQHNIESLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVTQGSPLHLPTTASPAIAHHYTSSAPGSELSPEGHAVTDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASSMASDKLATGGNCSPAPAGSEHHYTARHHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRMSGVQAGGPNAGRNNDMLLGSGNRGGSGTGSDTCPGVECSSNGTAGNGNPSNRRDDRSCSNVTTVGNEQRAAPINSSPQISNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733987;
90% Identity
iTF_01539632;
80% Identity
iTF_01067669; iTF_01067639;