Ngoo008512.1
Basic Information
- Insect
- Nomada goodeniana
- Gene Symbol
- lilli
- Assembly
- GCA_963969485.1
- Location
- OZ018303.1:17762671-17775615[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0014 24 3.9 13.1 44 126 12 97 9 111 0.51 2 2 2e-09 3.3e-05 23.2 0.2 327 381 175 230 165 244 0.80
Sequence Information
- Coding Sequence
- ATGGTGTGCGAACTGGTGAATCCAGATGCCCGCGACAGTACGACGCAGCAAATTCAATCGAAACTGGGCAACTATTCTCTGGTGAAGCATCTCCTGGACGAGCCTAAACGGCTGATCGGCATCGAGGGTGTACCGCCGAGTCCAGCCCCGTCCCCGTCACCCTCGTCCCTACGAACGAGTTCCAGTTCGGTCGGCTCGAATTCCAGGAGCTCGCCCTCCTCCCAAGAATTCAAGAAACCCGGAGGACTGAGGACCGGTGgctcgtcttcgtcgtcgtcctcgtcgtcgtcgggccaccagcgcGGCGGTTTCGTGAAACCAGCCGACGGGAAGCCACCGTACGGAGGCAGGGGTGGTTATCCTGGCCAGCCGGTGAAGCACGGGGGCAACAGCAACGATCATCGAAGCCACGGTTTATTACCCGCCAAAGGGCCGCCCCCGAATTCACCCGGGAACGGAACGCTCGTTGGCAATTCGAATATCGGAAATTCCAGCGGCGGCAGACTTCACTGTGCCGGCAGCCGGCTGTCCAGGTTGCCTCTCGATAACGGAACGAGCTCGAGGCCCGGCCCCACCGAGAATTCGGCCGATGTGGAGAACATTTTAAAGGAAATGACCATGCCGCCCACACCACTGACGGCCATCGCTCAGACACCGAGGAAGGAGCTCGAGTCGAAGTTCACGTTCAATCCTGTGCTGGCTAAGTTGACCGAAGTGACGCCGCAGGAAGCACCGAAGCCTCGTAAGTAA
- Protein Sequence
- MVCELVNPDARDSTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPPSPAPSPSPSSLRTSSSSVGSNSRSSPSSQEFKKPGGLRTGGSSSSSSSSSSGHQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPPNSPGNGTLVGNSNIGNSSGGRLHCAGSRLSRLPLDNGTSSRPGPTENSADVENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVTPQEAPKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00088814;
- 90% Identity
- iTF_01069659;
- 80% Identity
- -