Ngoo012526.1
Basic Information
- Insect
- Nomada goodeniana
- Gene Symbol
- SNAPC4
- Assembly
- GCA_963969485.1
- Location
- OZ018305.1:22799150-22801639[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.52 4.2e+02 1.1 0.0 12 43 195 234 190 237 0.79 2 5 6.1e-11 4.9e-08 32.9 1.3 1 45 243 289 243 290 0.95 3 5 1.4e-07 0.00011 22.1 2.2 3 43 299 343 297 346 0.96 4 5 2.1e-13 1.7e-10 40.7 0.0 1 46 352 398 352 398 0.97 5 5 3.9e-09 3.1e-06 27.1 0.1 4 41 408 445 406 446 0.96
Sequence Information
- Coding Sequence
- ATGAACACTCTAAACAATATTGATAATGATGAGGCcgaaatattgttattcgAAAGCATAGTGTGTCCTGagtatgaaaatgtaaatcatTTTGTAAATGCTTTTGATACAAGCAGACTGGATAATGAATATCAGAGTGACAATGTCTTTGCCGAATGTAACGTCGTGAATTGTAATAAGTTGCTGAAtttgaacaagaaaataacCTCTTCCTTGTTAGATCTAAAAAGGCGCATAACCTTTGCTCTTGAAAAAtgtgaacgaaaattgacAGCAATAGACAGAGGTTTGCAAACTCATACGGCTGGAGACACAAAGGTGTTAATTTGTAACGCTAGTATGCCATACTTTAAAGATAGAAATTACTTTTTCGCCTCCAGTAATGAAGATGATATTTTAAAAGAGAAGCGTAAAGAGTTGCAGGTGCGAAATCTTTTAAAAGTTTCCCCTTGGTCAAGAAAGGATCGGAACACCCTTCTTAAATCCATACGACAGCAAGTCTTTGCGGACCAATTATGTTCAAATAATGTAGAATGCACAAGAATTGTGAAAGATAGAGAGGAAATAGAGAAACAGCTTCCATTTAAAGACTTTGTCGAAATGGTTGGCCCTCTGCAGAAAAGAGAGTTTGATTGGTTCAAAATATCTTCCACTCATTTTGAAGATGCACATTCTCCACTCGATTGTAGAGTAATGTGGAACGTTTTTCTACATCCAAGTATTAATAAAGAATGTTGGGCAAAATCAGAGGACACGAAACTAAAAGAAATTGCACAAAAACATAAATTCCAAAACTGGGACAGAATTGCTaaagaattaaatacaaaGCGCACTGCTTACCAGTGTTTCGTAAGATACAATACAACAAAGAAATTgcctaaaataaaaaattgcaactGGAAAAGAGAGGAAGATAAACGGCTTTTGAAActgatagaaatatttaagatCGGCGACTTCATTCCTTGGGGTGAAATAGCTAGTTGGATGTGGAATAGAACTAAACAACAAGTTTATTTTAGATGGACGTATAGTTTAGCAccgtatttaataaaaggcAGATTCACTAAAGTCGAGGATGAGGTTCTCAGGGATGCTGTTATTAAGTATGGTACTAATTTTCGTAAGATATCAGCTGCATTGATGCCTAATAGATCCACTGTACAACTTCATGATCGTTATCAAACATTACTCACCAATCAAATAGAGAACTGGAATTTATGGACCCTCTCAGAAGACAGCAAGTTGCTCGACCTTTACAATTGTCTCGGTTCCAATTGGTCTGCCATAGCTAAGAATTTTTCGTGCAAAACTAGAACACAATTAAGACATCGGCATGCAGCTTTGCAAAAATACATTAAAAGAGGTGTTTCCCTAAATGAGCTACACAAAACTCGTCTACCTAATGGAGAAGGTGAAAACCAGCAAACAGATGTGGCAGGGGCACCTAGATGGGATGCTTCTAAATCTTGTAATGATACAAATGATACAGATTATTACAGTGATATAGACAAAGAATTGATCGAATACTTTCATacggaacgaaaaaaaaaaatattcatccaGGAACAGAAACATTTGAATCttgttgaaaatttaaaacaTAACGTAACAAGTTTATATAACATTTTACAAGGATTGAATGCAAAACTTTCTATCCCTGATGACATTAGCAATTTAAAGCTAGAAAGTGCAGACatgcaattattatacttattaaaaaaatatatgggCAAGAAGGATGATAAGgaacattatattaaatttataaataaatatagattgTGCATGTTTAATAAAAGCACAGGTATGGAAGAGTGTTCTCACTTTGAACCTCCACCACCATTTCAGTTGCAAAAGGAAGTAAGgaaatcaaagaaaaatttgtgTATCGATTACACTTTAAATACAAAGAATAAATTTCTGCTGGAACAGCCTGTAGACTTTGATACTCCTGAGCTTATAATTTCTCACATTGGGGGTAATGAAGAAGAATTACAATTCCAAAAGCTTAGTAATTTCCTTCATGTTGACTGTCATAAAATATCATGTATACAAACTATCAAAGAAGTGAATAATCTCTTTCGTGAGCATGAAGATGTGGATGCTTCATCGGTATTAGGCATTGAGATCCCTCAACAACCTAATATGTGTGCTACAGATACCAATCATGCGACTTTATTATgcttaaaaaatttattgtatttgaaACGATTGAATGAAAGTTTAAATAAGAAACCCCATCAATGTCTTTTAAGCTCAGTTAAGTATCGGGATGCGTTCAATCTACTCTGCATACGTCTccaacaattgtttaaatatccAATAGGCTTATCAAATATAACATTGCCTGAGGTTTATGCAATAGATACATTCTCATATGAAGATGGTATTAGCAAGAGAAAAATTTCTAACACTGCAGACATAATTGAAGAgcgcaaaacaaaaaaaaaacgaccgATAAAGAAAAGTTACGAAATCGTGAGATGA
- Protein Sequence
- MNTLNNIDNDEAEILLFESIVCPEYENVNHFVNAFDTSRLDNEYQSDNVFAECNVVNCNKLLNLNKKITSSLLDLKRRITFALEKCERKLTAIDRGLQTHTAGDTKVLICNASMPYFKDRNYFFASSNEDDILKEKRKELQVRNLLKVSPWSRKDRNTLLKSIRQQVFADQLCSNNVECTRIVKDREEIEKQLPFKDFVEMVGPLQKREFDWFKISSTHFEDAHSPLDCRVMWNVFLHPSINKECWAKSEDTKLKEIAQKHKFQNWDRIAKELNTKRTAYQCFVRYNTTKKLPKIKNCNWKREEDKRLLKLIEIFKIGDFIPWGEIASWMWNRTKQQVYFRWTYSLAPYLIKGRFTKVEDEVLRDAVIKYGTNFRKISAALMPNRSTVQLHDRYQTLLTNQIENWNLWTLSEDSKLLDLYNCLGSNWSAIAKNFSCKTRTQLRHRHAALQKYIKRGVSLNELHKTRLPNGEGENQQTDVAGAPRWDASKSCNDTNDTDYYSDIDKELIEYFHTERKKKIFIQEQKHLNLVENLKHNVTSLYNILQGLNAKLSIPDDISNLKLESADMQLLYLLKKYMGKKDDKEHYIKFINKYRLCMFNKSTGMEECSHFEPPPPFQLQKEVRKSKKNLCIDYTLNTKNKFLLEQPVDFDTPELIISHIGGNEEELQFQKLSNFLHVDCHKISCIQTIKEVNNLFREHEDVDASSVLGIEIPQQPNMCATDTNHATLLCLKNLLYLKRLNESLNKKPHQCLLSSVKYRDAFNLLCIRLQQLFKYPIGLSNITLPEVYAIDTFSYEDGISKRKISNTADIIEERKTKKKRPIKKSYEIVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01066180; iTF_01068900; iTF_01066866; iTF_01070290; iTF_01069587; iTF_01065495; iTF_01068222;
- 90% Identity
- iTF_01068900; iTF_01066180; iTF_01066866; iTF_01070290; iTF_01069587; iTF_01068222;
- 80% Identity
- -