Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_907165295.1
Location
OU015689.1:26126259-26128778[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.18 2e+02 2.3 0.0 12 43 205 244 199 247 0.75
2 5 1.3e-11 1.4e-08 34.8 1.3 1 45 253 299 253 300 0.95
3 5 7e-07 0.00077 19.7 2.1 3 43 309 353 307 356 0.96
4 5 2.2e-12 2.4e-09 37.3 0.0 1 46 362 408 362 408 0.94
5 5 2.9e-10 3.2e-07 30.5 0.1 4 41 418 455 416 456 0.97

Sequence Information

Coding Sequence
ATGAACACTCTAAACAATATTGATAATGACGAGGCCGGAATATTGTTATTCGAAAGTATAGTGTGTCCTGAGTATGAAAATGTAAATCATTGTGTAAATCCTTTTGACACAAGCAGACTGGATGATGAACATCAGAGTAAGAATGTCTTTGCCGAATGTAACGTCGTAAATTGTAATAGGTTGCTGAATTCGAACAAGGAAATAACCTCTTCGTTGTTAGACCTAAAAAGGCGCATAACGTTTGCTCTTGAAAAATGTGAACGAAAATTGACAGCAATAGACAGACGTTTGCAAACACATACAGCTGGAGAGTCAAAGGTTTTAATTTGTAACGCTAGTATGCCATACTTTAAAGATAGAAATTACTTTTTTGCCTCCAGTAATGAAGATGAAATTTTAAAAGAGAAGCGTAAAGAGTTGCAGGTCCAAAACCTTTTAAAAGTCACCCCATGGTCAAGAAACGATCGGGACACCTTTATTAAATCCATGAAAAAGCAACTCAAACAGGACAAATTATATAAAGATAAGTTAGAACGCATAAGAATTAATAACGCAACGCAGAATTTGTATTCAGATGTAAAAGATATAGAGGAAACAGAGAAACAGCTTTCATTGGAAGACTTTGTCAAAATGGTCGGCCATCTGCACGAAAGAGAGTTCGATTGGTTCAAAATATCTTCCACTCATTTTGAAGATGCACATTCTCCGCATGATTGTAGAGTAATGTGGAACGTTTTTCTACATCCAAGTATCAGTAAAGAGTGTTGGACAAAATCAGAGGACACGAAATTGAAAAAAACTGCACAAGAATATAAATTTCGAAACTGGGACGAAATTGCTAGAGAACTAAATACAAAGCGAACTGCTTACCAATGTTTCATAAGATACAATACAACAAAGAAAATGCCTAAAATAAAAAATTGCAACTGGAAAAGGAAGGAAGATAAAAGGCTTTTGAAACTGATAGAAATATTTAAGATCGGCGATTTCATTCCCTGGGGTGAAATAGCTAGTTGGATGTGGAATAGAACCAAACAACAAGTTTATTTTAGATGGATGTATAGTTTAGCACCGTATTTAATAAAGGGCAGATTCACTAAAGTCGAAGATAATATTCTCACGGATGCTGTTATTAAGTATGGTACTAATTTTCATAAGATATCAACTGCACTGATGCCTAATAGATCCACTGTTCAACTTCATGATCGTTATCAAACGTTACTCACCAATCAAATTGAGAACTGGAATTTATGGACGTTCTCAGACGACAGCAAGTTGCTGGACCTTTACAATTGTCTCGGTTCCAATTGGTCCGCCATAGCTAAGAAGTTTTCGGGCAAAACTAGAACACAACTAAGACATCGGCATGCAGCTTTGCAAAAATACATTAAAAGAGGTGTTTCTCTAAATGAGATACACAAAAGTCATCTACCTAATGGAGGATGTGGAAACCAGCAAACAGATGTGGCAGGTACACCTAGCTGGGATGCTTTAAAATCTTCTGACAATGCAAAAGATACAGATCATTACAGTGATATAGATAAAGAATTGATTGAATACTTTCATACGGAACGAAAGAACGAAATGTTCGTCCAAGAGCAGAAATATTTGAATCTTGTTGAAAATTTAAAACATAATGTAACAAGTTTATACAACATTTTACAAGGATTGAATGCAAAACTTTCTATCCCTGATGACATTAGCAATTCAAACGTAGAAAATGTAGACATTCAATTATTATACTTATTAAGAACATATTTGAGCAAGAAAGATGATAAGGAACATTGTCTTAAATTTATAAATAAATATAGATTGCGCATGTTTAACAAAAGCACAGCTATGGAGGAGTGTTCTCACTTTGTACCTCCATCACCATTTCCGTCGCAAAAAGAAGTAAGAAAATCAAAGAAAAATTTGTGTATCGATTACACTTTAAATACAATGAATAAATTCCTGCTGGAACAGCCGGTGGACTTTGATACACCCGACCTTGTAATTTCTCACATTGGTGGTAATGAAGAAGAATTACAATTCCAAAAGCTTAGCAATTTGGTTCAGGGTGACTGTCATAAAATATTACGTATACAAACTATCAAAGAAGTCAATAATCTCGTTCTTAAGCATGAAGATTTGGGCGCTTCATCGGCATTAGGCATTGAGATACCTCAACAACCTGATACGTTTGGTACAGAGACTAATCACGCGACTTTATTATGCTTCAAAAATTTATTGTATTTGAAACGATTGAATGAAAATTTGAATTACAGACCCCATCAGTGTCTTTTACGCTCAGTCAAGTTTCGTGATGCATTCAATCTACTCTGCATACGTCTCCAACAATTGTTTAAATATCCAATAGGCTTATCAAATATAACATTGCCCGAGGTTTATGTAGTAGATACATTCTCATATGAAAATGGTACTAGCAAGAGAAAAATTTCTGACACTGCCGGCATAATTGAAGAGGGCAAAACAAAAAAAAGACGATCGATAAAGAAAAGTTACGAAAGCCTGAGATGA
Protein Sequence
MNTLNNIDNDEAGILLFESIVCPEYENVNHCVNPFDTSRLDDEHQSKNVFAECNVVNCNRLLNSNKEITSSLLDLKRRITFALEKCERKLTAIDRRLQTHTAGESKVLICNASMPYFKDRNYFFASSNEDEILKEKRKELQVQNLLKVTPWSRNDRDTFIKSMKKQLKQDKLYKDKLERIRINNATQNLYSDVKDIEETEKQLSLEDFVKMVGHLHEREFDWFKISSTHFEDAHSPHDCRVMWNVFLHPSISKECWTKSEDTKLKKTAQEYKFRNWDEIARELNTKRTAYQCFIRYNTTKKMPKIKNCNWKRKEDKRLLKLIEIFKIGDFIPWGEIASWMWNRTKQQVYFRWMYSLAPYLIKGRFTKVEDNILTDAVIKYGTNFHKISTALMPNRSTVQLHDRYQTLLTNQIENWNLWTFSDDSKLLDLYNCLGSNWSAIAKKFSGKTRTQLRHRHAALQKYIKRGVSLNEIHKSHLPNGGCGNQQTDVAGTPSWDALKSSDNAKDTDHYSDIDKELIEYFHTERKNEMFVQEQKYLNLVENLKHNVTSLYNILQGLNAKLSIPDDISNSNVENVDIQLLYLLRTYLSKKDDKEHCLKFINKYRLRMFNKSTAMEECSHFVPPSPFPSQKEVRKSKKNLCIDYTLNTMNKFLLEQPVDFDTPDLVISHIGGNEEELQFQKLSNLVQGDCHKILRIQTIKEVNNLVLKHEDLGASSALGIEIPQQPDTFGTETNHATLLCFKNLLYLKRLNENLNYRPHQCLLRSVKFRDAFNLLCIRLQQLFKYPIGLSNITLPEVYVVDTFSYENGTSKRKISDTAGIIEEGKTKKRRSIKKSYESLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01067538;
90% Identity
-
80% Identity
-