Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_951802685.1
Location
OX637833.1:21196587-21199106[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.56 6.9e+02 1.0 0.0 12 43 205 244 200 247 0.78
2 5 7.2e-12 8.8e-09 35.9 1.3 1 45 253 299 253 300 0.95
3 5 7e-08 8.6e-05 23.1 1.9 3 43 309 353 307 356 0.96
4 5 2.9e-13 3.6e-10 40.3 0.0 1 46 362 408 362 408 0.97
5 5 7.9e-08 9.7e-05 22.9 0.2 4 41 418 455 416 456 0.96

Sequence Information

Coding Sequence
ATGAACACTCTAAACAATATTGATAATGACGAGGCCGAAATATTGTTGTTCGAAAGTATAGTGTGTCCTGAGTATGAAAATGTAAATCATTTCGTAAATGCTTTCGATACAAGCAGACTGGATGATGAACATCAGAGTGACAATGTCTTTGCCGAATGTAACGTCGTAAATTGTAATAGGTTGCTGAATTCGAACAAGAAAATAACCTCTTCGTTGTTAGACCTAAAAAGGCGCATAACCTTTGCTCTTGAAAAATGCGAACGAAAATTAACAGCAATAGACAGAGGTTTGCAAACACATACGGCTGGAGACACAAAGGTTTTAATTTGTAACGCTAGTATGCCATACTTTAAAGATAGAAATTACTTTTTCGCCTCCAGTAACCAAGATGATATTTTAAAAGAGAAGCGTAAAGAGTTGCAGGTGCGAAACCTATTAAAAGTTTCCCCGTGGGCAAGAAAGGATCGGGACACCTTTCTTAAATCCATACAACGGCAAGTCTGTACGGACAAATTATGTTCGAATAAGTTAGAACGCACAAGTATTAATAACGCAACGCAGAATTTCAATTCAAATGTGAAAGATAGAGAGGAAATAGAGAAACAGCTTCCATTTAAAGACTTTGTCAAAATGGTCGGCCCTCTGCAGAAAAGAGAGTTCGATTGGTTCAAAATATCTTCCACTCATTTCGAAGATGCACATTCGCCGCTGGATTGTAGAGTAATGTGGAATGTTTTTCTACATCCAAGAATCAATAAAGAGTGTTGGACAAAATCGGAGGACACGAAACTGAAAGAAACTgcacaaaaatataaatttcaaaacTGGGACGAAATTGCTAAAGAACTAAATACAAAGCGCACTGCCTACCAGTGTTTCATAAGATACAATACAACAAAGAAATTGCCTAAAATAAAGAATTGCAACTGGAAAAGGGAGGAAGATAAAAGGCTTTTGAAACtgatagaaatatttaaggTCGGCGATTTCATTCCCTGGGGTGAAATAGCTAGTTGGATGTGGAATAGAACTAAACAACAAGTTTATTTTAGATGGATGTATAGTTTAGCACCGTATTTAATAAAAGGCAGGTTCACTAAAGTCGAAGATAGTATTCTCGAGGATGCTGTTATTAAGTATGGTACTAATTTTCGTAAGATATCAGCTGCCGTGATGCCTAATAGATCCACTGTTCAACTTCATGATCGTTATCAAACATTGCTCACTAATCAACGCGAGAACTGGAATTTATGGACGCTCTCGGACGACAGCAAGTTGCTCGACCATTACAATTGTCTCGGTTCCAATTGGTCCGCCATAGCTAAGAAGTTTTCGTGCAAAACTAGAACACAATTAAGACATCGGCATGCAGCTTTGCAAAAATACATTAAAAGAGGTGTTTCTCTAAATGAGATACACGAAACTCGTCTACCTAATGGAGGAGGTGAAAACCAGCAAACAGATGTGGCAGGCGCACCTAGCTGGGATGCTTTTAAATCTTCTAACGATGCAAATGATACAGATTATTACAGTGATATAGATAGAGAATTGATCGAATACTTTCATACggaacgaaagaaagaaatattcgtcCAAGAGCAGAAGTATTCgaattttgttgaaaatttaaaacaTGACGTAACAAGTTTATATAACATTTTACAAGGATTGAATGCAAAACTTTCTATCCCTGATGACATTAGCAATTCAAACGTGGAAAATGCAGACATGCAATTATTATACTTgttaagaaaatatttgagCAAGAAAGATGATAAGGAACATTGTcttaaatttataaataaatatagattGCGCATGTTTAATAAAAGCACAGCTATGGAAGAGTGTTCACACTTTGTACCTCCACCACCATTTCAGTCGCAAAAGGAAGTAAGAAAATCAAAGAAAAATTTGTGTATCGATTACACTTTAAATACGAAGAATAAATTTCTGCTGGAACAGCCGGTAGACTTTGATACACCCGACCTTGTAATTTCTCATATTGGTGGCAATGAAGAAGAATTACAATTCCAAAAGCTTAGTAATTTGGTTCAGGGTGACTGTCAtaaaatatcacgtatacaaGCTACCAAAGAAGTCAATAATCTCTTTCGTAAGCATGAAGATGTGGACGCTTCGTCGGCATTAGGCATTGAGATACCTCAACAACCTGATATGTGCGCTACAGAGACTAATCATGCGACTTTATTATGCttaaaaaatttattgtaTTTGAAACGATTGAATGAAAGTTTGAACAACAGACCCCATCAGTGTCTTTTACGCTCAGTCAAATTTCGGGATGCGTTCAATCTACTCTGCATACGTCTccaacaattgtttaaatatccAATAGGCTTATCAAATATAACATTGCCCGAGGTTTATgcaatagatacattctcataTGAAGATGGTACTAGCAAGAGAAAAATTTCTGACGCTCCAGGCATAATTGAAGAgcgcaaaacaaaaaaaaaacgatcgATAAAGAAAAGTTACGAAAGCCTGAGATGA
Protein Sequence
MNTLNNIDNDEAEILLFESIVCPEYENVNHFVNAFDTSRLDDEHQSDNVFAECNVVNCNRLLNSNKKITSSLLDLKRRITFALEKCERKLTAIDRGLQTHTAGDTKVLICNASMPYFKDRNYFFASSNQDDILKEKRKELQVRNLLKVSPWARKDRDTFLKSIQRQVCTDKLCSNKLERTSINNATQNFNSNVKDREEIEKQLPFKDFVKMVGPLQKREFDWFKISSTHFEDAHSPLDCRVMWNVFLHPRINKECWTKSEDTKLKETAQKYKFQNWDEIAKELNTKRTAYQCFIRYNTTKKLPKIKNCNWKREEDKRLLKLIEIFKVGDFIPWGEIASWMWNRTKQQVYFRWMYSLAPYLIKGRFTKVEDSILEDAVIKYGTNFRKISAAVMPNRSTVQLHDRYQTLLTNQRENWNLWTLSDDSKLLDHYNCLGSNWSAIAKKFSCKTRTQLRHRHAALQKYIKRGVSLNEIHETRLPNGGGENQQTDVAGAPSWDAFKSSNDANDTDYYSDIDRELIEYFHTERKKEIFVQEQKYSNFVENLKHDVTSLYNILQGLNAKLSIPDDISNSNVENADMQLLYLLRKYLSKKDDKEHCLKFINKYRLRMFNKSTAMEECSHFVPPPPFQSQKEVRKSKKNLCIDYTLNTKNKFLLEQPVDFDTPDLVISHIGGNEEELQFQKLSNLVQGDCHKISRIQATKEVNNLFRKHEDVDASSALGIEIPQQPDMCATETNHATLLCLKNLLYLKRLNESLNNRPHQCLLRSVKFRDAFNLLCIRLQQLFKYPIGLSNITLPEVYAIDTFSYEDGTSKRKISDAPGIIEERKTKKKRSIKKSYESLR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01067538;
90% Identity
iTF_01067538;
80% Identity
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