Basic Information

Insect: Nomada fucata
Gene Symbol: -
Assembly: GCA_948146005.1
Location: OX411278.1:26055713-26062039[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.014 0.92 9.8 0.7 2 21 142 161 142 162 0.94

2 20 0.00079 0.053 13.7 3.0 1 23 202 225 202 225 0.92

3 20 0.0047 0.31 11.3 5.0 1 23 537 560 537 560 0.95

4 20 8.1 5.4e+02 1.1 1.7 5 23 567 585 566 586 0.92

5 20 0.00045 0.03 14.5 1.3 2 23 592 613 591 613 0.96

6 20 1 67 3.9 1.8 1 19 640 658 640 661 0.88

7 20 0.0026 0.17 12.1 0.7 1 22 780 801 780 801 0.96

8 20 1.8e-05 0.0012 18.9 0.4 2 23 809 831 809 831 0.94

9 20 0.38 25 5.2 6.0 3 23 843 864 841 864 0.94

10 20 0.54 36 4.8 0.1 2 19 884 901 884 904 0.88

11 20 0.1 6.8 7.0 5.1 1 23 911 934 911 934 0.93

12 20 0.31 21 5.5 5.4 1 23 945 968 945 968 0.94

13 20 0.26 17 5.8 0.0 1 19 1008 1026 1008 1026 0.96

14 20 0.82 54 4.2 5.2 1 23 1036 1059 1036 1059 0.94

15 20 0.004 0.27 11.5 0.3 1 20 1128 1147 1128 1149 0.94

16 20 0.0028 0.19 12.0 0.4 3 23 1158 1178 1156 1178 0.96

17 20 0.0019 0.12 12.5 1.0 1 23 1188 1211 1188 1211 0.93

18 20 2.6e-05 0.0017 18.3 0.3 2 21 1268 1287 1267 1288 0.93

19 20 0.0016 0.11 12.7 0.4 2 23 1296 1317 1295 1317 0.98

20 20 0.45 30 5.0 4.5 1 23 1327 1350 1327 1350 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.014	0.92	9.8	0.7	2	21	142	161	142	162	0.94
2	20	0.00079	0.053	13.7	3.0	1	23	202	225	202	225	0.92
3	20	0.0047	0.31	11.3	5.0	1	23	537	560	537	560	0.95
4	20	8.1	5.4e+02	1.1	1.7	5	23	567	585	566	586	0.92
5	20	0.00045	0.03	14.5	1.3	2	23	592	613	591	613	0.96
6	20	1	67	3.9	1.8	1	19	640	658	640	661	0.88
7	20	0.0026	0.17	12.1	0.7	1	22	780	801	780	801	0.96
8	20	1.8e-05	0.0012	18.9	0.4	2	23	809	831	809	831	0.94
9	20	0.38	25	5.2	6.0	3	23	843	864	841	864	0.94
10	20	0.54	36	4.8	0.1	2	19	884	901	884	904	0.88
11	20	0.1	6.8	7.0	5.1	1	23	911	934	911	934	0.93
12	20	0.31	21	5.5	5.4	1	23	945	968	945	968	0.94
13	20	0.26	17	5.8	0.0	1	19	1008	1026	1008	1026	0.96
14	20	0.82	54	4.2	5.2	1	23	1036	1059	1036	1059	0.94
15	20	0.004	0.27	11.5	0.3	1	20	1128	1147	1128	1149	0.94
16	20	0.0028	0.19	12.0	0.4	3	23	1158	1178	1156	1178	0.96
17	20	0.0019	0.12	12.5	1.0	1	23	1188	1211	1188	1211	0.93
18	20	2.6e-05	0.0017	18.3	0.3	2	21	1268	1287	1267	1288	0.93
19	20	0.0016	0.11	12.7	0.4	2	23	1296	1317	1295	1317	0.98
20	20	0.45	30	5.0	4.5	1	23	1327	1350	1327	1350	0.94

Sequence Information

Coding Sequence: ATGGCTCGAGTCCATGTTTATGAACGGGCAGTCAATGCTGTCTTTACGGATAGCAGGTTCTATGAAACACCAAATCTGTCCTATCACGGATTGAAAATTAAGGAAGAGCCACTCGATTCAGATAAGGACACGCCAGATGAATCGTCATCAGATAATGAAAATACCGGAGATCGATGTAAGATAATATCACCTGAAGCTGAATCTTCAGATGCTGTTAGTGGCACGAAAAATGAGTATATCTCGGCGCAAGTTCCCACTGATTCCGAAGATAAAAAATCGAATTTTTATCAAATAGAACGTAAAAGCTTATCACCGGAAGTCTTAGTACCAAACGATATGCCACATTTGACATCAAATAAAAAAGTTGAGCAGGCTACAAGCTTTTCACGTCGTAGGCCAATGGAAGTAACTACGTGGAAGCCAACTTGCAATATTTGTTTTATAAGATTTCCACATAAAAAAGCTTTATCCGTACACTACAAATCGTTTAAAAGTGCAGGGTTCGGTTGCAAAAAGTGTAGCGGTTGGTTTTTTGGTCGTACCTTATGGGCACGCCACCAAAAGATGCGCAATTGTAAAGAATCATGTGATGCACGGTTTAAATACGCGTGCAATTTTTGTGACCGAAGGTTTCCTACTAAAAGTAACATTCAAACGCATTTATTCCATTCTCATGGGGACTTAATACATGATGGTAAAAGTGAAACTATATTAACAAATAGTACTAATTATCTTGTGGCACGAACTCCAGAAGCATCCGAGAATATGTATGGTTCTATTCATAAACTTAAAACAAACTTCAGCTGTTCGAACGATACATGCGTGAGTAACTTATCTGATGCAAACGGCGCCCGTTTGAAAAGATTCCATGGTCCAACAAGTACACCATTACAAAAATTGAAAAGTTCCAACAATTCACCCTCGAGAAAGATGGGGAATTCAAGCAGTTCCTTCATGAAAAGATTGAAATTCGATAACGGTTTGTGTAGTACACCTGCAAAAAGGCAGAGGCAGACCATTCTTACAGATTTCATGTCGCTATGTAAAAAGGTAGAAAAAGTTGAGTGTGTTAGTCCAGTGAAAGTGACTGCCGCAGAAGATGGACCAATATTTAATTATGATGATGGTAGTTGCAATGAAACTCCTACATCATCAATGGCCCCAATAAAGACTGAGATGTCCACGCCTGTTGAGATTCCTAAAATGAATACACCTCGTAGTGAAATACCATTTGTTCGAATACACATCGATCCCGGTATGATGGTGGAATTATTAAGTAATAACAAACTAAATACTGAACTTGAAAGTTCTACTACTTCCAGCGATAAATCATACAATCTTAGATCAGAAAGAACGAGGCATTCTGAGTCAGCTACGTTTAGCGATTCGCTCAGCAAGAGAAGAAGAGTGAATGATACGCCTAGGCAAAGTCAAAGATTGTCGCAGGGCCGAAGGTTGAAGGCTAAATTTAATTGCAAAGAATGTTCAGTCTATCTCGAAAGATGTGATCGAATGTTGATTCAAAGGAACGATAAATTAGAAAATTGTGGAAACTATACGAAATATAACTTACGGCAAGGTATCGCTAAAGTTAAACAGAAGAAGCTGTATCGATGCCATCTATGCAGCAAACACTTCTCCTTAAAGGAGAACATGCGTGAACACCTAGAACTGTTTCACGTCGTTTATATGTCGAGCATATGCAAAGCACGATATACATCTATGAATAAATTACTGAATCATTATTTTCGTCATCATGTCTCCAAACGCCAAGAATGTTGTGTATGTCGCGAGACATTTAAGTCACCAGTATTATTGAAGCAACATATGCTCCTGCATTGCCTTAAGACCACACAATCCAAGAAGGACAGTCAGTCAATTGATATTGAAATTAATTGCAACAGAATTAAGAAGCATCACAAATGCCAAGGTTGTCGTAAACGATTTTGGTTACGTTCATGTTTGATTCAGCATGGGCAGGTGTGTACCCGAATGAATGACCGAATAGATGAACAGAAAAATCCTCGCGTAAAAGAATCACCGTCGTCGTTTTCGGAAGAAACAAGGGATCTGAAAGGTAACGTTACCGATGCTCAATACACTATCGACTGTTCAGCACAGTATTCAAGCAACGATCATCCTGTGCAGGCGCCTGATTTGAAACAAGGATTGTCTTTGACAAAAGCAGAGTCTCCCAAAAGTGCCGTTTCAAGTAGCCCTATAAAAACTGATGCTCGCATTTCACCGTCATCACCTACGAATGGAGGTAATAAAAGATTAATCAATGGGATTGCATGTGTAAAGGGGTACCAACTAGACGTGTCAGGAAAAGTCAAGTTTCCCTGTACTATTTGTGGGATACAGTTCCAAACATTTCAGAATTTGTGCATACACGAGCGCACCTTTAGCAAACCAGCCAATAACCGGTGCAATATCTGCGGTACTACCTTCCCTACTAAAAGACTATTGCAACTTCACATGCTTGCGACTCATACACCTTCCTGTGCGGAGAACTATAGGTTATTCTGCAAATTCTGTAACCAAGGTTTTCACAAAAAGGGATATCTTCAGAGTCACGAGCGACATTTCCACATTTCGCAGCCCCCTAAATCATGGCCGAGCCCCGATTACCTCTGGAATTCCAGTCCAGTCTGCAACATTTGCAACTTAGTATTCGAATCCTACGAACGGTTCATTGAACACAATATGTACTACTACAAGGGTCAAGTTTTCGTGTGCACATTTTGTAACAAATCATTCCAAGGAATGTATCAGCTTCATCACCACAACAAGTTAGTGCACAATCCGGAGAGCGCGAGGAAATCGTACCTTTATACCTGCGATGTTTGCAAAGAAGGGTTCAATTTCGAAACGCATTTCCATGCGCACAAATTACACGTTCACTTGTGCAAGTCGGATTCTAGGCACATATATATAAATCCAATGCAAGATCACAATTATGCGTTGATATCTAGCAATATTGCGGAATCAAGAGAGCCTATAGAGGTACCGGCGAAAACCTATGCCTGTAGCGTGTGCGCCTTGAACTTCACCAACGCGGAGGACCTATCTTTGCATGATATAGAATATTCCGTGGATGGTGACTTTCACTGCAACAAATGCAGCCGGAAGTGTCGCACCAGTGCAATCCTTGCCAAGCACCAGAGTTTGAATCACGCTGGCTGCGATATTAACCAGAGTTACAAGTGCCGTTTCTGCGGAGAAGTATCGACGACTAGTACGTCCATGCTGTGCCACGAGAAACATTTTCACGGGAACAATACAAATAATGCCACGAAAAATAATACGTCGAACCAATTAGCCACCGCGGATCAGAGCTTTCATCTAAGCGCAGATAAGGACGTGTTTATGAACGATACTTTTACGTGTTTGACTTGTGGAATGAAGTTCGATGACGAGATAAATTTGAAGCATCATGAATTGGAGTATTCCAATATAGGCGTATATGGCTGTAACATTTGCCAAAGAAAGTTTACTGAGCTATATTTACTGGAAGTACACAAAGCGAAACATGCCAGGTTGAACAGTACTTCATCTCCCCATCGGTGCCCAATATGCAACGAAGAATTTACAAACGTGGCGAACATTCGGACACACGTCTTACATCTACACCGATATGAATCGTTCGGTACTAATAGAGGGCAACAAAACTCTCAGAACGCTAACAATGCCCAGAAAAATAAGAATCCCATTTCGTCAATCCGGTCTACAAATGTAAACGAACCACTCAATGGTTTCGCATCCCCTGCTGCTAATAGTGCGCTAAAGGAGAATACTGTGAAGTGTCCCGAGTGTGATGTAGCATTTAGCAGCAACAAGAATCTAACGAAGCACAGGTCGAGATATGTCAACTCTGGGGATAACCAATGCACAATTTGCGGTCGTAGATTCCCTTGGGTTACATCACTCGAGCAACACTTACGCAAACACAACACTGTTGAGAATCGTTTCCTGAAGCACAAGTGTTATCACTGCGCGGAAAGATTTCGAAGCTCTGTGTCTGTTTATTCGCATATCATTCACATCCATGGTAAAGACAAATTGGTATATTCTGGTAGCGACGCAAGCAAGACTAACAGCAGCAATGTTAACAAAAAGATCTGTACTTCGATCGAAAACAGCCCGCCCGTGAAGAATCTTCCTGATAACTCTGAACCTTTAGCCATACCTCGGGAAGAACATGAAAGTGATCGAGATAAAATTTATACGGCTGCCACGATTGTAAACGAACCAGTCGCAAATAAATGTGCAGAAATAAATGCGCCCGCAATGACAGCGAAAGGAAATGATACTTTAAAAAATGCCGTAGGAAAGTCGCTCTATGACTTGGACCAACCTACATTGGAAAACGTTCAACCACACTCTGACACGATACAGGTAAAAGCAAGCGAAACTAGCGGAACTAGCGAAACTTCCTCAAGCGAGGTAATTAGGAAGATTGAAGCAGATTCTACGATGAATAATTCGAATTTCGTTGGGGACGAGATTTTTCAACGTATGCTAGAACTTCATAGTAATTGCGAATCATCTGGTTTGGTACTTAATCCTTCGATTGTTAAGGACGATTCTGAGGCGATTGAAATTGTTTGGGAAAAGAATGTAAATCTTGCAAAATCTGTATTGCTGAGCGATAGCGATCCGGATGTTCAGATTATAAGGGAATATCGTCCACCGTCTGTAATTCAGCAAAAGGAGAACAGTTTGTCTGTAAATGTAAAACCCCCGAACGTTGAAGTTGGACGATTAAAAGTCCGATCGTTCGCAAAGATTGTTGACTGA
Protein Sequence: MARVHVYERAVNAVFTDSRFYETPNLSYHGLKIKEEPLDSDKDTPDESSSDNENTGDRCKIISPEAESSDAVSGTKNEYISAQVPTDSEDKKSNFYQIERKSLSPEVLVPNDMPHLTSNKKVEQATSFSRRRPMEVTTWKPTCNICFIRFPHKKALSVHYKSFKSAGFGCKKCSGWFFGRTLWARHQKMRNCKESCDARFKYACNFCDRRFPTKSNIQTHLFHSHGDLIHDGKSETILTNSTNYLVARTPEASENMYGSIHKLKTNFSCSNDTCVSNLSDANGARLKRFHGPTSTPLQKLKSSNNSPSRKMGNSSSSFMKRLKFDNGLCSTPAKRQRQTILTDFMSLCKKVEKVECVSPVKVTAAEDGPIFNYDDGSCNETPTSSMAPIKTEMSTPVEIPKMNTPRSEIPFVRIHIDPGMMVELLSNNKLNTELESSTTSSDKSYNLRSERTRHSESATFSDSLSKRRRVNDTPRQSQRLSQGRRLKAKFNCKECSVYLERCDRMLIQRNDKLENCGNYTKYNLRQGIAKVKQKKLYRCHLCSKHFSLKENMREHLELFHVVYMSSICKARYTSMNKLLNHYFRHHVSKRQECCVCRETFKSPVLLKQHMLLHCLKTTQSKKDSQSIDIEINCNRIKKHHKCQGCRKRFWLRSCLIQHGQVCTRMNDRIDEQKNPRVKESPSSFSEETRDLKGNVTDAQYTIDCSAQYSSNDHPVQAPDLKQGLSLTKAESPKSAVSSSPIKTDARISPSSPTNGGNKRLINGIACVKGYQLDVSGKVKFPCTICGIQFQTFQNLCIHERTFSKPANNRCNICGTTFPTKRLLQLHMLATHTPSCAENYRLFCKFCNQGFHKKGYLQSHERHFHISQPPKSWPSPDYLWNSSPVCNICNLVFESYERFIEHNMYYYKGQVFVCTFCNKSFQGMYQLHHHNKLVHNPESARKSYLYTCDVCKEGFNFETHFHAHKLHVHLCKSDSRHIYINPMQDHNYALISSNIAESREPIEVPAKTYACSVCALNFTNAEDLSLHDIEYSVDGDFHCNKCSRKCRTSAILAKHQSLNHAGCDINQSYKCRFCGEVSTTSTSMLCHEKHFHGNNTNNATKNNTSNQLATADQSFHLSADKDVFMNDTFTCLTCGMKFDDEINLKHHELEYSNIGVYGCNICQRKFTELYLLEVHKAKHARLNSTSSPHRCPICNEEFTNVANIRTHVLHLHRYESFGTNRGQQNSQNANNAQKNKNPISSIRSTNVNEPLNGFASPAANSALKENTVKCPECDVAFSSNKNLTKHRSRYVNSGDNQCTICGRRFPWVTSLEQHLRKHNTVENRFLKHKCYHCAERFRSSVSVYSHIIHIHGKDKLVYSGSDASKTNSSNVNKKICTSIENSPPVKNLPDNSEPLAIPREEHESDRDKIYTAATIVNEPVANKCAEINAPAMTAKGNDTLKNAVGKSLYDLDQPTLENVQPHSDTIQVKASETSGTSETSSSEVIRKIEADSTMNNSNFVGDEIFQRMLELHSNCESSGLVLNPSIVKDDSEAIEIVWEKNVNLAKSVLLSDSDPDVQIIREYRPPSVIQQKENSLSVNVKPPNVEVGRLKVRSFAKIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01070605;
90% Identity: iTF_01067852; iTF_01069201;
80% Identity: -