Basic Information

Insect: Nomada lathburiana
Gene Symbol: -
Assembly: GCA_963667235.1
Location: OY763900.1:15587056-15593474[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.013 1 10.0 0.5 2 22 142 162 142 162 0.95

2 20 0.0016 0.12 12.9 3.2 1 23 202 225 202 225 0.92

3 20 0.0089 0.68 10.5 5.3 1 23 536 559 536 559 0.95

4 20 9 6.9e+02 1.1 1.7 5 23 566 584 565 585 0.92

5 20 0.0015 0.12 12.9 1.4 2 23 591 612 590 612 0.95

6 20 1 79 4.0 2.1 1 20 639 658 639 660 0.89

7 20 0.0046 0.36 11.4 1.6 1 22 779 800 779 800 0.96

8 20 2e-05 0.0015 18.9 0.4 2 23 808 830 808 830 0.94

9 20 0.42 32 5.2 6.0 3 23 842 863 840 863 0.94

10 20 0.6 46 4.8 0.1 2 19 883 900 883 903 0.88

11 20 0.11 8.7 7.0 5.1 1 23 910 933 910 933 0.93

12 20 0.23 18 6.1 4.7 1 23 944 967 944 967 0.94

13 20 0.28 22 5.8 0.0 1 19 1007 1025 1007 1025 0.96

14 20 0.91 70 4.2 5.2 1 23 1035 1058 1035 1058 0.94

15 20 0.0044 0.34 11.5 0.3 1 20 1126 1145 1126 1147 0.94

16 20 0.0031 0.24 12.0 0.4 3 23 1156 1176 1154 1176 0.96

17 20 0.0021 0.16 12.5 1.0 1 23 1186 1209 1186 1209 0.93

18 20 2.8e-05 0.0021 18.4 0.2 2 21 1266 1285 1265 1286 0.93

19 20 0.0018 0.14 12.7 0.4 2 23 1294 1315 1293 1315 0.98

20 20 0.49 38 5.0 3.8 1 23 1325 1348 1325 1348 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.013	1	10.0	0.5	2	22	142	162	142	162	0.95
2	20	0.0016	0.12	12.9	3.2	1	23	202	225	202	225	0.92
3	20	0.0089	0.68	10.5	5.3	1	23	536	559	536	559	0.95
4	20	9	6.9e+02	1.1	1.7	5	23	566	584	565	585	0.92
5	20	0.0015	0.12	12.9	1.4	2	23	591	612	590	612	0.95
6	20	1	79	4.0	2.1	1	20	639	658	639	660	0.89
7	20	0.0046	0.36	11.4	1.6	1	22	779	800	779	800	0.96
8	20	2e-05	0.0015	18.9	0.4	2	23	808	830	808	830	0.94
9	20	0.42	32	5.2	6.0	3	23	842	863	840	863	0.94
10	20	0.6	46	4.8	0.1	2	19	883	900	883	903	0.88
11	20	0.11	8.7	7.0	5.1	1	23	910	933	910	933	0.93
12	20	0.23	18	6.1	4.7	1	23	944	967	944	967	0.94
13	20	0.28	22	5.8	0.0	1	19	1007	1025	1007	1025	0.96
14	20	0.91	70	4.2	5.2	1	23	1035	1058	1035	1058	0.94
15	20	0.0044	0.34	11.5	0.3	1	20	1126	1145	1126	1147	0.94
16	20	0.0031	0.24	12.0	0.4	3	23	1156	1176	1154	1176	0.96
17	20	0.0021	0.16	12.5	1.0	1	23	1186	1209	1186	1209	0.93
18	20	2.8e-05	0.0021	18.4	0.2	2	21	1266	1285	1265	1286	0.93
19	20	0.0018	0.14	12.7	0.4	2	23	1294	1315	1293	1315	0.98
20	20	0.49	38	5.0	3.8	1	23	1325	1348	1325	1348	0.94

Sequence Information

Coding Sequence: ATGGCTCGTGTCCATGTTTATGAACGGGCAGTCAATGCTGTCTTTATGGATAGCAGGTTCTATGAAACATCAAATCTGTCCTATCACGGATTGAAAATTAAGGAAGAGCCACTCGATTCAGATAAGGACACGCCAGATGAATCGTCATCAGATAATGAAAATACCGGAGATCGATGTAAGATAATATCACCTGAAGCTGAATCTTCAGATGCCGTTAATCGCacgaaaaatgaatatatcTCGGCGCAAGTTCCCACTGATTCCGAACATAAAAAATCGGATTTTTATCAAATAGAATGTAAAAGCTTGTCATCGGAAGTCTTGGCACCAAACGATATGCCACATTTGACACCAAATAAAAAAGTTGGTCAGGATACAAGCTTTTCACGTCGTAGGCCTATGGAAGTAACTACGTGGAAGGCAACTTGtgatatttgttttataagATTTCCACATAAAAAAGCTTTATCCGTACACTACaaaacgtttaaaaatgtAGGGTTCGGTTGCAAAAAGTGTAGCGGTTGGTTTATTGGTCGTGCCTTATGGTCACGCCACCAGAAGATGCGCAATTGTAAAGAATCATGTGATGCACGGTTTAAATACGCGTGCAGTTTTTGTGATCGAAAGTTTCCTACTAAAAGTAACATTCAAACGCATTTATTCCATTCTCATGGGGACTTAATATATGATGGTAAAAGTGAAACTATATTAACAGATAGTACTAATTATCGTGTGGCACGAACTCCTGAAGCATCCGAAAATTTGTATGGTTCTATCCATAAACTTAAAACAAACATCAGTGGTTCGAACGATACATGCGTGAGTAACTTATCTGAGCCAAACGGTGCCCGTTTGAAAAGATTCCATGGTACAAAAACACCATTGCAAAAATTGAAGAGTTCCAATACTTCACCCTCGAGAAAGATGGGGAATTCAAGCAGTTCATTCATGAAAAGATTGAAATTCGATAACGGTTCGTGTACTACACCTGCAAAAAGGCAGAGGCAGACTATTCTTACGGATTTCATGTCGCTATGTAAAAAGGTAGAAAAAGTTGAGTGTGTTAGTCCAGAGAAAGTGACTGCCGCAGAAAGTGGtccaatatttaataatgataatggtaGTTGCAATGAAACTCCTACATCACCAATGGCCCCAATAAAGACTGAGATGTCCACGCCTGTTGAGAGTCCTAAAATTAATACACCTCGTAGTGAAATACCATTTGTTCGAATACACATCGATCCCGGTATGATGGTGGAATTATTAAGTAATAAGAAACTAAATACTGAACTTGAAAGTTCTACTACTTCTAGCGATAGATCATACAATCTTAGGTCAGAAAGAACGAGGCTTTCTGAGTCAGCTACGTTTAGCGTTTCGCccagaaagaaaagaaaaatgaatgatacGCCTAGGCAAAGTCAAAGATTGTCGCAGGGCCGAAGGTTGAAGgccaaatttaattgcaaagaaTGTTCAGTTCATCTCGAAAGATGTGATCAAATTTTGATTCAAAGGAActataaattagaaaattgtgGAAACTATACGAAATATAACTTACGGCAAGATATCGCTAAAGTTGAACAGAAGAAGCTGTATCGATGCCATCTATGCAGGAAGCACTTTTCTTTAAAGGAGAACATGCGTGAACACCTAGAACTATTTCATGTCGTTTATATGTCGAGCATATGCAAAGCACGATATACATCTATGAATAAATTACTGAATCATTATTTTCGTCATCATGTCTCCAAACGCAAAGAATGCTGTGTATGTCGCGAGACATTTAAGTCACCAGTATTATTGAAACAACATATGGTCCTGCATTGCCTTAAGACCACACAATCCAAGAAGGACACTCAATCAgttgatattgaaattaattgcaacagaATTAAAAAGCATCACAAATGCCAAGGTTGTCGTAAACGATTTTGGTTACGTTCATGTTTGATTCAGCATGAGCAGGTATGTAACCGACTGAATGACCGAAAAGATGAACAGAAAAATCCTCGCGTAAAAGAATCACCGTCGTCGTTTTCGGAAGAAACAAGGGATCTGAAAGGTAACGTTACCGATGCTCAATACACTATCGACTGTTCAGCACAGTATTCAAGCAACGATCATCCTGTGCAGGCGCCTGATTTGAAACAAGGATTGTCTTTGACAAACGCAGAGTCTCCCAAAAGTGCCGTTTCAAGTAGCCCTATTAAAACTGATGCTCGCACTTCACCATCATCACCTACGAATGGAGGTAATAAAAGATTAATCAATGGGATTGCATGTGTAAAGGGGTACCAACTAGACGTGTCAGGAAAAGTCAAGTTTCCCTGTACTATTTGTGGGATACAGTTCCACACATTTCAGAATTTGTGCATACACGAGCGCACCTTTAGCAAACCAGCCAATAACCGGTGCAATATCTGCGGTACTACCTTCCCTACTAAAAGACTATTACAACTTCACATGCTTGCGACTCATACACCTTCCTGTGCGGAGAACTATAGGTTATTCTGCAAATTCTGTAACCAAGGTTTTCATAAAAAGGGATATCTTCAGAGTCACGAGCGACATTTCCACATTTCGCAGCCCCCTAAATCATGGCCGAGCCCCGATTACCTCTGGAATTCCAGTCCAGTCTGCAACATTTGCAACTTAGTATTCGAATCCTACGAACGGTTCATTGAACACAATATGTACTACTACAAGGGCCAAGTTTTCGTGTGCACATTTTGTAACAAATCGTTCCAAGGAATGTATCAGCTTCATCATCACAACAAGTTAGTGCACAACCCGGAGAGCGCACGGAAATCGTACCTTTACTCCTGCGATGTTTGCAACGAAGGGTTCAATTTTGAAACGCATTTCCACGCGCACAAATTACACGTTCACTTATGCAAGTCGAATTCTAGGCAGATATATATCAATCCAATGCAAGATCACAATTATGCGTTGACATCTAGCAATATTGCGGAATCAAGAGAGCCTATAGAGGTACCTGCGAAAACCTACGCCTGTAGCGTGTGTGCCTTGAACTTCACGAACGCGGAGGACCTATCTTTGCATGATATAGAATATTCCGCGGATGGTGACTTTCACTGCAACAAATGCAGCCGTAAGTGTCGCACCAGTGCAATCCTTGCCAAGCACCAGAGTTTGAATCACGCTGGCTGCGATATTAACCAGAGTTACAAGTGCCGTTTTTGCGGTGAAGTATCGACGACTAGTACGTCCATGTTGTGCCACGAGAAACATTTTCACGGGAACAATACATATAATGCCACGAAAAATAATACGTCGACCCAATTAGCCACGGATCAGAGCTATCACCTAAGCACAGATAAGGATGTGTTTATGAACGATACTTTTACGTGTTTGACATGTGGAATGAAGTTCGATGACGAGATAAATTTGAAGCATCATGAATTGGAGTATTCCAATATAGGCGTATATGGCTGTAACATTTGCCAAAGAAAGTTTACTGAGCTATATTTACTGGAAGTACACAAAGCGAAACATGCCAGGGTGAACAGTACTTCATCTCCTCATCGGTGCCCAATATGCAACGAAGAATTTACAAACGTGGCGAACATTCGGACACACGTGTTACATCTACACCGATATGAATCGTTCGGTACTAAGAGAGGGCAACAAAACTCTCAGAACGCTAACAATGctcagaaaaataataatcctaTTTCGTCAATCCGATCTGCAAATGTAACCGAGCCACTCAATGGTTTCGCATCCCATGCTGCTAATAGTGCGCTAAAGGAGAATACTGTGAAGTGTCCCGAGTGTGATGTAGCATTTAGCAGCAGCAAGAATCTAACGAAGCACAGGTCGAGATATGTGAACTCTGGGGAAAACCAATGCACAATTTGTGGTCGTAGATTCCCTTGGGTCACATCACTCGAGCAACATTTACGTAAACACAACACTGTTGAGAATCGTTTCTTGAAGCACAAGTGTTTTCACTGCGCGGAAAGATTCCGAAGCTCTGTGGCTGTTTATTCGCATATCATTCACATCCATGGTAAAGACAAATTGGTATATTGTGGTAGCGACGCAAGCAAGACTAACAACAGCAATGTTAACAAAAAGATCTTTACTTTGATCGAAAACAGCCCGCCCATGAAGGATCTTCCTGATAACTCTGAACCTTTACCCATACCTCCGGTAGAATATGAAAGTGATCGAGATAAAATTTATACGGCTGCCACGATTGTAAACGAAGCAGTCGCAAATAAATGTGCAGAAATAAATGCGCCCGCAATGACTGCGGTAGGAAATGATATTTTAAAGAAACATGACTTGGACCAACCTACATTGAAAAACGTTCAACCACACTTTGATACGATACAGGAAAAAGCTAGCGAAACTGGCGAAACTTGCGAAACTAGCGAAACTCCTTCAAGCGAGGTAATTAGTAAGACTGAAGCAGATTCTACGATGAATAATTCGAATTTCGTTGGGGACGAGATTTTTCAGCGTATGCTAGAACTTCATAGTAATTGCGAATCATCTGGTTTAGTGCTTAATCCTTCGAATGTTAAGGACGATTCTGaggcgattgaaattgtttggGAAAAGAATGCAAATCTTGCAAAATGTGTATTGCTCAGCGATAGCGATCCGGATGTACATATTATAAGGGAATATCGTCAACCGTCTGAAATTCAGCAGAAGGAGAACAGTTTGTCAGTAAATTTGAAACCCCCGAACGGTGAAGTTGGACGATTAAAAGTCCGGTCGTTCGCAAAAATTGTTGACTGA
Protein Sequence: MARVHVYERAVNAVFMDSRFYETSNLSYHGLKIKEEPLDSDKDTPDESSSDNENTGDRCKIISPEAESSDAVNRTKNEYISAQVPTDSEHKKSDFYQIECKSLSSEVLAPNDMPHLTPNKKVGQDTSFSRRRPMEVTTWKATCDICFIRFPHKKALSVHYKTFKNVGFGCKKCSGWFIGRALWSRHQKMRNCKESCDARFKYACSFCDRKFPTKSNIQTHLFHSHGDLIYDGKSETILTDSTNYRVARTPEASENLYGSIHKLKTNISGSNDTCVSNLSEPNGARLKRFHGTKTPLQKLKSSNTSPSRKMGNSSSSFMKRLKFDNGSCTTPAKRQRQTILTDFMSLCKKVEKVECVSPEKVTAAESGPIFNNDNGSCNETPTSPMAPIKTEMSTPVESPKINTPRSEIPFVRIHIDPGMMVELLSNKKLNTELESSTTSSDRSYNLRSERTRLSESATFSVSPRKKRKMNDTPRQSQRLSQGRRLKAKFNCKECSVHLERCDQILIQRNYKLENCGNYTKYNLRQDIAKVEQKKLYRCHLCRKHFSLKENMREHLELFHVVYMSSICKARYTSMNKLLNHYFRHHVSKRKECCVCRETFKSPVLLKQHMVLHCLKTTQSKKDTQSVDIEINCNRIKKHHKCQGCRKRFWLRSCLIQHEQVCNRLNDRKDEQKNPRVKESPSSFSEETRDLKGNVTDAQYTIDCSAQYSSNDHPVQAPDLKQGLSLTNAESPKSAVSSSPIKTDARTSPSSPTNGGNKRLINGIACVKGYQLDVSGKVKFPCTICGIQFHTFQNLCIHERTFSKPANNRCNICGTTFPTKRLLQLHMLATHTPSCAENYRLFCKFCNQGFHKKGYLQSHERHFHISQPPKSWPSPDYLWNSSPVCNICNLVFESYERFIEHNMYYYKGQVFVCTFCNKSFQGMYQLHHHNKLVHNPESARKSYLYSCDVCNEGFNFETHFHAHKLHVHLCKSNSRQIYINPMQDHNYALTSSNIAESREPIEVPAKTYACSVCALNFTNAEDLSLHDIEYSADGDFHCNKCSRKCRTSAILAKHQSLNHAGCDINQSYKCRFCGEVSTTSTSMLCHEKHFHGNNTYNATKNNTSTQLATDQSYHLSTDKDVFMNDTFTCLTCGMKFDDEINLKHHELEYSNIGVYGCNICQRKFTELYLLEVHKAKHARVNSTSSPHRCPICNEEFTNVANIRTHVLHLHRYESFGTKRGQQNSQNANNAQKNNNPISSIRSANVTEPLNGFASHAANSALKENTVKCPECDVAFSSSKNLTKHRSRYVNSGENQCTICGRRFPWVTSLEQHLRKHNTVENRFLKHKCFHCAERFRSSVAVYSHIIHIHGKDKLVYCGSDASKTNNSNVNKKIFTLIENSPPMKDLPDNSEPLPIPPVEYESDRDKIYTAATIVNEAVANKCAEINAPAMTAVGNDILKKHDLDQPTLKNVQPHFDTIQEKASETGETCETSETPSSEVISKTEADSTMNNSNFVGDEIFQRMLELHSNCESSGLVLNPSNVKDDSEAIEIVWEKNANLAKCVLLSDSDPDVHIIREYRQPSEIQQKENSLSVNLKPPNGEVGRLKVRSFAKIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01070605;
90% Identity: iTF_01067154;
80% Identity: -