Basic Information

Insect: Nomada goodeniana
Gene Symbol: -
Assembly: GCA_963969485.1
Location: OZ018302.1:22528497-22534839[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.36 26 5.4 2.4 2 19 142 159 142 162 0.95

2 20 0.00095 0.069 13.6 3.2 1 23 202 225 202 225 0.92

3 20 0.005 0.37 11.3 5.0 1 23 536 559 536 559 0.95

4 20 8.8 6.4e+02 1.1 1.7 5 23 566 584 565 585 0.92

5 20 0.0017 0.13 12.7 1.2 2 23 591 612 590 612 0.96

6 20 1.1 79 3.9 1.8 1 19 639 657 639 660 0.88

7 20 0.0045 0.33 11.4 1.6 1 22 779 800 779 800 0.96

8 20 1.9e-05 0.0014 18.9 0.4 2 23 808 830 808 830 0.94

9 20 0.41 30 5.2 6.0 3 23 842 863 840 863 0.94

10 20 0.59 43 4.8 0.1 2 19 883 900 883 903 0.88

11 20 0.11 8.1 7.0 5.1 1 23 910 933 910 933 0.93

12 20 0.16 11 6.6 4.9 1 23 944 967 944 967 0.94

13 20 0.32 24 5.6 0.0 1 19 1007 1025 1007 1025 0.96

14 20 0.89 65 4.2 5.2 1 23 1035 1058 1035 1058 0.94

15 20 0.0043 0.32 11.5 0.3 1 20 1127 1146 1127 1148 0.94

16 20 0.003 0.22 12.0 0.4 3 23 1157 1177 1155 1177 0.96

17 20 0.002 0.15 12.5 1.0 1 23 1187 1210 1187 1210 0.93

18 20 2.8e-05 0.0021 18.3 0.3 2 21 1267 1286 1266 1287 0.93

19 20 0.0017 0.13 12.7 0.4 2 23 1295 1316 1294 1316 0.98

20 20 0.48 35 5.0 4.5 1 23 1326 1349 1326 1349 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.36	26	5.4	2.4	2	19	142	159	142	162	0.95
2	20	0.00095	0.069	13.6	3.2	1	23	202	225	202	225	0.92
3	20	0.005	0.37	11.3	5.0	1	23	536	559	536	559	0.95
4	20	8.8	6.4e+02	1.1	1.7	5	23	566	584	565	585	0.92
5	20	0.0017	0.13	12.7	1.2	2	23	591	612	590	612	0.96
6	20	1.1	79	3.9	1.8	1	19	639	657	639	660	0.88
7	20	0.0045	0.33	11.4	1.6	1	22	779	800	779	800	0.96
8	20	1.9e-05	0.0014	18.9	0.4	2	23	808	830	808	830	0.94
9	20	0.41	30	5.2	6.0	3	23	842	863	840	863	0.94
10	20	0.59	43	4.8	0.1	2	19	883	900	883	903	0.88
11	20	0.11	8.1	7.0	5.1	1	23	910	933	910	933	0.93
12	20	0.16	11	6.6	4.9	1	23	944	967	944	967	0.94
13	20	0.32	24	5.6	0.0	1	19	1007	1025	1007	1025	0.96
14	20	0.89	65	4.2	5.2	1	23	1035	1058	1035	1058	0.94
15	20	0.0043	0.32	11.5	0.3	1	20	1127	1146	1127	1148	0.94
16	20	0.003	0.22	12.0	0.4	3	23	1157	1177	1155	1177	0.96
17	20	0.002	0.15	12.5	1.0	1	23	1187	1210	1187	1210	0.93
18	20	2.8e-05	0.0021	18.3	0.3	2	21	1267	1286	1266	1287	0.93
19	20	0.0017	0.13	12.7	0.4	2	23	1295	1316	1294	1316	0.98
20	20	0.48	35	5.0	4.5	1	23	1326	1349	1326	1349	0.94

Sequence Information

Coding Sequence: ATGGCTCGTGTCCACGTTTATGAACGGGCAGTCAATGCTGTCTTTACGGATAGCAGGTTCTATGAAACCCCAAATCTGTCGTATCACGGATTGAAAATTAAGGAAGAGCCACTCGATTCAGATAAGGACACGCCAGATGAATCGTCATCAGATAATGAAAATACCGGAGATCGATGTAAGATAATATCACCTGAAGCTGAATCTTCAGATGCTGTTAATCGCACGAAATATGAGTATATCTCGGCGCAAGTTCCCACTGATTCCGAAGATAAAAAATCGAGTTTTTATCAAATAGAACGTAAAAGCTTATCACCGGAAGTCTTAGTACCATACGATATGCCACATTTGACATCAAATAGAAAAGTTAAGCAGGCTACAAGCTTTCCACGTCGTAGGCCAATGGAAGTAACTACGTGGCAGCCAActtgtaatatttgttttataagaTTTCCACATAAAAAAGCTTTATCCGTACACTGcaaatcgtttaaaaatgcAGGATTCGGTTGCAAAAAGTGTAGCTGTTGGTTTTTGAGTCGTATCTTATGGACACGCCACCAGAAGATGCGCAATTGTAAAGAATCATGTGATGCACGGTTTAAATACGCGTGCAATTTTTGTGATCGAAAGTTTGCTACTAAAAGTAACATTCAAACGCATTTATTCCATTCTCATGGGGAGTTAATATATGATGGTAAAATTGAAACTATATCAACAGATAGTACTAATTATCTTGTGGCACGAACTCCTGAAGCATCCGAAAATATGTATGGTTCTATCCATAAACTTAAAACAAACTTCAGTGGTTCGAACGATACATGCGTGAGTAACTTATCTGATCCAAACGGGGCCCGTTCGAAAAGATTCCATGGTCCAACAAGTACACCATTACAAAAATTGAAGAGTTCCAATACTTTACCCTCGAGGAAGATGGGGAATTCAAGCAGTTCCTTCGTGAAAAGATTGAAATTCGATAACGGTTCGCGTAGTACACCTGCAAAGAGGCAGAGGCAGACCATTCTTACAGATTTCATGACGCTATGTAAAAAGGTAGAAAAAGTTGAGTGTGTTAGTCCAGTGAAAGTGACTGCCGCAGAAGATGGaccaatatttaattatgatGGTAGTTGCAATGAAACTCCTACCTCATCAATGGCCCCAATAAAGACTGAGATGTCCACGCCTGTTGAGATTCCTACAATTAATACACCTCGTAGTGAAATACCATTTGTTCGAATACACATCGATCCCGGTATGATGATGGAATTATTAAGTAATAAGAAACTAAATACTGAACTTGAAAGTTCTACTACTTCTAGCGATAGATCATACAATCTTAGATCAGAAAGAACGAGGCATTCTGAGTCAGGTACGTTTAGCGATTCGTTCAgcaagagaagaaaaatgaatgataCGCCTAGGCAAAGTCAGAGATTGGCGCAGGGCCGAAGGTTGGAGgccaaatttaattgcaaagaATGTTCAGTTCATCTCGAAAGATGTGATCAAATTTTGAGTcaaacgaacgataaattaGACAATTGTGGAAACTATACGAAATATAACTTACGGCAAGGTATCGCTAAAGTTAAACAGGAGAAGGTGTATCGATGCCATCTATGCAGCAAGCACTTCTCTTTAAAGGAGAACATGCGTGAACACCTAGAACTGTTTCACGTCGTTTATATGTCGAGCATATGCAAAGCACGATATACATCTATGAATAAATTACTGAATCATTATTTTCGTCATCATGTCTCCAAACGCCAAGAATGCTGTGTATGTCGCGAGACATTTAAGTCACCAGTATTATTGAAGCAACACTTGCTCCTGCATTGCCTTAAGACCACACAATCCAAGAAGGACACTCAATCAGTggatattgaaatgaattgcAACAGAATTAGGAAGCATCACAAATGCCAAGGTTGTCGTAAACGATTTTGGTTACGTTCATGTTTGATTCAGCATGGGCAGGTATGTAACCGAATGAATCACCGAAAAGATGAACAGAAAAATCCTCGCGTAAAAGAATCACCGTCGTCGTTTTCGGAAGAAACAAGGGATCTGAAAGGTAACGTTACCGATGCTCAATACACTATCGACTGTTCAGCACAGTATTCAAGCAACGATCATCCTGTGCAGGCGCCTGATTTGAAACAAGGATTGTCTTTGACAAAAGCAGAGTCTCCCAAAAGTGCCGTTTCAAGTAGCCCTATAAAAACTGATGCTCGCATTTCACCGTCATCACCTACGAATGGAGGTAATAAAAGATTAATCAATGGGATTGCATGTGTAAAGGGGTACCAACTAGACGTGTCAGGAAAAGTCAAGTTTCCCTGTACTATTTGTGGGATACAGTTCCACACATTTCAGAATTTGTGCATACACGAGCGCACCTTTAGCAAACCAGCCAATAACCGGTGCAATATCTGCGGTACTACCTTTCCCACTAAAAGACTATTGCAACTTCACATGCTTGCGACTCATACACCTTCCTGTGCGGAGAACTATAGGTTATTCTGCAAATTCTGTAACCAAGGTTTTCATAAAAAGGGATATCTTCAGAGTCACGAGCGACATTTCCACATTTCGCAGCCCCCTAAATCATGGCCGAGCCCCGATTACCTCTGGAATTCCAGTCCAGTCTGCAACATTTGCAACTTAGTATTCGAATCCTACGAACGCTTCATTGAACACAATATGTACTACTACAAGGGTCAGGTTTTCGTGTGCACGTTTTGTAACAAATCATTCCAAGGAATGTATCAGCTTCATCACCACAACAAGTTAGTGCACAACCCGGAGAGCGCGCGGAAATCGTACCTTTATACCTGCGATGTTTGCAACGAAGGGTTCAATTTCGAGACGCATTTCCATGCGCACAAATTACACGTTCACTTGTGCAAGTCGAATTCTAGGCAGATGTATATGAATCCAATGCAAGATCACAATTATGCGTTGACATCTAACAATATTGCGGAATCAAGTGAGCCTATAGAGGTACCTGCGAAAACCTACGCCTGTAGCGTGTGCGCCTTGAACTTCACCAACGCGGCGGACCTATCTTTGCATGATATAGAATATTCCGTGGATGGTGACTTTCACTGCAACAAATGCAGCCGGAAGTGTCGCACCAGCGCAATCCTTGCCAAGCACCAGAGTTTGAATCACGCTGGCTGCGATATTAACCAGAGTTACAAGTGCCGTTTCTGCGGAGAAGTATCGACGACTAGTACGTCCATGTTGTGCCACGAGAAACATTTTCACGggaacaatataaataatgccgCGAAAAATAATACGTCGAACCAATTAGCCACCACGGATCAGAGCGTTCACCTAAGCACAGATAAGGACGTGTTTATGAACGATACTTTTACGTGTTTGACTTGTGGAATGAAGTTCGATGACGAGATAAATTTGAAGCATCATGAATTGGAGTATTCGAATATAGGCTTATATGGCTGTAACATTTGCCAAAGAAAGTTTACTGAGCTATATTTACTGGAAGTACACAAAGCGAAACATGCCAGGTTGAACAGTACTTCATCTCCCCATCGGTGCCCAATATGCAACGAAGAATTTACAAACGTGGCGAACATTCGGACACACGTCTTACATCTACACCGATATGAATCGTTCGGTACCAATAGAGGGCAAGAAAACTCTCAGAACGCTAACAATGCCCAGAAAAATAAGAATCCTATTTCGTCAATCCTGTCTACAAATGTAACCGAGCCGCTCAATGGTTTCGCATCCCCTGCTGCTAATAGTGCGCTAAAGGAGAATACTGTGAAGTGTCCCGAGTGTGACGTAGCATTTAGCAGCAACAAGAATCTAACGAAGCACAGGTCGAGATATGTGAACTCTGGGGATAACCAATGCACAATTTGCGGTCGTAGATTCCCATGGGTCACATCACTCGAGCAACATTTACGTAAACACAACAATGTTGAGAATCGTTTCTTGAAGCACAAGTGCTATCACTGCGCGGAAAGATTCCGAAGCTCTGTGTCCGTTTATTCGCATATCATTCACATCCATGGTAAAGACAAATTGGTACATTCTGGTAGTGACGCAAGCAAGACTAACAACAGCAATGTTAACAAAAAGATCCGTACTTTGATCGAAAACAGCCCGCCCGTGAAGAAGCTTCCTGATAACTCTGAACCTTTAGCCATACCTCCGGAAGAATATGAGAGTAATCGAGATAAAATTTATACGGCTGCCACGGTTGTAAACGAACCAGTCGCAAATAAATGTGCAGAAATAAATGTGCCCGCAATGACAGGGGAAGGAAATGATACTTTAAAAAATGCGGTAGGAAAGTCGCTCTATGACTTGGACCAACCTACATTGGAAAACGTTCAACCACACTCTGTTACGATACAGGAAAAAGTTAGCGAAACTTCCTCAAGCGAGGTAATTAGGAAGACTGAAGCAGATTCTACGATGAATAATTCGAGTTTCGTTGGGGACGAGATTTTTCAGCGTATGCTAGAGCTTCATAGTAATTGCGAATCATCTGGATTGGTACTTAATCCTTCGATTGTTACGGACGATTCTGAggcgattgaaattgtttgGGAAAAGAATACAAGTCTTGCAAAATGTGTATTGCTGAGCGATGGCGATCCGGATGTTCAAATTATAAGGGAATATCGTCCACCGACTGTAATTCAGCAGAATCAGAACAGTTTGTCTGTAAATTTAAAACCCCCGAACGTTGAAGTTGGACGATTAAAAGTCCGGTCGTTCGCAAAGATTGTTGACTGA
Protein Sequence: MARVHVYERAVNAVFTDSRFYETPNLSYHGLKIKEEPLDSDKDTPDESSSDNENTGDRCKIISPEAESSDAVNRTKYEYISAQVPTDSEDKKSSFYQIERKSLSPEVLVPYDMPHLTSNRKVKQATSFPRRRPMEVTTWQPTCNICFIRFPHKKALSVHCKSFKNAGFGCKKCSCWFLSRILWTRHQKMRNCKESCDARFKYACNFCDRKFATKSNIQTHLFHSHGELIYDGKIETISTDSTNYLVARTPEASENMYGSIHKLKTNFSGSNDTCVSNLSDPNGARSKRFHGPTSTPLQKLKSSNTLPSRKMGNSSSSFVKRLKFDNGSRSTPAKRQRQTILTDFMTLCKKVEKVECVSPVKVTAAEDGPIFNYDGSCNETPTSSMAPIKTEMSTPVEIPTINTPRSEIPFVRIHIDPGMMMELLSNKKLNTELESSTTSSDRSYNLRSERTRHSESGTFSDSFSKRRKMNDTPRQSQRLAQGRRLEAKFNCKECSVHLERCDQILSQTNDKLDNCGNYTKYNLRQGIAKVKQEKVYRCHLCSKHFSLKENMREHLELFHVVYMSSICKARYTSMNKLLNHYFRHHVSKRQECCVCRETFKSPVLLKQHLLLHCLKTTQSKKDTQSVDIEMNCNRIRKHHKCQGCRKRFWLRSCLIQHGQVCNRMNHRKDEQKNPRVKESPSSFSEETRDLKGNVTDAQYTIDCSAQYSSNDHPVQAPDLKQGLSLTKAESPKSAVSSSPIKTDARISPSSPTNGGNKRLINGIACVKGYQLDVSGKVKFPCTICGIQFHTFQNLCIHERTFSKPANNRCNICGTTFPTKRLLQLHMLATHTPSCAENYRLFCKFCNQGFHKKGYLQSHERHFHISQPPKSWPSPDYLWNSSPVCNICNLVFESYERFIEHNMYYYKGQVFVCTFCNKSFQGMYQLHHHNKLVHNPESARKSYLYTCDVCNEGFNFETHFHAHKLHVHLCKSNSRQMYMNPMQDHNYALTSNNIAESSEPIEVPAKTYACSVCALNFTNAADLSLHDIEYSVDGDFHCNKCSRKCRTSAILAKHQSLNHAGCDINQSYKCRFCGEVSTTSTSMLCHEKHFHGNNINNAAKNNTSNQLATTDQSVHLSTDKDVFMNDTFTCLTCGMKFDDEINLKHHELEYSNIGLYGCNICQRKFTELYLLEVHKAKHARLNSTSSPHRCPICNEEFTNVANIRTHVLHLHRYESFGTNRGQENSQNANNAQKNKNPISSILSTNVTEPLNGFASPAANSALKENTVKCPECDVAFSSNKNLTKHRSRYVNSGDNQCTICGRRFPWVTSLEQHLRKHNNVENRFLKHKCYHCAERFRSSVSVYSHIIHIHGKDKLVHSGSDASKTNNSNVNKKIRTLIENSPPVKKLPDNSEPLAIPPEEYESNRDKIYTAATVVNEPVANKCAEINVPAMTGEGNDTLKNAVGKSLYDLDQPTLENVQPHSVTIQEKVSETSSSEVIRKTEADSTMNNSSFVGDEIFQRMLELHSNCESSGLVLNPSIVTDDSEAIEIVWEKNTSLAKCVLLSDGDPDVQIIREYRPPTVIQQNQNSLSVNLKPPNVEVGRLKVRSFAKIVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01070605;
90% Identity: iTF_01067154;
80% Identity: -