Nfuc007002.1
Basic Information
- Insect
- Nomada fucata
- Gene Symbol
- ZNF639
- Assembly
- GCA_948146005.1
- Location
- OX411280.1:9965302-9968266[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.18 12 6.2 0.2 2 23 373 394 373 394 0.97 2 14 0.00014 0.0093 16.0 1.5 2 23 436 458 435 458 0.95 3 14 2.5e-05 0.0016 18.4 0.1 2 23 465 486 464 486 0.96 4 14 4.6e-06 0.00031 20.7 2.6 1 23 492 514 492 514 0.96 5 14 0.00024 0.016 15.3 1.9 1 23 523 545 523 545 0.97 6 14 0.00058 0.038 14.1 2.6 1 23 551 573 551 573 0.98 7 14 3e-06 0.0002 21.3 0.5 1 23 578 600 578 600 0.97 8 14 2.2e-05 0.0014 18.6 2.8 1 23 607 629 607 629 0.99 9 14 0.00076 0.05 13.7 0.3 2 23 663 685 662 685 0.96 10 14 0.023 1.5 9.1 1.9 1 23 691 713 691 713 0.95 11 14 0.0015 0.1 12.8 3.9 1 23 719 741 719 741 0.98 12 14 5.3e-05 0.0035 17.4 0.6 1 23 747 769 747 769 0.95 13 14 6.9e-06 0.00045 20.2 1.2 1 23 775 797 775 797 0.98 14 14 0.00053 0.035 14.2 0.3 2 23 803 824 802 824 0.96
Sequence Information
- Coding Sequence
- ATGAAGATCATTTGTGCAGCAGAGAATTGTAAATACTCTTCGAATAATGAGGACTCAAGGCACATCATGTTTATTAATTTTCCAAACAGTGATGTGTCGAAAATATGGGCCCATCATTGTGGCAGAACAGACCTTCTGATGAAGTCCAATGAAGAGTTGCATTTAAATTATTATATATGTTCTAGTCATATAGAGGATCGTTATTATTTAAATAAAACAAATCCTATCGTAATAGATCAAGAAGCAGTCCCAACGCTATTTGAATCGCCTGTCGTTATAGAAAAGGATTCAAGAAACATATTTGGCAAGAATGAACGAACAGAACTAACTGACAATGTTGTACTATCGTATTGCGATATCGATGTTGGAGTTGATCAGTATCGTGATGTCAGTATTAACTTCCCAAATATATGTAGGATATGCGGAGAAGCATCATTGAACGATATAGACATATTTGCATTGAAAGGGATAGAATTGAAGTTAAAAGAAAAGATAAATATACATCTCCCGATCAATGTCGATGTAGAAGATTTAATGCCACAGAAATTATGCATGACTTGTTACAATAAACTAGAAATTGCACATTCATTAGTTGTGACTTCCATAAAAACAGACATGAGATTGAAGAGATATCTGAACATGAGTGACGAGATCAGCTATGACGACAGATACGATGCGATAGCAAAAGAGTGCACCTTAGAAATAGCAGAAGAATCTTGTGTAAACGAAGCAGAAGTTGCATCTATAGAGTTAACATCTAACAAAATTGAAGAAATATCGGAGCGCCAAGAAATTACTCAGAAGTCCAGCTGTACGAACAATATGAAAAAACAATTGCAACCTAAGTTAAGCAGTATCATTGAATCCGACAGCATTGAATCTAAAGGCAATGAAACTGCAAACAAAGTTATAAAACGTTATCTAAACAATGGAACAACCAAGACAGAAACAGAAATCCAGCGCATGCATTGCAAAGATACATTTAAAATGCAAGAAATATCCGGAAATCATAAAATCGCATGTAACGCGGAAGACACAATGGGACAAAACAGAAATGAAACTAATTCTAAAAAGCCAAATAACTTAAAAGAAATAAACTTTGCATTCATTACAAGAACATGCGATGTTTGTCAGGAATATTTTGACACTGATATACTATTTGTTGAACATAAGCGTATACATTGTAAACTTGTTCAAGAGGAACATTATCAGGAATTAGATAAATTAAACATGGACGAAGAAGAGGTGCAAAATATATATAAGCATTCTTACAATAATACTATTCCATTAATGGAGGTATTTAAGAAATGTGGCCATTGCGATCTAGTCTATACTACAAAAAAGGAATTGCTAAATCATATTATGGAACGTCACGAGAGACAAATTTTACTCAAATGTGTTATATGCGACCGAAGCTTTGAAAGATGGTCTAGTTTGGATGTGCATGAAGCTACCCACAGAATAGATAAGCCTTACCTGTGCGATTTATGCGGAAAAAGCTTTAAACATTCGAACAATCTGAGGGGCCATAAAAGAATTCATTTAGATGAGTCAAAAAAAAAGCGTCACGTTTGTGAAGTATGTGGGAATGCTTTCAGATCTAGATTTCATTTGGGGGAACATATGAACCAGCACAGTGGGAATAAACCTTACTCTTGCGAAAAGTGCGCAAAAACTTTTTACAAAAGAATACAATTGAGGCAGCATAAATTGTCTCATGGTCTAAATAAACATGTCTGTCCAGTATGTGGTGCAGCTTTTAATCGTAAGGGAAACATGAATACGCATCTTAAACGCCATAACAATGAGGATAGTAGATACACATGTAGTGTCTGCACACAAAGATTTAAATCAATGAGCGATTTAAAGTTACATAGGAAAACGCACACGAAACAAGACATCCTAGATAACGTACAAAAGAGGTGTTCCGATAAAACCGCAGTGCTAAATCACGACCGCATATATAACGATGAAAGGGCCAACGTTGAATGCGATATGTGCGGGAAAAAATTAGCCAGTAGGAATTCTTTGATATATCATAAAAGATCTGTTCATTCTTCCGAGAGGGCCCATATGTGTCAATTCTGCGGAGAATCATTTGTTTCTAAAGAAGCATGCCTAATACACGAACGAATACATACTGGGGAACGCCCTTATAATTGCAAAGTATGTAAAATGGAATACAAATGTTCTAGCAATCTCAATCAGCATATGAAAATCCATTCTGGCATTAAACCGTACAAATGCATATCTTGTGACAAAAGTTTTACGCGTAAGGGTGCTTTAAATGTACATGAACGACTTCATACAGGGGAGAGACCGTATGCGTGTGAAATATGCAATAGAACCTTCTCCCAGAAAAATGACATGATAAAACATTCTAAAACGCACGACACAAAATCGTTACATTGCGAACAATGTGGTGAAGTGTTCGCGAAGAAGAAGGATATTTTGAAACATATTGCTGTGCATGAACAATACGATCCTATGGTTGAAGAGTACGTACGAATGCAGCAACAAGTGCAACCCTACAACGTGGATATACAGTGTCCGCAATTTGAATAA
- Protein Sequence
- MKIICAAENCKYSSNNEDSRHIMFINFPNSDVSKIWAHHCGRTDLLMKSNEELHLNYYICSSHIEDRYYLNKTNPIVIDQEAVPTLFESPVVIEKDSRNIFGKNERTELTDNVVLSYCDIDVGVDQYRDVSINFPNICRICGEASLNDIDIFALKGIELKLKEKINIHLPINVDVEDLMPQKLCMTCYNKLEIAHSLVVTSIKTDMRLKRYLNMSDEISYDDRYDAIAKECTLEIAEESCVNEAEVASIELTSNKIEEISERQEITQKSSCTNNMKKQLQPKLSSIIESDSIESKGNETANKVIKRYLNNGTTKTETEIQRMHCKDTFKMQEISGNHKIACNAEDTMGQNRNETNSKKPNNLKEINFAFITRTCDVCQEYFDTDILFVEHKRIHCKLVQEEHYQELDKLNMDEEEVQNIYKHSYNNTIPLMEVFKKCGHCDLVYTTKKELLNHIMERHERQILLKCVICDRSFERWSSLDVHEATHRIDKPYLCDLCGKSFKHSNNLRGHKRIHLDESKKKRHVCEVCGNAFRSRFHLGEHMNQHSGNKPYSCEKCAKTFYKRIQLRQHKLSHGLNKHVCPVCGAAFNRKGNMNTHLKRHNNEDSRYTCSVCTQRFKSMSDLKLHRKTHTKQDILDNVQKRCSDKTAVLNHDRIYNDERANVECDMCGKKLASRNSLIYHKRSVHSSERAHMCQFCGESFVSKEACLIHERIHTGERPYNCKVCKMEYKCSSNLNQHMKIHSGIKPYKCISCDKSFTRKGALNVHERLHTGERPYACEICNRTFSQKNDMIKHSKTHDTKSLHCEQCGEVFAKKKDILKHIAVHEQYDPMVEEYVRMQQQVQPYNVDIQCPQFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01066991; iTF_01067760; iTF_01067660; iTF_01069122; iTF_01066308; iTF_01070412; iTF_01066418; iTF_01065621; iTF_01069719; iTF_01068345; iTF_01070521; iTF_01065722; iTF_01068445; iTF_01069024; iTF_01069824;
- 90% Identity
- iTF_01069122;
- 80% Identity
- iTF_01066991;