Nfuc005197.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Nomada fucata
Gene Symbol
Hr39
Assembly
GCA_948146005.1
Location
OX411275.1:15398096-15403271[+]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.32 1.5e+03 -2.1 4.2 116 160 40 78 15 106 0.53
2 5 0.34 1.6e+03 -2.2 7.0 52 163 293 405 283 425 0.68
3 5 3 1.4e+04 -7.7 10.9 70 160 440 530 412 547 0.47
4 5 2.2e-08 0.0001 21.5 0.1 1 25 613 637 613 684 0.80
5 5 3.9e-70 1.8e-66 224.9 0.1 188 408 774 989 641 989 0.91

Sequence Information

Coding Sequence
ATGTCGGAGCAAAACGGGCCCAGCGAGGGCCCAGGACCTGGCCCAGGCCCAGGTCCTGCCTGGTGGCCAGCCTCGCAGTCCTGGAAGACGAACTCCTGCACCGCCGCCTCCACGTCCGCCAGTTCCGCTAGTTCCGTCAGTTCCGCCGCTCCAGACAACTCCGCCTCCGTCTCTTCGCCCTGCACCACCTCTACCTCCTCCTTGGCGACCACAACTTCGGCCACTTCATCGACCAGTTGCTGTACCTCGACCCCTGGCGGACCGTCGTGCACGATCACCGCGGCACGTTCCTGCGAGACAGGAAAGAATGTCTCTGTCACGACGATCAGCGTCCCACCTAACCAGGATATACACGATGGGAAGGGTATATGCAAGTATCTTGCCGGCCAAAATGGCGTGACGGTATCCGTAGTCTCGAACTGCGGCTCGGTATTAGGTTGTGGAAACGCCAATGTCGTGTCCACCACGGGAATCGGAACCAACACCGGATCGCAGAGTATCGGTATCGGCATCGGAGTCAATGTCCTGAACCAGAACACCGCGGACGACGACGCAGAGGACAGCGACGTGGAGATCAGCAAAATCGACTTCCGAGGGGTGAATTTGCGCACAAAAAAGAAACGGGACTTGTCGGGTAGCCAGAGCGGAGAAAAAATCGGCGATAGGGACACCGAGGATGGAAATGGTTGTTACGATGGGAACGACGTGTCCCAGCAGCAACCAGAAAGACCGATGTCATGGGAAGGAGAACTATCTGACCAAGAAATGTCCTCCAATACAATTACGAATCAAGATACGCATGAAGATACATCAATGGAAGGAGTTCAAGTATGTGGCGCAAGTCCTGGGCCCGTTGAACAGAAATTTCCAATAAAGACGGAACCAGACTTCCAGTCTAGCCCGGGATTCGCATTTGCATCTTTCCACGATGCCGGATTACCTTTGGCACATGGCCAACAAATGCCACAGCAGCAGCAACAGCAGCAACACAATATTGAAAATCTGGAACAAACTCAACAAAATGATTTGCCTCTGCTCGTAGGAAAGCTACTTGGTGGTTACAATAGTTCAACTCCAAACCATAGTCCAGTGTTAAATCCAAGACATCATCTGACAAAGCATAGCCATACGAGATCGCAGGTCCCATCGCCGGACTCAGCGATTCATTCCGCATACAGCGTGTTCAGCTCGCCGACGCAAAGTCCCCATGCAGCTCGTCACTCCGCGTTAGGCGCAGGAAGCCCGGTTCCATCCTCGTCGTTATCCCTCTCGCGGCACAGCTTCAACAATTCGACGTCCTCGTTGTCGTTGTCGCTGTCACACTCCCTATCGAGGAACAATTCCGATGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTTAGTCCACCTACGCATTCACCCGTCCAGCAACCAAGGCATCCGCAGCATCATCAGCATCAAGTGACTCAAGGAAGTCCCCTTCATCTGCCCACAACAGCCTCCCCCGCCATTGCACACCATTACACATCCTCTGCACCGGGTTCTGAGCTATCACCGGAAGGACACGCCGCCACAGACGATCAGGAAGACTGTCGAATACCATCAGCGCCTTCTGGTATTTCTACTAGGCAGCAACTAATCAATAGCCCgtgtccaatttgcggcgacaagatcagtggttttcattacggaatattctcgtgcgagtcgtgcaagggatttttcaaacgcaccgtccagaatcgaaagaattatgtgtgccttagaggcgcgggctgtccggtcactgttgctaccaggaagaaatgccccgcctgccgctttgacaagtgcctcaatatggGTATGAAGCTGGAGGCAATCAGAGAGGATCGCACCAGAGGTGGACGAAGTACGTATCAATGTACGTACACTCTTCCAGCAAGTCTGGTAGGTAGTCCTGCGAGCAGCATGGCCAGTGACAAGTTAGCCACTGGTGGAAACTGTAGTCCAGCCCCAGCTGGCAGTGAGCATCACTATACAGCCAGGCACCACTCAAATCACTCTCATAAGATTCAGGTGGTGCCGCAACTACTGCAGGATATCATGGATGTGGAGCACTTGTGGCATTACAATGATAACGATCGTATGTCCGGGGTTCAAGCTGGAGGACCAAACGCTGGGAGAAACAATGATATGTTACTTGGAGCCGGAAACAGGGGTGGTTCTGGAACAGGAAGTGATACATGTCCAGTGGTCGAATGTTCCTCCAACGGAACCGCGGGAAACGGGAATCCTAGTAACAGAAGAGACGACAGGTCGTGCTCTAACGTTACTACAGTGGGCAACGAACAACGTGCTGCACCCATTAACAGCAGCCCACAAATCAGTAATACGAATGGTAACCCCACGCAGCATCCTGACTTTCTGTCGAACCTCTGCAACATCGCTGACCACCGACTCTATAAAATAGTGAAATGGTGCAAGAGTTTACCGTTGTTTAAGAACATTTCCATCGACGATCAGATATGCCTGTTAATCAACTCCTGGTGCGAGCTGTTGCTCTTTTCGTGCTGTTTTCGCAGCATGAGCACTCCCGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACATTAGAACAGGCTAGACAGCTTGGTTTGGCGACCTGCATCGAGAGGATGCTCGCTTTTACTAATAATCTGAGAAGGCTTCGAGTAGATCAGTACGAATACGTGGCTATGAAGGTAATAGTGCTGTTGACCTCTGATACGAGTGAATTGAAGGAACCTGAAAAAGTTCGAGCATCTCAGGAAAAGGCTTTACAAGCATTACAACAGTATACCATAGCAAGGTACCCGGAAATGCCTGCCAAGTTTGGTGAATTGCTATTGAGAATTCCGGATTTGCAAAGAACATGTCAGGCAGGAAAGGAATTGTTAAGCGCGAAACGTGCTGAAGGAGAAGGCAGCTCATTCAATTTGTTGATGGAATTATTGAGAGGGGATCACTAA
Protein Sequence
MSEQNGPSEGPGPGPGPGPAWWPASQSWKTNSCTAASTSASSASSVSSAAPDNSASVSSPCTTSTSSLATTTSATSSTSCCTSTPGGPSCTITAARSCETGKNVSVTTISVPPNQDIHDGKGICKYLAGQNGVTVSVVSNCGSVLGCGNANVVSTTGIGTNTGSQSIGIGIGVNVLNQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDLSGSQSGEKIGDRDTEDGNGCYDGNDVSQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGASPGPVEQKFPIKTEPDFQSSPGFAFASFHDAGLPLAHGQQMPQQQQQQQHNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVTQGSPLHLPTTASPAIAHHYTSSAPGSELSPEGHAATDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASSMASDKLATGGNCSPAPAGSEHHYTARHHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRMSGVQAGGPNAGRNNDMLLGAGNRGGSGTGSDTCPVVECSSNGTAGNGNPSNRRDDRSCSNVTTVGNEQRAAPINSSPQISNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00733987;
90% Identity
iTF_01539632;
80% Identity
iTF_01067000; iTF_01066970;