Hqua007006.1
Basic Information
- Insect
- Halictus quadricinctus
- Gene Symbol
- grn
- Assembly
- GCA_028454245.1
- Location
- CM052117.1:10913637-10922863[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-18 5.1e-15 54.9 5.6 1 35 49 82 49 83 0.97
Sequence Information
- Coding Sequence
- ATGATAAAAATTGAAGTTTGCGTAATGGTTTCCAAGCGGTACAAGTGCCATTTAAATTTGCGGATGTTGGTTTGGGTTCAGAGTGGTGTTTTGATAGGTTTCGGGGATTCTGATGGGAGTGCGGCGAGGCGGGCGGGCACCAGCTGCGCTAACTGCAAGACTGCAACCACCACGCTATGGCGGAGGAATCAGGCCGGCGAGCCAGTCTGCAACGCGTGCGGCCTATACTACAAGCTCCACAACGTGAACCGGCCGCTGACGATGAAGAAGGAGGGCATACAGACGAGGAACCGGAAGCTCTCGTCGAAGAGCAAGAAGAAGAAGGCCGGAGGATGCCTGGGTCTGGGAGGCGTGATGGGAGACATGATCAAGGCGAGCGGACACCTCGACCTGGACAACAAACCGTTCCATTCTGGATTTGGCTCACCCATGGGCACGTCGCAGCATCATCACACGATGCATCCGGCGATGCAGCATTACATGTATCACACGGGTGTCGGCGTGGCCGGAGGTCTTCATCAAGGATTTGCGCCACCGGCGCCGCCCCCCATACACCCGCACTCGCACTCGCATTCCCATTCCCATCACATGACGAGTCTTCAGGGTCTACAGCTGGCCGCTACCACGAACGCGATGACCGGCTGGCGATCGGAGTACACATGA
- Protein Sequence
- MIKIEVCVMVSKRYKCHLNLRMLVWVQSGVLIGFGDSDGSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMGTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00024954;
- 90% Identity
- iTF_00439137; iTF_01414627; iTF_01411974; iTF_01412767; iTF_01389863; iTF_00090071; iTF_00398508; iTF_01058039; iTF_01509249; iTF_00046626; iTF_00460164; iTF_01207785; iTF_00266126; iTF_00997392; iTF_01056465; iTF_00047640; iTF_00684496; iTF_01070736; iTF_00866385; iTF_00861562; iTF_00867067; iTF_01538417; iTF_00863636; iTF_00011611; iTF_01066622;
- 80% Identity
- iTF_00084964; iTF_00866385; iTF_00861562; iTF_00867067; iTF_00085843; iTF_00087605; iTF_01090360;