Nfer005743.1
Basic Information
- Insect
- Nomada ferruginata
- Gene Symbol
- lilli
- Assembly
- GCA_963583965.1
- Location
- OY757216.1:13697389-13717584[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-07 0.015 15.0 0.4 44 128 51 134 49 147 0.53 2 2 2.6e-09 6.5e-05 22.8 0.2 327 381 210 265 201 281 0.78
Sequence Information
- Coding Sequence
- ATGACGGGCCGGGGGGCAAGGGGCGAGGAAAAAAGGGCGAAGGACGTCGCGGAGAGGAGAAGTTCGCCCGGTCATGGACCGACGCGAGCGGGTAGAGGCGCGCACGAAGCTGGCGGGGGTGGAGGAGGAGTGGTGAATCCAGATGCCCGCGACAGTACGACGCAGCAAATTCAATCGAAACTGGGCAACTATTCTCTGGTGAAGCATCTCCTGGACGAGCCTAAACGGCTGATCGGCATCGAGGGTGTACCGCCGAGTCCAGCCCCGTCCCCGTCACCCTCGTCCCTACGAACGAGTTCCAGTTCGGTCGGTTCGAATTCCAGGAGCTCGCCCTCCTCCCAAGAATTCAAGAAACCCGGAGGACTGAGGACCGGCGGCtcgtcctcgtcgtcgtcgagCCATCAGCGCGGCGGTTTCGTGAAGCCAGCCGACGGGAAGCCACCGTACGGTGGCAGGGGTGGTTATCCTGGCCAGCCGGTGAAGCACGGGGGCAACAGCAACGATCATCGAAGCCACGGTTTATTACCCGGCAAAGGACCGCCCCCGAATTCACCCGGGAACGGAACGCTCGTTGGCAATTCGAATATCGGAAATTCCAGCGGTGGCAGACTTCACTGTGCCGGCAGCAGGCTGTCCAGGTTGCCTCTCGATAACgGAACAAACTCGAGGCCCGGCCCCACCGAGAATTCAGCCGATGTGGAGAACATTTTAAAGGAAATGACCATGCCGCCCACACCTCTGACGGCCATCGCTCAGACCCCGAGGAAGGAGCTCGAGTCGAAGTTCACGTTCAATCCTGTGCTGGCTAAGTTGACCGAAGTGACGCCGCAGGAAGCTACGAAGCCTCGTAAGTAA
- Protein Sequence
- MTGRGARGEEKRAKDVAERRSSPGHGPTRAGRGAHEAGGGGGGVVNPDARDSTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPPSPAPSPSPSSLRTSSSSVGSNSRSSPSSQEFKKPGGLRTGGSSSSSSSHQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPGKGPPPNSPGNGTLVGNSNIGNSSGGRLHCAGSRLSRLPLDNGTNSRPGPTENSADVENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVTPQEATKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00088814;
- 90% Identity
- iTF_01069659;
- 80% Identity
- -