Nfab016440.1
Basic Information
- Insect
- Nomada fabriciana
- Gene Symbol
- Hr39
- Assembly
- GCA_907165295.1
- Location
- OU015688.1:15635353-15640665[-]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.87 5.7e+03 -3.5 5.6 116 152 40 78 19 103 0.48 2 5 0.36 2.4e+03 -2.3 7.5 51 163 292 405 270 424 0.72 3 5 3 2e+04 -7.0 10.3 70 151 440 521 411 546 0.44 4 5 2.1e-08 0.00014 21.6 0.1 1 25 613 637 613 686 0.80 5 5 5.1e-70 3.3e-66 224.5 0.0 195 408 781 989 761 989 0.94
Sequence Information
- Coding Sequence
- ATGTCGGAGCAAAATGGGCCCAGCGAGGGCCCAGGACCTGGCCCAGGCCCAGGTCCTGGCTGGTGGCCAGCCTCGCAACCCTGGAAGACGAACTCCTGCACCACCACCTCCACGTCCGCCAGTTCCGCTAGTTCCGTCAGTTCCGCCGCTCCAGACAACTCCGCCTCCGTCTCTTCGTCCTGCACCACCTCTACCTCCTCCTTGGCGACCACAACTTCGGCCACTTCGTCGACCAGTTGCTGTACCTCGACCCCTGGCGGACCGTCGTGCACGATCACCGCGGCCCGTTCCTGCGAGACAGGAAAGAATGTCTCTGTCACGACGATCAGTGTCCCACCTAACCAGGATATACACGACGGGAAGGGTATATGCAAGTATCTTGCCGGCCAAAATGGCGTGACGGTATCCGTAGTTTCGAACTGTGGCTCGGTATTAGGTTGTGGAAACGCCAATGTCGTGTCCACCACGGGAATCGGAACCAACACCGGATCGCAGAGTATCGGTATCGGCATCGGAGTCAATGTCCTGACCCAGAACACCGCGGATGACGACGCAGAGGACAGTGACGTCGAGATCAGCAAAATCGACTTCCGAGGGGTGAATTTGCGCACAAAAAAGAAAAGAGACTTGTCGGGTAGCCAAAGCGGGGAAAAAATCGGCGATAGGGACACCGAGGATGGGACTGGTTGTTACGATGGGAACGATGTGTCCCAGCAACAACCAGAAAGACCGATGTCATGGGAAGGGGAACTATCTGACCAAGAAATGTCCTCTAATACAATTACGAATCAAGATACGCATGAAGATACGTCAATGGAGGGAGTTCAAGTATGTGGCGCAAGTCCTGGGCCCGTGGAACAGAAATTTCCAATAAAAACGGAACCAGACTTTCAATCTAGCTCGGGATTCGCATTTGCTTCTTTCCACGAGGCCGGATTACCTTTGGCGCATGGCCAACAAATGCCACAGCAGCAGCAACAGCAGCAACACAATATTGAAAATCTGGAACAGACTCAACAAAATGATTTGCCTCTTCTCGTAGGAAAACTACTTGGTGGTTACAATAGTTCTACTCCAAACCATAGCCCAGTGTTAAATCCAAGACATCATCTGACAAAGCATAGCCATACGAGATCGCAGGTACCATCGCCGGACTCAGCGATTCATTCCGCATACAGCGTGTTCAGCTCGCCAACGCAAAGTCCTCATGCAGCTCGTCACTCCGCGTTAGGCGCAGGAAGCCCGGTTCCATCCTCGTCGTTATCCCTCTCGCGGCACAGCTTCAACAATTCGACGTCCTCGTTATCGTTGTCGCTGTCACACTCCCTCTCGAGGAACAATTCCGATGCCTCGAGCAGCTGCTACAGCTACGGCTCTCTTAGTCCACCCACGCATTCACCCGTCCAGCAACCAAGGCATCCGCAACATCATCAGCACCAGGTGACTCAAGGAAGTCCTCTTCATCTCCCCACAACAGCCTCCCCCGCCATTGCACACCATTATACTTCCTCTGCACCGGGTTCTGAGCTGTCACCGGAAGGACACGCCACCACAGACGACCAGGAAGACTGTCGAATACCATCAGCGCCATCTGGCATTTCGACTAGGCAGCAACTAATCAATAGCCCATGTCCAATTTGCGGAGACAAGATCAGTGGTTTTCATTATGGAATCTTCTCGTGCGAGTCGTGCAAGGGATTTTTTAAACGCACCGTCCAGAATCGAAAGAATTATGTGTGCCTTAGGGGCGCGGGCTGTCCGGTCACTGTTGCTACCAGGAAGAAATGCCCCGCCTGCCGCTTTGATAAGTGCCTCAATATGGGTATGAAGCTGGAGGCAATCAGAGAGGATCGCACCAGAGGTGGACGAAGTACGTATCAATGTACGTACACTCTTCCAGCAAGTCTGGTAGGTAGTCCTGCGAGCAGCATGGCCAGTGATAAGTTAGCCACTGGTGGAAACTGTAGTCCAGCACCAGCTGGCAGTGAGCATCACTATACAGCCAGGCACCACTCAAATCACTCTCATAAGATTCAGGTGGTGCCGCAACTACTGCAGGATATCATGGATGTGGAGCACTTGTGGCATTACAATGATAACGATCGTATGTCCGGGGTTCAAGCTGGAGGAGCAAACGCTGGGAGAAACAATGATATGTTACTTGGTGCCGGAAACAGGGGAGGTTCCGGAACAGGAAGTGATACATGTCCAGGTGTCGAATGTTCCTCAAACGGAACCGCGGGAAACGGGAATCCTAGTAACAGAAGAGACGACAGGTCGTGTTCTAACGTTACTACAGTGGGCAACGAACAACGTGCTGCGCCCATTAACAACAGCCCCCAAATCAATAATACGAATGGTAACCCCACGCAGCATCCTGACTTTCTGTCGAACCTCTGCAACATCGCTGACCACCGACTCTATAAAATAGTGAAATGGTGCAAGAGTTTACCGTTGTTTAAGAACATTTCCATCGACGATCAGATATGCCTGTTAATTAATTCCTGGTGCGAGCTGTTGCTCTTCTCGTGCTGTTTTCGCAGCATGAGCACTCCTGGTGAAATTAGAGTGTCTCTCGGCAAGTCGATTACATTAGAACAAGCTAGACAGCTTGGTTTGGCGACCTGCATCGAGAGGATGCTCGCCTTTACTAACAATCTGAGAAGGCTTCGAGTAGATCAGTACGAATACGTGGCGATGAAGGTAATAGTACTGTTGACCTCTGATACGAGTGAATTGAAGGAACCTGAAAAAGTTCGAGCATCTCAGGAAAAGGCTTTACAAGCATTGCAACAGTATACCATAGCAAGGTACCCGGAAATGCCTGCCAAGTTTGGTGAATTGCTATTGAGAATTCCGGATTTGCAAAGGACATGTCAAGCAGGAAAGGAGTTGTTAAGCGCGAAACGTGCTGAAGGAGAAGGCAGCTCATTCAATTTGTTGATGGAATTATTGAGAGGGGATCACTGA
- Protein Sequence
- MSEQNGPSEGPGPGPGPGPGWWPASQPWKTNSCTTTSTSASSASSVSSAAPDNSASVSSSCTTSTSSLATTTSATSSTSCCTSTPGGPSCTITAARSCETGKNVSVTTISVPPNQDIHDGKGICKYLAGQNGVTVSVVSNCGSVLGCGNANVVSTTGIGTNTGSQSIGIGIGVNVLTQNTADDDAEDSDVEISKIDFRGVNLRTKKKRDLSGSQSGEKIGDRDTEDGTGCYDGNDVSQQQPERPMSWEGELSDQEMSSNTITNQDTHEDTSMEGVQVCGASPGPVEQKFPIKTEPDFQSSSGFAFASFHEAGLPLAHGQQMPQQQQQQQHNIENLEQTQQNDLPLLVGKLLGGYNSSTPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGAGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQPRHPQHHQHQVTQGSPLHLPTTASPAIAHHYTSSAPGSELSPEGHATTDDQEDCRIPSAPSGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGAGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPASLVGSPASSMASDKLATGGNCSPAPAGSEHHYTARHHSNHSHKIQVVPQLLQDIMDVEHLWHYNDNDRMSGVQAGGANAGRNNDMLLGAGNRGGSGTGSDTCPGVECSSNGTAGNGNPSNRRDDRSCSNVTTVGNEQRAAPINNSPQINNTNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLAFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGSSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00733987;
- 90% Identity
- iTF_01539632;
- 80% Identity
- iTF_01065599; iTF_01065631;