Nfab006978.1
Basic Information
- Insect
- Nomada fabriciana
- Gene Symbol
- lilli
- Assembly
- GCA_907165295.1
- Location
- OU015695.1:6312061-6323976[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-07 0.0052 16.2 0.6 44 129 38 124 34 136 0.56 2 2 2.5e-09 4.9e-05 22.9 0.2 327 381 199 254 189 270 0.78
Sequence Information
- Coding Sequence
- ATGGGCGCCCAAAGGGCGGGCTCGTCGGACCCACGACGTAGTACGTTCAAGGGCCTGCTTTATGGCACCCCCAAACGTATATCGTTCCCGCTAGTGAATCCAGATGCCCGCGACAGTACGACGCAGCAAATTCAATCGAAACTGGGCAACTATTCTCTGGTGAAGCATCTCCTGGACGAGCCTAAACGGCTGATCGGCATCGAGGGTGTACCGCCGAGTCCAGCCCCGTCCCCGTCACCCTCGTCCCTACGAACGAGTTCCAGTTCGGTCGGTTCGAATTCCAGGAGCTCGCCCTCCTCCCAAGAATTCAAGAAACCCGGAGGACTGAGGACCGGTGGCTCGTCGTCGTCCTCGTCGTCGTCGAGCCATCAGCGCGGCGGTTTCGTGAAGCCAGCCGACGGGAAGCCACCGTACGGTGGCAGGGGTGGTTATCCTGGCCAGCCGGTGAAGCACGGGGGCAACAGCAACGATCATCGAAGCCACGGTTTATTACCCGCCAAAGGACCGCCCCCGAATTCACCCGGGAACGGAACGCTCGTTGGCAATTCGAATATCGGAAATTCCAGCGGCGGCAGACTTCACTGTGCCGGCAGCAGGCTGTCCAGGTTGCCTCTCGATAACGGAACAAACTCGAGGCCCGGCCCCACCGAGAATTCAGCCGATGTGGAGAACATTTTAAAGGAAATGACCATGCCGCCCACACCTCTGACGGCCATCGCTCAGACCCCGAGGAAGGAGCTCGAGTCGAAGTTCACGTTCAATCCTGTGCTGGCTAAGTTGACCGAAGTGACGCCGCAGGAAGCTACGAAGCCTCGTAAGTAA
- Protein Sequence
- MGAQRAGSSDPRRSTFKGLLYGTPKRISFPLVNPDARDSTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPPSPAPSPSPSSLRTSSSSVGSNSRSSPSSQEFKKPGGLRTGGSSSSSSSSSHQRGGFVKPADGKPPYGGRGGYPGQPVKHGGNSNDHRSHGLLPAKGPPPNSPGNGTLVGNSNIGNSSGGRLHCAGSRLSRLPLDNGTNSRPGPTENSADVENILKEMTMPPTPLTAIAQTPRKELESKFTFNPVLAKLTEVTPQEATKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00088814;
- 90% Identity
- iTF_01069659;
- 80% Identity
- -