Npro007748.1
Basic Information
- Insect
- Noctua pronuba
- Gene Symbol
- retn
- Assembly
- GCA_905220335.1
- Location
- LR999909.1:11171600-11176101[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.3e-20 3.1e-16 60.3 0.0 17 89 2 72 1 72 0.95 2 2 3.3 1.1e+04 -2.4 0.0 25 38 199 212 161 215 0.57
Sequence Information
- Coding Sequence
- ATGGGCACTCCAATCAACCGGCTACCGATTATGGCGAAGTCGGTGCTCGACCTGTACGAGCTGTACAACCTGGTGATTGCCCGCGGTGGGCTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTGCGGCTGCCGTCGTCCATCACGTCTGCTGCCTTCACGTTGCGCACACAATACATGAAATACTTGTATGACTACGAATGTGAGAAGAAGAACCTATCAACCAGAAGTGAGCTGGACGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGCCGCGCTTCAGGACAGTATGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAATCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTGTCACTGTCGCTGGGGGGCGTGGCCCCGCGCCTGCCGCCACTGCCGCCGCACGCGCCTCATCTGGCGCAGCATGACATTGAGTACAGGGTGCGCGAGTACATGAAAATGATACAGCAACAGAGGGAGCTTATGAGAAATGGCTCCGAATCACCCCCCAGCAACGGCCAAGGGCCAATAATGTCACCCCGCGACGCCGCTCTCAGTGCCATCGATGTCTCCCGCCTCACCCTCTGGTCGCTTTACAACAATAACAACAACAACAGCCCCCAACCGGACCTTGAGCCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTCACGCACGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCGTCCCGCCCCGCCTCGCCCCGCGACCACCTGCACTCGCCGCCACAGCACCGCCACAGCCGCCGGGACGCCACGTCACCGCCACAGATCAACGGCATGCCTAATACTAATGGTGTCAATGGAGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAGCTAGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGTGTACTCTTCCCCTCAGGCAACGGTCAGAACGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQGPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSLTHGGKREACRSPAPPAKRRTPRPASRPASPRDHLHSPPQHRHSRRDATSPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -